Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014452 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D014293 4.9e-222 774.2 415 100.0
CSS0040255 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D014293 1.9e-117 426.8 394 66.8
Actinidia07154 Actinidia chinensis HOM05D001944 ORTHO05D002405 2.4e-112 409.8 399 61.7
Actinidia24118 Actinidia chinensis HOM05D001944 ORTHO05D002405 3.9e-110 402.5 400 61.8
Dinv01067 Davidia involucrata HOM05D001944 ORTHO05D002405 4.6e-95 352.4 400 59.0
Actinidia20443 Actinidia chinensis HOM05D001944 ORTHO05D014293 6.2e-92 342.0 333 62.8
Dinv32718 Davidia involucrata HOM05D001944 ORTHO05D002405 1.6e-68 264.2 382 49.2
TAR623G0602 Trochodendron aralioides HOM05D001944 ORTHO05D002405 3.7e-68 263.1 406 49.0
Actinidia03718 Actinidia chinensis HOM05D000550 ORTHO05D000400 1.1e-64 251.5 355 51.3
Rhsim13G0096400 Rhododendron simsii HOM05D001944 ORTHO05D002405 1.1e-56 224.9 300 54.0
GSVIVG01025216001 Vitis vinifera HOM05D001944 ORTHO05D002405 4.7e-55 219.5 401 43.4
Hma1.2p1_0058F.1_g032355 Hydrangea macrophylla HOM05D001944 ORTHO05D014293 1.6e-50 204.5 341 44.9
Rhsim01G0215200 Rhododendron simsii HOM05D001944 ORTHO05D014293 5.5e-48 196.1 217 59.0
vmacro03215 Vaccinium macrocarpon HOM05D001944 ORTHO05D002405 2.7e-47 193.7 298 49.7
TAR636G3431 Trochodendron aralioides HOM05D001944 ORTHO05D002405 5.9e-42 176.0 412 39.8
TWI79G1706 Tripterygium wilfordii HOM05D001944 ORTHO05D002405 1.9e-40 171.0 410 38.0
vmacro14420 Vaccinium macrocarpon HOM05D001944 ORTHO05D014293 4.0e-38 163.3 182 57.7
Cfa011296 Carpinus fangiana HOM05D001944 ORTHO05D002405 5.2e-38 162.9 406 38.2
Haze_23776 Corylus avellana HOM05D001944 ORTHO05D014293 1.2e-37 161.8 405 38.0
TWI31G0996 Tripterygium wilfordii HOM05D001944 ORTHO05D002405 8.3e-36 155.6 398 35.4
Prupe.6G104600 Prunus persica HOM05D001944 ORTHO05D002405 5.4e-35 152.9 405 36.5
TAR633G2605 Trochodendron aralioides HOM05D001944 ORTHO05D002405 2.7e-34 150.6 413 36.8
Nn2g13727 Nelumbo nucifera HOM05D001944 ORTHO05D002405 1.8e-27 127.9 412 34.2
FvH4_3g31740 Fragaria vesca HOM05D001944 ORTHO05D002405 5.0e-25 119.8 211 44.5
FAN11G3960 Fragaria x ananassa HOM05D001944 ORTHO05D002405 5.0e-25 119.8 211 44.5
TAR369G0775 Trochodendron aralioides HOM05D001944 ORTHO05D002405 6.6e-25 119.4 287 38.7
Sc21g0003900 Simmondsia chinensis HOM05D001944 ORTHO05D002405 8.6e-25 119.0 294 40.1
Lj2C1021G5 Lonicera japonica HOM05D001944 ORTHO05D002405 1.5e-24 118.2 388 34.0
Nn2g11517 Nelumbo nucifera HOM05D001944 ORTHO05D002405 2.5e-24 117.5 410 33.9
FAN21G2742 Fragaria x ananassa HOM05D001944 ORTHO05D002405 7.3e-24 115.9 211 44.1
Rhsim03G0086900 Rhododendron simsii HOM05D001944 ORTHO05D014293 7.3e-24 115.9 217 41.5
CiPaw.14G085200 Carya illinoinensis HOM05D001944 ORTHO05D002405 9.5e-24 115.5 434 31.3
FAN25G3826 Fragaria x ananassa HOM05D001944 ORTHO05D002405 9.5e-24 115.5 211 44.1
CAN.G171.6 Capsicum annuum HOM05D001944 ORTHO05D002405 2.8e-23 114.0 417 32.1
Peaxi162Scf00167g00092 Petunia axillaris HOM05D001944 ORTHO05D002405 3.6e-23 113.6 400 33.2
Oeu056301.1 Olea europaea HOM05D001944 ORTHO05D002405 6.1e-23 112.8 401 32.7
Cc01_g10870 Coffea canephora HOM05D001944 ORTHO05D002405 1.0e-22 112.1 243 42.0
MD03G1121600 Malus domestica HOM05D001944 ORTHO05D002405 3.0e-22 110.5 399 34.8
ClCG03G002980 Citrullus lanatus HOM05D001944 ORTHO05D002405 1.5e-21 108.2 422 29.1
Potri.004G212700 Populus trichocarpa HOM05D001944 ORTHO05D002405 1.5e-21 108.2 203 46.8
Cpa.g.sc311.5 Carica papaya HOM05D001944 ORTHO05D014293 3.4e-21 107.1 401 33.4
RcHm_v2.0_Chr5g0058411 Rosa chinensis HOM05D001944 ORTHO05D002405 7.5e-21 105.9 167 47.3
MD11G1139900 Malus domestica HOM05D001944 ORTHO05D002405 2.9e-20 104.0 406 32.8
Nitab4.5_0006619g0010 Nicotiana tabacum HOM05D001944 ORTHO05D002405 2.9e-20 104.0 399 33.1
Hma1.2p1_0058F.1_g032350 Hydrangea macrophylla HOM05D001944 ORTHO05D011318 8.3e-20 102.4 261 36.0
Aqoxy1G01204 Aquilegia oxysepala HOM05D001944 ORTHO05D002405 1.1e-19 102.1 425 32.7
Potri.005G010133 Populus trichocarpa HOM05D001944 ORTHO05D002405 2.4e-19 100.9 224 41.5
Manes.03G122401 Manihot esculenta HOM05D001944 ORTHO05D002405 4.1e-19 100.1 402 31.1
FAN16G2569 Fragaria x ananassa HOM05D001944 ORTHO05D002405 2.0e-18 97.8 190 41.1
CsaV3_1G013920 Cucumis sativus L. HOM05D001944 ORTHO05D002405 1.7e-17 94.7 414 30.2
Glyma.12G175400 Glycine max HOM05D001944 ORTHO05D002405 3.9e-17 93.6 172 48.3
Lj1P201T10 Lonicera japonica HOM05D001944 ORTHO05D014293 8.6e-17 92.4 178 44.9
Lsat_1_v5_gn_1_63980 Lactuca sativa HOM05D001944 ORTHO05D002405 3.3e-16 90.5 218 38.1
Sed0006438 Sechium edule HOM05D001944 ORTHO05D002405 3.3e-16 90.5 421 27.3
Solyc06g010240.3 Solanum lycopersicum HOM05D001944 ORTHO05D002405 3.3e-16 90.5 229 38.4
Sopen06g005090 Solanum pennellii HOM05D001944 ORTHO05D002405 5.6e-16 89.7 229 38.4
QL01p026747 Quercus lobata HOM05D001944 ORTHO05D002405 2.1e-15 87.8 408 31.6
Nitab4.5_0000181g0180 Nicotiana tabacum HOM05D001944 ORTHO05D002405 6.2e-15 86.3 396 30.8
Oeu002984.1 Olea europaea HOM05D001944 ORTHO05D002405 6.2e-15 86.3 454 27.5
Nitab4.5_0006532g0030 Nicotiana tabacum HOM05D001944 ORTHO05D002405 8.0e-15 85.9 182 41.2
Glyma.13G324500 Glycine max HOM05D001944 ORTHO05D002405 5.2e-14 83.2 230 39.6
Lj8C65T10 Lonicera japonica HOM05D001944 ORTHO05D014293 5.2e-14 83.2 117 48.7
Ciclev10027663m.g Citrus clementina HOM05D001944 ORTHO05D002405 2.6e-13 80.9 251 35.9
Potri.013G006000 Populus trichocarpa HOM05D001944 ORTHO05D002405 2.6e-13 80.9 404 31.7
Lj3g0013525 Lotus japonicus HOM05D001944 ORTHO05D002405 4.4e-13 80.1 181 39.2
Solyc11g069610.3 Solanum lycopersicum HOM05D001944 ORTHO05D002405 9.8e-13 79.0 183 41.0
MELO3C004905.2 Cucumis melo HOM05D001944 ORTHO05D002405 1.3e-12 78.6 415 28.4
Nitab4.5_0000602g0020 Nicotiana tabacum HOM05D001944 ORTHO05D002405 1.3e-12 78.6 182 38.5
MSTRG.17786 Avicennia marina HOM05D001944 ORTHO05D002405 2.2e-12 77.8 422 28.2
Sopen11g028320 Solanum pennellii HOM05D001944 ORTHO05D002405 2.2e-12 77.8 183 40.4
DCAR_022760 Daucus carota HOM05D001944 ORTHO05D002405 3.7e-12 77.0 288 31.6
Gorai.009G108800 Gossypium raimondii HOM05D001944 ORTHO05D002405 1.1e-11 75.5 391 30.2
Aqoxy7G00183 Aquilegia oxysepala HOM05D001944 ORTHO05D002405 3.2e-11 73.9 311 31.2
Gohir.D05G104800 Gossypium hirsutum HOM05D001944 ORTHO05D002405 4.1e-11 73.6 391 29.9
HanXRQChr01g0019301 Helianthus annuus HOM05D001944 ORTHO05D002405 4.1e-11 73.6 217 37.8
Dinv37298 Davidia involucrata HOM05D001944 ORTHO05D002405 1.6e-10 71.6 179 38.5
CAN.G631.45 Capsicum annuum HOM05D000550 ORTHO05D009781 4.6e-10 70.1 183 38.3
Sabra05G0007500 Salix brachista HOM05D001944 ORTHO05D002405 4.6e-10 70.1 230 36.5
Hund01491 Selenicereus undatus HOM05D001944 ORTHO05D002405 1.0e-09 68.9 418 30.1
ECA248G2414 Erigeron canadensis HOM05D001944 ORTHO05D002405 2.3e-09 67.8 180 37.8
Lalb_Chr24g0394751 Lupinus albus HOM05D001944 ORTHO05D002405 6.6e-09 66.2 354 30.8
VMungo1080G0782 Vigna mungo HOM05D001944 ORTHO05D002405 1.1e-08 65.5 172 39.5
Gohir.A05G105000 Gossypium hirsutum HOM05D001944 ORTHO05D002405 2.5e-08 64.3 391 28.9
Gohir.D08G216700 Gossypium hirsutum HOM05D001944 ORTHO05D002405 1.6e-07 61.6 126 39.7
Gorai.004G230500 Gossypium raimondii HOM05D001944 ORTHO05D002405 2.8e-07 60.8 126 39.7
Ca_01395_v3 Cicer arietinum L. HOM05D001944 ORTHO05D002405 6.2e-07 59.7 218 37.2
TPR.G11481 Trifolium pratense HOM05D001944 ORTHO05D002405 1.4e-06 58.5 418 28.2
MSTRG.12332 Avicennia marina HOM05D001944 ORTHO05D002405 2.3e-06 57.8 141 38.3
Thecc.09G343900 Theobroma cacao HOM05D001944 ORTHO05D002405 2.3e-06 57.8 404 27.5
Psat5g279720 Pisum sativum HOM05D001944 ORTHO05D002405 6.8e-06 56.2 403 29.0
SHI21812 Sapria himalayana HOM05D001944 ORTHO05D014293 8.9e-06 55.8 179 34.6


User provided reference genes

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