Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014495 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 1.7e-70 269.2 136 100.0
Sabra13G0011000 Salix brachista HOM05D006169 ORTHO05D007698 4.6e-28 128.3 125 60.0
Dinv24403 Davidia involucrata HOM05D006169 ORTHO05D007698 1.0e-27 127.1 123 62.6
Hma1.2p1_1441F.1_g283670 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 3.0e-27 125.6 114 64.9
Hma1.2p1_1441F.1_g283680 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 3.0e-27 125.6 114 64.9
Haze_04109 Corylus avellana HOM05D006169 ORTHO05D007698 9.7e-26 120.6 109 59.6
Sabra13G0011100 Salix brachista HOM05D006169 ORTHO05D007698 4.8e-25 118.2 125 56.0
PSO832G1922 Papaver somniferum HOM05D006169 ORTHO05D007698 1.4e-24 116.7 109 60.6
PSO210G0761 Papaver somniferum HOM05D006169 ORTHO05D007698 1.2e-23 113.6 109 59.6
Actinidia02688 Actinidia chinensis HOM05D006169 ORTHO05D007698 1.5e-23 113.2 117 61.5
Aqoxy5G00801 Aquilegia oxysepala HOM05D006169 ORTHO05D007698 1.5e-23 113.2 124 57.3
Potri.013G012400 Populus trichocarpa HOM05D006169 ORTHO05D007698 2.0e-23 112.8 123 55.3
Ciclev10001820m.g Citrus clementina HOM05D006169 ORTHO05D007698 4.5e-23 111.7 125 58.4
Manes.08G114800 Manihot esculenta HOM05D006169 ORTHO05D007698 5.9e-23 111.3 122 53.3
QL03p019145 Quercus lobata HOM05D006169 ORTHO05D007698 5.9e-23 111.3 115 55.7
CiPaw.08G158800 Carya illinoinensis HOM05D006169 ORTHO05D007698 7.6e-23 110.9 114 57.9
GSVIVG01031157001 Vitis vinifera HOM05D006169 ORTHO05D007698 2.9e-22 109.0 117 55.6
Oeu048884.1 Olea europaea HOM05D006169 ORTHO05D007698 5.0e-22 108.2 112 59.8
FvH4_6g06920 Fragaria vesca HOM05D006169 ORTHO05D007698 8.5e-22 107.5 121 52.9
FAN05G4461 Fragaria x ananassa HOM05D006169 ORTHO05D007698 8.5e-22 107.5 122 53.3
RcHm_v2.0_Chr3g0456451 Rosa chinensis HOM05D006169 ORTHO05D007698 8.5e-22 107.5 130 52.3
THA.LOC104802790 Tarenaya hassleriana HOM05D006169 ORTHO05D007698 8.5e-22 107.5 96 62.5
FAN09G1827 Fragaria x ananassa HOM05D006169 ORTHO05D007698 1.1e-21 107.1 104 56.7
MBI18_g25080_MAGBIO Magnolia biondii HOM05D006169 ORTHO05D007698 1.9e-21 106.3 124 54.8
MSTRG.5122 Avicennia marina HOM05D006169 ORTHO05D007698 2.5e-21 105.9 115 59.1
Peaxi162Scf00484g00066 Petunia axillaris HOM05D006169 ORTHO05D007698 3.2e-21 105.5 115 55.7
Cfa006660 Carpinus fangiana HOM05D006169 ORTHO05D007698 4.2e-21 105.1 108 56.5
Lj9C200T3 Lonicera japonica HOM05D006169 ORTHO05D007698 4.2e-21 105.1 115 57.4
PGR031G2380 Punica granatum HOM05D006169 ORTHO05D007698 7.2e-21 104.4 119 54.6
SalBow3G0569 Salvia bowleyana HOM05D006169 ORTHO05D007698 1.2e-20 103.6 98 63.3
CANSAT54G3053 Cannabis sativa HOM05D006169 ORTHO05D007698 1.6e-20 103.2 109 56.0
AL3G16270 Arabidopsis lyrata HOM05D006169 ORTHO05D007698 2.1e-20 102.8 81 66.7
MD04G1197600 Malus domestica HOM05D006169 ORTHO05D007698 2.1e-20 102.8 104 55.8
Aa31LG5G16050 Aethionema arabicum HOM05D006169 ORTHO05D007698 2.7e-20 102.4 81 64.2
AT3G05625 Arabidopsis thaliana HOM05D006169 ORTHO05D007698 2.7e-20 102.4 81 66.7
Glyma.10G150300 Glycine max HOM05D006169 ORTHO05D007698 3.6e-20 102.1 66 71.2
Eucgr.L02153 Eucalyptus grandis HOM05D006169 ORTHO05D007698 4.6e-20 101.7 119 52.9
Cpa.g.sc48.120 Carica papaya HOM05D006169 ORTHO05D007698 6.1e-20 101.3 122 52.5
unitig_0.g2320 Utricularia gibba HOM05D006169 ORTHO05D007698 7.9e-20 100.9 85 62.4
Hund07115 Selenicereus undatus HOM05D006169 ORTHO05D007698 2.3e-19 99.4 129 46.5
Sc14g0006600 Simmondsia chinensis HOM05D006169 ORTHO05D007698 2.3e-19 99.4 106 54.7
Cc02_g34500 Coffea canephora HOM05D006169 ORTHO05D007698 3.0e-19 99.0 117 53.0
CARHR080070 Cardamine hirsuta HOM05D006169 ORTHO05D007698 3.9e-19 98.6 81 64.2
Psat6g151520 Pisum sativum HOM05D006169 ORTHO05D007698 5.1e-19 98.2 104 55.8
Nn3g21567 Nelumbo nucifera HOM05D006169 ORTHO05D007698 6.7e-19 97.8 96 56.2
Prupe.6G318000 Prunus persica HOM05D006169 ORTHO05D007698 8.8e-19 97.4 125 48.8
Rhsim05G0136600 Rhododendron simsii HOM05D006169 ORTHO05D007698 8.8e-19 97.4 90 57.8
Eucgr.H03261 Eucalyptus grandis HOM05D006169 ORTHO05D007698 1.1e-18 97.1 122 49.2
TWI56G0200 Tripterygium wilfordii HOM05D006169 ORTHO05D007698 1.1e-18 97.1 120 48.3
AUR62000726 Chenopodium quinoa HOM05D006169 ORTHO05D007698 1.5e-18 96.7 122 50.0
Ah.04g161300 Amaranthus hybridus HOM05D006169 ORTHO05D007698 1.9e-18 96.3 65 72.3
CAN.G813.8 Capsicum annuum HOM05D006169 ORTHO05D007698 1.9e-18 96.3 124 52.4
Ca_10150_v3 Cicer arietinum L. HOM05D006169 ORTHO05D007698 1.9e-18 96.3 106 51.9
ClCG02G015230 Citrullus lanatus HOM05D006169 ORTHO05D007698 1.9e-18 96.3 111 55.0
CsaV3_2G006780 Cucumis sativus L. HOM05D006169 ORTHO05D007698 1.9e-18 96.3 118 52.5
Carub.0003s0495 Capsella rubella HOM05D006169 ORTHO05D007698 2.5e-18 95.9 81 61.7
Eucgr.H04522 Eucalyptus grandis HOM05D006169 ORTHO05D007698 4.3e-18 95.1 123 49.6
Lj5g0023338 Lotus japonicus HOM05D006169 ORTHO05D007698 4.3e-18 95.1 115 48.7
Thecc.05G316900 Theobroma cacao HOM05D006169 ORTHO05D007698 4.3e-18 95.1 118 51.7
Atru.chr5.1841 Acer truncatum HOM05D006169 ORTHO05D007698 5.7e-18 94.7 124 50.8
MELO3C004212.2 Cucumis melo HOM05D006169 ORTHO05D007698 7.4e-18 94.4 111 55.0
Nitab4.5_0001266g0050 Nicotiana tabacum HOM05D006169 ORTHO05D007698 7.4e-18 94.4 124 50.8
arahy.Tifrunner.gnm1.ann1.NVQ69B Arachis hypogaea HOM05D006169 ORTHO05D007698 9.7e-18 94.0 105 52.4
EL10Ac4g09881 Beta vulgaris HOM05D006169 ORTHO05D007698 9.7e-18 94.0 117 48.7
arahy.Tifrunner.gnm1.ann1.X8FEVW Arachis hypogaea HOM05D006169 ORTHO05D007698 1.7e-17 93.2 107 51.4
COL.COLO4_10563 Corchorus olitorius HOM05D006169 ORTHO05D007698 1.7e-17 93.2 118 53.4
Thhalv10021364m.g Eutrema salsugineum HOM05D006169 ORTHO05D007698 1.7e-17 93.2 66 68.2
Gohir.A11G270300 Gossypium hirsutum HOM05D006169 ORTHO05D007698 1.7e-17 93.2 117 52.1
BcaB04g19252 Brassica carinata HOM05D006169 ORTHO05D007698 2.2e-17 92.8 79 58.2
Migut.N02103 Erythranthe guttata HOM05D006169 ORTHO05D007698 2.2e-17 92.8 114 52.6
Lsat_1_v5_gn_7_73300 Lactuca sativa HOM05D006169 ORTHO05D007698 2.2e-17 92.8 97 55.7
Medtr1g083600 Medicago truncatula HOM05D006169 ORTHO05D007698 2.2e-17 92.8 109 50.5
BolC3t16445H Brassica oleracea HOM05D006169 ORTHO05D007698 2.8e-17 92.4 75 60.0
Sp3g04510 Schrenkiella parvula HOM05D006169 ORTHO05D007698 3.7e-17 92.0 79 62.0
VMungo0720G2022 Vigna mungo HOM05D006169 ORTHO05D007698 4.8e-17 91.7 108 50.0
BcaB04g19253 Brassica carinata HOM05D006169 ORTHO05D007698 6.3e-17 91.3 67 61.2
ClCG00G004550 Citrullus lanatus HOM05D006169 ORTHO05D007698 6.3e-17 91.3 126 49.2
C03p41640 Brassica napus HOM05D006169 ORTHO05D007698 8.2e-17 90.9 79 58.2
Gorai.007G302700 Gossypium raimondii HOM05D006169 ORTHO05D007698 8.2e-17 90.9 117 51.3
Lalb_Chr06g0167751 Lupinus albus HOM05D006169 ORTHO05D007698 1.4e-16 90.1 94 54.3
Phvul.007G198500 Phaseolus vulgaris HOM05D006169 ORTHO05D007698 1.8e-16 89.7 106 51.9
Duzib177G0247 Durio zibethinus HOM05D006169 ORTHO05D007698 4.1e-16 88.6 119 53.8
A03p34240 Brassica napus HOM05D006169 ORTHO05D007698 5.3e-16 88.2 63 66.7
BraA03t12598Z Brassica rapa HOM05D006169 ORTHO05D007698 5.3e-16 88.2 63 66.7
HPP92_016954 Vanilla planifolia HOM05D006169 ORTHO05D007698 5.3e-16 88.2 64 67.2
BcaB04g19251 Brassica carinata HOM05D006169 ORTHO05D007698 6.9e-16 87.8 81 56.8
DCAR_029375 Daucus carota HOM05D006169 ORTHO05D007698 6.9e-16 87.8 115 48.7
Sed0028110 Sechium edule HOM05D006169 ORTHO05D007698 6.9e-16 87.8 117 45.3
HanXRQChr06g0182151 Helianthus annuus HOM05D006169 ORTHO05D007698 9.1e-16 87.4 123 48.0
Gohir.D11G280500 Gossypium hirsutum HOM05D006169 ORTHO05D007698 1.2e-15 87.0 116 50.0
Os01g0343500 Oryza sativa ssp. japonica HOM05D006169 ORTHO05D007698 1.5e-15 86.7 68 61.8
SGA_v2.0_scaffold81G26108 Striga asiatica HOM05D006169 ORTHO05D007698 7.7e-15 84.3 109 51.4
ECA236G4200 Erigeron canadensis HOM05D006169 ORTHO05D007698 1.0e-14 84.0 101 52.5
CDE05G1145 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 1.1e-13 80.5 131 40.5
HPP92_016950 Vanilla planifolia HOM05D006169 ORTHO05D007698 1.4e-13 80.1 66 62.1
Zm00001eb340780 Zea mays HOM05D006169 ORTHO05D007698 2.5e-13 79.3 113 44.2
TAR365G0132 Trochodendron aralioides HOM05D002548 ORTHO05D003031 2.7e-12 75.9 80 57.5
ATR0693G261 Amborella trichopoda HOM05D006169 ORTHO05D007698 3.6e-12 75.5 63 61.9
Solyc10g044710.2 Solanum lycopersicum HOM05D006169 ORTHO05D007698 4.7e-12 75.1 65 61.5
Sopen10g013390 Solanum pennellii HOM05D006169 ORTHO05D007698 4.7e-12 75.1 65 61.5
SEGI_23594 Sequoiadendron giganteum HOM05D006169 ORTHO05D007698 2.0e-10 69.7 83 48.2
Pp3c1_33190 Physcomitrium patens HOM05D006169 ORTHO05D007698 2.6e-07 59.3 41 68.3
Actinidia19770 Actinidia chinensis HOM05D006169 ORTHO05D007698 5.9e-07 58.2 31 83.9
AagrBONN_evm.TU.Sc2ySwM_344.2014 Anthoceros agrestis HOM05D006169 ORTHO05D007698 2.2e-06 56.2 47 59.6


User provided reference genes

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