Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 5.4e-300 1033.5 495 100.0
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 4.5e-299 1030.4 495 99.6
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 1.9e-268 928.7 495 88.9
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 1.1e-265 919.5 495 88.3
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 1.6e-256 889.0 576 76.2
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 3.0e-250 868.2 496 82.9
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 1.1e-249 866.3 496 82.7
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 1.8e-247 859.0 495 81.8
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 3.8e-245 851.3 495 81.8
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 3.8e-245 851.3 495 80.4
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 4.9e-245 850.9 495 81.8
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 6.4e-245 850.5 495 80.4
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 8.4e-245 850.1 495 81.2
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 2.4e-244 848.6 495 80.6
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 1.2e-243 846.3 495 80.4
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 6.0e-243 844.0 499 80.8
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 3.0e-242 841.6 496 80.2
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 3.9e-242 841.3 495 79.6
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 8.7e-242 840.1 495 80.4
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 1.5e-241 839.3 495 78.2
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 1.9e-241 839.0 495 79.4
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.9e-241 839.0 495 80.0
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 1.9e-241 839.0 495 79.8
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 1.9e-241 839.0 531 75.7
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 2.5e-241 838.6 495 79.8
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 3.3e-241 838.2 495 79.6
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 5.6e-241 837.4 496 80.6
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 6.2e-240 833.9 495 80.0
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 8.1e-240 833.6 495 79.2
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 1.4e-239 832.8 495 79.0
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 1.8e-239 832.4 496 79.4
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.8e-239 832.4 495 79.2
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 2.4e-239 832.0 510 78.8
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 3.1e-239 831.6 495 79.0
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 5.3e-239 830.9 495 79.6
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 5.8e-238 827.4 496 79.0
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 5.8e-238 827.4 495 78.0
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 2.2e-237 825.5 495 78.0
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 2.2e-237 825.5 496 78.8
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 2.2e-237 825.5 495 78.8
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 3.8e-237 824.7 495 78.0
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 6.4e-237 823.9 495 78.4
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 8.4e-237 823.5 495 78.8
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 1.4e-236 822.8 495 77.8
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 1.4e-236 822.8 498 77.9
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 1.9e-236 822.4 495 79.2
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 2.7e-235 818.5 496 78.2
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 1.0e-234 816.6 495 78.4
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 3.0e-234 815.1 495 78.2
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 3.9e-234 814.7 495 77.4
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 6.7e-234 813.9 520 75.8
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 8.7e-234 813.5 496 77.8
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 1.1e-233 813.1 495 76.8
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.5e-233 812.8 481 79.4
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 7.4e-233 810.4 495 77.8
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 9.6e-233 810.1 496 77.8
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.3e-232 809.7 496 77.8
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 1.3e-232 809.7 496 78.4
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 1.6e-232 809.3 495 77.8
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 3.7e-232 808.1 497 75.9
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 3.7e-232 808.1 495 77.6
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 1.8e-231 805.8 495 76.0
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 5.3e-231 804.3 484 78.7
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 5.3e-231 804.3 472 80.9
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 2.0e-230 802.4 500 76.8
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 2.2e-229 798.9 498 76.9
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 8.4e-229 797.0 497 75.7
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 1.6e-227 792.7 590 66.4
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 4.6e-227 791.2 495 75.6
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 4.6e-227 791.2 496 75.0
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 6.0e-227 790.8 495 74.9
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 1.8e-226 789.3 495 75.6
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.5e-225 786.2 484 77.1
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 1.9e-225 785.8 501 74.5
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 2.1e-224 782.3 495 75.2
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 6.9e-223 777.3 499 73.7
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 2.6e-222 775.4 495 75.4
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 5.9e-222 774.2 579 65.8
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 8.5e-221 770.4 497 74.0
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 4.2e-220 768.1 496 72.8
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 2.1e-219 765.8 495 74.7
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 1.3e-218 763.1 495 72.9
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 5.1e-218 761.1 496 72.6
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 1.9e-217 759.2 495 72.3
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 3.3e-217 758.4 495 71.9
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 1.6e-216 756.1 495 71.7
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 6.3e-216 754.2 495 71.9
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 1.4e-215 753.1 495 71.5
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 9.1e-215 750.4 495 71.1
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 1.2e-214 750.0 495 71.9
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 1.2e-214 750.0 411 85.2
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 1.5e-214 749.6 495 70.7
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 1.5e-214 749.6 495 70.7
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 1.0e-213 746.9 495 71.1
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 1.7e-213 746.1 411 84.7
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 8.5e-213 743.8 495 70.3
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 8.5e-213 743.8 495 70.5
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 1.0e-210 736.9 519 67.8
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 3.7e-208 728.4 552 65.0
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 3.7e-208 728.4 584 62.5
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 6.9e-207 724.2 495 70.3
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 2.9e-205 718.8 609 59.9
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 4.4e-201 704.9 463 73.7
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 3.7e-200 701.8 504 67.3
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 7.0e-199 697.6 519 65.5
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 1.1e-188 663.7 374 83.7
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 2.7e-187 659.1 444 70.5
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 4.8e-184 648.3 411 73.2
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 3.5e-182 642.1 360 83.9
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 3.5e-182 642.1 499 61.3
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 2.9e-181 639.0 500 62.2
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 4.7e-179 631.7 384 76.0
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 3.0e-178 629.0 507 58.6
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 2.6e-177 625.9 384 75.5
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 7.3e-172 607.8 327 88.1
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 3.7e-168 595.5 353 79.3
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.6e-166 590.1 327 84.4
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 6.6e-165 584.7 327 83.8
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 2.8e-163 579.3 531 55.6
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 3.3e-156 555.8 328 80.5
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 2.8e-147 526.2 333 76.0
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 8.1e-147 524.6 324 76.9
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 1.8e-146 523.5 351 72.9
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 3.1e-146 522.7 360 70.0
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 7.1e-143 511.5 311 77.2
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 3.3e-132 476.1 327 71.6
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 9.7e-108 394.8 222 81.1
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 3.8e-104 382.9 506 41.5
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 7.2e-103 378.6 384 49.2
Ca_29817_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 3.4e-97 359.8 211 82.0
PRCOL_00003583 Prasinoderma coloniale HOM05D004862 ORTHO05D005841 4.4e-92 342.8 446 43.5
unitig_26.g9584 Utricularia gibba HOM05D004862 ORTHO05D005841 5.7e-92 342.4 243 66.3
Ca_25384_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 9.1e-82 308.5 187 80.2
CsaV3_7G015000 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.0e-80 302.8 159 86.8
CsaV3_UNG187480 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.0e-80 302.8 159 86.8
CsaV3_7G014960 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.3e-77 293.9 159 85.5
unitig_26.g9585 Utricularia gibba HOM05D004862 ORTHO05D005841 4.0e-69 266.5 145 82.1
Cfa021801 Carpinus fangiana HOM05D004862 ORTHO05D005841 2.0e-57 227.6 381 34.9
CsaV3_UNG197500 Cucumis sativus L. HOM05D004862 ORTHO05D005841 7.3e-47 192.6 106 84.0
Ca_31280_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 5.2e-45 186.4 106 81.1
CsaV3_7G014970 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.6e-44 184.1 94 90.4
CsaV3_7G015010 Cucumis sativus L. HOM05D004862 ORTHO05D005841 7.5e-44 182.6 93 90.3
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis HOM05D004862 ORTHO05D005841 8.6e-40 169.1 154 51.9
BolC2t11379H Brassica oleracea HOM05D004862 ORTHO05D005841 7.3e-39 166.0 119 69.7
Potri.003G022650 Populus trichocarpa HOM05D004862 ORTHO05D005841 1.7e-35 154.8 91 80.2
Actinidia00239 Actinidia chinensis HOM05D004862 ORTHO05D005841 2.1e-30 137.9 87 75.9
TAR628G0087 Trochodendron aralioides HOM05D004862 ORTHO05D005841 1.4e-26 125.2 77 74.0
Potri.003G022701 Populus trichocarpa HOM05D004862 ORTHO05D005841 4.0e-21 107.1 76 65.8
CsaV3_7G014950 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.1e-18 99.0 65 66.2
Cfa010153 Carpinus fangiana HOM05D004862 ORTHO05D005841 9.3e-18 95.9 70 67.1
unitig_26.g9586 Utricularia gibba HOM05D004862 ORTHO05D005841 1.1e-15 89.0 69 65.2
Dinv28090 Davidia involucrata HOM05D000259 ORTHO05D000155 7.3e-15 86.3 122 42.6
MCO05G371 Micromonas commoda HOM05D004862 ORTHO05D267887 1.9e-07 61.6 130 34.6


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