Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 4.6e-121 438.0 230 100.0
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 5.2e-72 275.0 226 64.2
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 8.3e-70 267.7 233 62.7
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 1.8e-69 266.5 232 61.2
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 3.1e-69 265.8 225 64.0
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 3.1e-69 265.8 233 62.2
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 7.0e-69 264.6 233 62.2
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 7.7e-68 261.2 227 63.9
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 7.7e-68 261.2 227 63.4
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 1.0e-67 260.8 222 61.7
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 2.3e-67 259.6 220 64.1
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 6.6e-67 258.1 225 63.6
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 1.1e-66 257.3 226 58.8
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 2.5e-66 256.1 223 62.3
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 4.2e-66 255.4 227 60.4
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 9.5e-66 254.2 225 62.2
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 8.0e-65 251.1 239 61.5
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 7.5e-63 244.6 227 57.7
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 2.2e-62 243.0 232 59.1
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 2.8e-62 242.7 225 57.8
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 2.8e-62 242.7 227 56.8
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 6.3e-62 241.5 223 56.5
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 2.0e-60 236.5 225 55.1
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 4.5e-60 235.3 227 54.6
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 7.8e-60 234.6 224 56.2
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 6.6e-59 231.5 229 56.8
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 8.6e-59 231.1 227 54.6
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.9e-58 229.9 233 57.5
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 3.3e-58 229.2 233 54.9
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 7.3e-58 228.0 233 55.8
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 4.7e-57 225.3 212 54.7
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 1.8e-56 223.4 232 55.2
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 2.3e-56 223.0 229 55.5
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 1.5e-55 220.3 216 55.6
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 9.8e-55 217.6 221 56.6
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 2.9e-54 216.1 225 52.9
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 2.9e-54 216.1 218 50.9
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 4.9e-54 215.3 228 51.8
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 5.4e-53 211.8 218 51.4
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 7.0e-53 211.5 217 52.1
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 2.7e-52 209.5 180 60.0
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 2.7e-52 209.5 180 59.4
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 1.3e-51 207.2 217 51.2
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 1.7e-51 206.8 217 51.2
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 1.7e-51 206.8 217 53.0
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 1.7e-51 206.8 219 53.0
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 1.7e-51 206.8 219 53.0
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 1.1e-50 204.1 217 50.7
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 1.1e-50 204.1 217 50.7
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 1.5e-50 203.8 179 60.9
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 2.5e-50 203.0 219 52.1
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 1.2e-49 200.7 215 52.6
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 2.8e-49 199.5 216 51.9
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 4.7e-49 198.7 143 72.7
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 2.0e-47 193.4 218 50.5
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 8.3e-46 188.0 197 50.8
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 5.1e-43 178.7 162 59.9
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 3.1e-40 169.5 172 54.7
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 4.0e-40 169.1 163 62.6
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 1.3e-38 164.1 172 50.6
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 1.9e-37 160.2 164 51.8
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 7.1e-37 158.3 201 43.3
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 1.1e-32 144.4 116 66.4
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 3.8e-30 136.0 233 36.9
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 1.6e-25 120.6 106 57.5
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 8.1e-25 118.2 206 36.9
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 5.3e-24 115.5 136 52.9
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 7.1e-21 105.1 98 57.1
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 2.3e-19 100.1 189 32.8
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 2.1e-17 93.6 161 37.3
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 2.0e-15 87.0 127 42.5
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 1.7e-14 84.0 119 39.5
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 2.2e-14 83.6 201 29.9
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 2.2e-14 83.6 201 29.9
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 2.9e-14 83.2 68 66.2
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 4.9e-14 82.4 171 34.5
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 1.2e-12 77.8 64 65.6
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.5e-10 70.9 123 33.3
Cfa002814 Carpinus fangiana HOM05D007934 ORTHO05D010067 8.1e-09 65.1 52 69.2


User provided reference genes

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