Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014498 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D009378 1.7e-139 499.2 236 100.0
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 1.6e-28 130.6 168 42.3
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 4.4e-26 122.5 101 56.4
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 8.3e-25 118.2 146 39.7
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 6.6e-22 108.6 137 42.3
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 8.1e-20 101.7 130 40.8
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 1.8e-19 100.5 174 33.3
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 4.0e-19 99.4 139 38.1
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 4.0e-19 99.4 146 37.7
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 1.2e-18 97.8 146 37.0
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 2.0e-18 97.1 144 36.8
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 2.0e-18 97.1 143 39.9
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 4.4e-18 95.9 149 36.2
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 4.4e-18 95.9 126 41.3
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 7.5e-18 95.1 119 42.9
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 9.8e-18 94.7 146 37.0
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 1.3e-17 94.4 138 35.5
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 2.9e-17 93.2 147 34.0
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 2.9e-17 93.2 151 35.1
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 3.7e-17 92.8 142 36.6
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 1.1e-16 91.3 156 34.6
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 1.9e-16 90.5 136 37.5
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 1.9e-16 90.5 136 36.0
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 1.9e-16 90.5 136 37.5
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.9e-16 90.5 154 34.4
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 2.4e-16 90.1 141 35.5
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 2.4e-16 90.1 141 35.5
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 7.1e-16 88.6 140 35.0
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 7.1e-16 88.6 147 34.7
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 7.1e-16 88.6 150 32.0
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 1.2e-15 87.8 127 37.0
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 1.2e-15 87.8 78 47.4
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 1.6e-15 87.4 148 33.8
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 1.3e-14 84.3 145 35.2
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 1.7e-14 84.0 78 48.7
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 1.7e-14 84.0 141 34.8
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 2.3e-14 83.6 105 44.8
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 3.0e-14 83.2 161 31.1
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 3.0e-14 83.2 146 32.9
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 3.9e-14 82.8 80 48.8
Nitab4.5_0001478g0160 Nicotiana tabacum HOM05D003067 ORTHO05D009378 8.6e-14 81.6 99 41.4
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 8.6e-14 81.6 148 32.4
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 1.5e-13 80.9 145 33.1
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 2.5e-13 80.1 67 50.7
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 2.5e-13 80.1 150 32.7
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 5.6e-13 79.0 63 54.0
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 9.5e-13 78.2 101 40.6
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 1.2e-12 77.8 145 32.4
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 4.7e-12 75.9 150 32.7
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 1.1e-11 74.7 149 30.2
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 1.8e-11 73.9 83 43.4
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 2.3e-11 73.6 140 32.9
MD02G1010100 Malus domestica HOM05D003067 ORTHO05D009378 3.1e-11 73.2 120 35.0
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 4.0e-11 72.8 152 29.6
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 2.6e-10 70.1 140 32.9
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 4.9e-09 65.9 139 33.8
Nitab4.5_0000525g0300 Nicotiana tabacum HOM05D003067 ORTHO05D009378 6.4e-09 65.5 143 33.6
Nitab4.5_0008862g0010 Nicotiana tabacum HOM05D003067 ORTHO05D009378 6.4e-09 65.5 81 37.0
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 6.4e-09 65.5 126 31.7
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 1.9e-08 63.9 136 30.9
SGA_v2.0_scaffold113G31772 Striga asiatica HOM05D003067 ORTHO05D009378 7.1e-08 62.0 102 33.3
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 9.2e-08 61.6 156 28.8
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 2.1e-07 60.5 126 30.2
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 2.7e-07 60.1 156 28.2
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 2.7e-07 60.1 156 28.2
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 4.6e-07 59.3 156 28.2
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 4.6e-07 59.3 156 28.2
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 4.6e-07 59.3 132 31.1
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 7.8e-07 58.5 156 28.2
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 1.3e-06 57.8 71 39.4


User provided reference genes

Program Settings