Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014448 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 8.7e-162 573.5 284 100.0
CSS0028595 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 1.1e-119 433.7 277 76.9
CSS0049846 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 1.8e-114 416.4 274 78.5
CSS0036293 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 5.2e-114 414.8 275 76.4
CSS0044758 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 1.3e-104 383.6 268 72.8
CSS0021922 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 2.3e-69 266.5 288 53.5
CSS0043392 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 2.8e-59 233.0 223 54.3
CSS0016753 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 4.8e-59 232.3 222 53.6
CSS0026430 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 2.4e-58 229.9 211 55.0
CSS0021965 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 9.0e-58 228.0 212 55.2
CSS0034888 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 2.2e-56 223.4 212 53.3
CSS0031415 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 2.3e-53 213.4 211 52.1
CSS0049832 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 1.8e-50 203.8 223 50.2
CSS0025772 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 1.1e-44 184.5 154 64.3
CSS0018264 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 2.5e-44 183.3 154 63.0
CSS0007065 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 9.6e-44 181.4 154 62.3
CSS0024495 Camellia sinensis var. sinensis HOM05D000132 ORTHO05D000058 9.6e-44 181.4 168 56.0
CSS0008770 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.8e-43 179.9 138 65.9
CSS0013817 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 1.0e-40 171.4 154 61.7
CSS0003582 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 1.1e-39 167.9 168 56.5
CSS0006552 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 3.2e-39 166.4 155 59.4
AUR62042972 Chenopodium quinoa HOM05D009273 ORTHO05D011122 6.0e-38 162.2 287 33.8
AUR62038327 Chenopodium quinoa HOM05D009273 ORTHO05D011122 4.3e-36 156.0 276 34.1
AUR62036961 Chenopodium quinoa HOM05D009273 ORTHO05D000589 1.3e-35 154.5 283 33.9
AUR62026412 Chenopodium quinoa HOM05D009273 ORTHO05D011122 6.3e-35 152.1 276 33.7
AUR62025784 Chenopodium quinoa HOM05D010410 ORTHO05D011122 3.9e-29 132.9 267 34.5
QL08p004401 Quercus lobata HOM05D000047 ORTHO05D000589 5.3e-26 122.5 165 35.8
CSS0045102 Camellia sinensis var. sinensis HOM05D028785 ORTHO05D008628 6.5e-24 115.5 75 72.0
CSS0033344 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 3.2e-23 113.2 69 72.5
CSS0036395 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 5.5e-23 112.5 69 71.0
CSS0043502 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 5.5e-23 112.5 69 72.5
CSS0026459 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 7.9e-22 108.6 69 69.6
Actinidia34913 Actinidia chinensis HOM05D000047 ORTHO05D000589 2.3e-21 107.1 312 21.2
AUR62037095 Chenopodium quinoa HOM05D009273 ORTHO05D011122 3.9e-21 106.3 287 26.8
TAR697G0001 Trochodendron aralioides HOM05D000047 ORTHO05D000589 2.0e-20 104.0 305 25.2
Sopen10g014590 Solanum pennellii HOM05D000047 ORTHO05D000589 1.2e-17 94.7 312 25.3
Sopen12g009930 Solanum pennellii HOM05D000047 ORTHO05D000589 1.2e-17 94.7 312 24.7
CSS0046152 Camellia sinensis var. sinensis HOM05D015870 ORTHO05D008628 1.5e-17 94.4 87 52.9
Sopen03g025670 Solanum pennellii HOM05D000047 ORTHO05D000589 1.5e-17 94.4 297 24.2
TPR.G35555 Trifolium pratense HOM05D000047 ORTHO05D000589 2.0e-17 94.0 296 26.4
Sopen10g024610 Solanum pennellii HOM05D000047 ORTHO05D000589 5.9e-17 92.4 293 24.2
AUR62041897 Chenopodium quinoa HOM05D009273 ORTHO05D011122 1.0e-16 91.7 289 27.0
Sopen12g012830 Solanum pennellii HOM05D000047 ORTHO05D000589 1.0e-16 91.7 293 24.2
Sopen04g014060 Solanum pennellii HOM05D000047 ORTHO05D000589 1.3e-16 91.3 295 23.7
Sopen07g022040 Solanum pennellii HOM05D000047 ORTHO05D000589 1.7e-16 90.9 293 24.6
CSS0008735 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 5.0e-16 89.4 56 66.1
Sopen09g009980 Solanum pennellii HOM05D000047 ORTHO05D000589 5.0e-16 89.4 293 23.5
Sopen10g019320 Solanum pennellii HOM05D000047 ORTHO05D000589 6.5e-16 89.0 293 23.5
Dinv10786 Davidia involucrata HOM05D000047 ORTHO05D000589 8.5e-16 88.6 116 38.8
Sopen03g009440 Solanum pennellii HOM05D000047 ORTHO05D000589 8.5e-16 88.6 297 23.6
Sopen04g006090 Solanum pennellii HOM05D000047 ORTHO05D000589 8.5e-16 88.6 293 23.9
CSS0008493 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 1.1e-15 88.2 56 66.1
Sopen07g016490 Solanum pennellii HOM05D000047 ORTHO05D000589 1.1e-15 88.2 293 23.5
Sopen03g009270 Solanum pennellii HOM05D000047 ORTHO05D000589 1.9e-15 87.4 292 24.0
Sopen03g015560 Solanum pennellii HOM05D000047 ORTHO05D000044 1.9e-15 87.4 280 23.9
Sopen05g029830 Solanum pennellii HOM05D000047 ORTHO05D000589 1.9e-15 87.4 295 23.7
TPR.G19305 Trifolium pratense HOM05D000047 ORTHO05D000589 4.2e-15 86.3 277 22.7
Sopen04g013610 Solanum pennellii HOM05D000047 ORTHO05D000589 5.5e-15 85.9 297 22.6
Sopen08g011490 Solanum pennellii HOM05D000047 ORTHO05D000044 5.5e-15 85.9 293 23.2
Sopen06g027270 Solanum pennellii HOM05D000047 ORTHO05D000589 7.2e-15 85.5 293 22.9
TPR.G18586 Trifolium pratense HOM05D002881 ORTHO05D000589 7.2e-15 85.5 285 22.5
TPR.G22842 Trifolium pratense HOM05D000047 ORTHO05D000044 7.2e-15 85.5 318 21.7
Sopen09g020400 Solanum pennellii HOM05D000047 ORTHO05D000589 9.4e-15 85.1 293 23.2
Sopen09g027920 Solanum pennellii HOM05D000047 ORTHO05D000589 9.4e-15 85.1 289 24.6
CSS0041198 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 1.6e-14 84.3 56 62.5
Sopen01g027730 Solanum pennellii HOM05D000047 ORTHO05D000044 2.1e-14 84.0 182 26.4
Sopen04g028470 Solanum pennellii HOM05D000047 ORTHO05D000589 2.7e-14 83.6 289 23.2
TPR.G35763 Trifolium pratense HOM05D000047 ORTHO05D000589 6.1e-14 82.4 333 21.3
CSS0009899 Camellia sinensis var. sinensis HOM05D015870 ORTHO05D008628 7.9e-14 82.0 81 53.1
AUR62042805 Chenopodium quinoa HOM05D009273 ORTHO05D011122 7.9e-14 82.0 335 23.0
Sopen00g006490 Solanum pennellii HOM05D000047 ORTHO05D000589 7.9e-14 82.0 284 23.9
PSO017G7178 Papaver somniferum HOM05D000047 ORTHO05D000589 1.0e-13 81.6 198 23.7
CSS0041107 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 1.4e-13 81.3 55 61.8
Sopen09g024650 Solanum pennellii HOM05D000047 ORTHO05D000589 1.8e-13 80.9 184 26.6
CSS0033110 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 5.2e-13 79.3 51 64.7
CSS0045513 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 5.2e-13 79.3 54 66.7
TPR.G17648 Trifolium pratense HOM05D000047 ORTHO05D000589 5.2e-13 79.3 316 22.8
CSS0048395 Camellia sinensis var. sinensis HOM05D015870 ORTHO05D008628 6.7e-13 79.0 70 57.1
Sopen12g016380 Solanum pennellii HOM05D000047 ORTHO05D000589 1.1e-12 78.2 190 27.9
CSS0006900 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 1.5e-12 77.8 51 64.7
Sopen12g026490 Solanum pennellii HOM05D000047 ORTHO05D000589 1.5e-12 77.8 107 32.7
Ca_12999_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 2.0e-12 77.4 186 25.3
Sopen01g017890 Solanum pennellii HOM05D000047 ORTHO05D000589 2.0e-12 77.4 213 23.0
Sopen09g012950 Solanum pennellii HOM05D000047 ORTHO05D000589 2.0e-12 77.4 292 22.6
Sopen06g014850 Solanum pennellii HOM05D000047 ORTHO05D000589 2.6e-12 77.0 158 25.9
Sopen12g021880 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-12 77.0 317 21.5
Sopen07g013040 Solanum pennellii HOM05D000047 ORTHO05D000589 3.3e-12 76.6 275 22.5
Sopen07g013240 Solanum pennellii HOM05D000047 ORTHO05D000589 3.3e-12 76.6 107 31.8
Sopen08g016290 Solanum pennellii HOM05D000047 ORTHO05D000589 3.3e-12 76.6 163 24.5
Sopen12g018420 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-12 76.6 157 25.5
CSS0027761 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 4.4e-12 76.3 50 64.0
CAN.G1473.18 Capsicum annuum HOM05D000047 ORTHO05D000589 5.7e-12 75.9 162 24.7
Ca_05624_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 5.7e-12 75.9 338 21.6
Sopen11g020130 Solanum pennellii HOM05D000047 ORTHO05D000044 7.4e-12 75.5 163 25.8
Sopen00g007350 Solanum pennellii HOM05D000047 ORTHO05D000589 9.7e-12 75.1 163 24.5
Sopen11g023980 Solanum pennellii HOM05D000047 ORTHO05D000589 9.7e-12 75.1 198 24.2
Sopen03g019340 Solanum pennellii HOM05D000047 ORTHO05D000589 1.3e-11 74.7 163 25.8
Sopen06g006650 Solanum pennellii HOM05D000047 ORTHO05D000589 1.3e-11 74.7 163 25.8
Sopen10g015870 Solanum pennellii HOM05D000047 ORTHO05D000589 1.3e-11 74.7 163 25.8
Sopen11g017540 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-11 74.7 302 22.8
CSS0014257 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 1.7e-11 74.3 52 59.6
Duzib041G0566 Durio zibethinus HOM05D000047 ORTHO05D000044 1.7e-11 74.3 331 22.4
Sopen06g005050 Solanum pennellii HOM05D000047 ORTHO05D000589 1.7e-11 74.3 107 31.8
Sopen03g011510 Solanum pennellii HOM05D000047 ORTHO05D000589 2.2e-11 73.9 103 32.0
Sopen10g006530 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-11 73.9 261 23.8
Sopen12g025230 Solanum pennellii HOM05D000047 ORTHO05D000044 2.2e-11 73.9 163 25.2
Thecc.05G094500 Theobroma cacao HOM05D000047 ORTHO05D000589 2.2e-11 73.9 162 25.3
Sopen01g012890 Solanum pennellii HOM05D000047 ORTHO05D000044 3.7e-11 73.2 302 22.2
CSS0033289 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 4.8e-11 72.8 52 59.6
Sopen02g007630 Solanum pennellii HOM05D000047 ORTHO05D000044 4.8e-11 72.8 159 25.8
Sopen10g023000 Solanum pennellii HOM05D000047 ORTHO05D000044 6.3e-11 72.4 162 28.4
Sopen11g009670 Solanum pennellii HOM05D000047 ORTHO05D000589 8.2e-11 72.0 163 24.5
TPR.G18553 Trifolium pratense HOM05D000047 ORTHO05D000589 1.4e-10 71.2 162 25.3
Sopen03g011900 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-10 70.9 195 21.0
TPR.G31129 Trifolium pratense HOM05D000047 ORTHO05D000589 1.8e-10 70.9 192 23.4
vmacro07682 Vaccinium macrocarpon HOM05D000026 ORTHO05D000127 1.8e-10 70.9 162 32.7
Ca_20345_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 4.1e-10 69.7 164 25.0
Thecc.02G169500 Theobroma cacao HOM05D000047 ORTHO05D000589 4.1e-10 69.7 162 22.8
VMungo0331G0129 Vigna mungo HOM05D000047 ORTHO05D000589 4.1e-10 69.7 287 19.2
Actinidia20119 Actinidia chinensis HOM05D010691 ORTHO05D008628 5.3e-10 69.3 58 51.7
CSS0043930 Camellia sinensis var. sinensis HOM05D015870 ORTHO05D008628 5.3e-10 69.3 70 51.4
Ca_06778_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 5.3e-10 69.3 240 24.2
TPR.G22150 Trifolium pratense HOM05D000047 ORTHO05D000589 5.3e-10 69.3 262 22.5
Sopen12g028430 Solanum pennellii HOM05D000047 ORTHO05D000589 1.2e-09 68.2 106 30.2
TPR.G5842 Trifolium pratense HOM05D000047 ORTHO05D000589 1.2e-09 68.2 162 23.5
PGR031G2181 Punica granatum HOM05D000047 ORTHO05D000589 2.0e-09 67.4 122 26.2
Sopen06g006470 Solanum pennellii HOM05D000047 ORTHO05D000044 2.0e-09 67.4 279 21.1
TPR.G13572 Trifolium pratense HOM05D000047 ORTHO05D000589 2.0e-09 67.4 202 22.8
Sopen02g008050 Solanum pennellii HOM05D000047 ORTHO05D000589 4.5e-09 66.2 304 22.4
Sopen11g019400 Solanum pennellii HOM05D000047 ORTHO05D000589 7.7e-09 65.5 118 28.0
MBI11_g38181_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 1.0e-08 65.1 65 49.2
TPR.G31393 Trifolium pratense HOM05D000047 ORTHO05D000589 1.0e-08 65.1 229 21.8
TPR.G35157 Trifolium pratense HOM05D002881 ORTHO05D000589 1.0e-08 65.1 327 20.8
Sopen03g009310 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-08 64.7 293 20.5
AUR62029076 Chenopodium quinoa HOM05D009273 ORTHO05D011122 2.2e-08 63.9 327 22.0
AUR62042427 Chenopodium quinoa HOM05D009273 ORTHO05D011122 2.2e-08 63.9 322 23.3
ECA238G4817 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.2e-08 63.9 288 24.7
MBI12_g01746_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D004676 2.2e-08 63.9 129 24.0
Potri.008G142920 Populus trichocarpa HOM05D000047 ORTHO05D000589 2.2e-08 63.9 299 20.7
MBI18_g05692_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D004676 3.8e-08 63.2 105 27.6
Sopen11g022480 Solanum pennellii HOM05D000047 ORTHO05D000589 3.8e-08 63.2 290 22.8
Sopen02g007580 Solanum pennellii HOM05D000047 ORTHO05D000589 5.0e-08 62.8 124 25.8
CSS0048885 Camellia sinensis var. sinensis HOM05D001469 ORTHO05D001648 6.5e-08 62.4 56 60.7
MBI12_g45871_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D004676 6.5e-08 62.4 151 27.8
MBI16_g17767_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 8.5e-08 62.0 63 47.6
MBI18_g24630_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 8.5e-08 62.0 65 44.6
Sopen03g018460 Solanum pennellii HOM05D000047 ORTHO05D000589 8.5e-08 62.0 108 27.8
Sopen05g027230 Solanum pennellii HOM05D000002 ORTHO05D000001 8.5e-08 62.0 124 25.8
CAN.G1949.1 Capsicum annuum HOM05D000047 ORTHO05D000589 1.9e-07 60.8 78 30.8
Sopen07g006600 Solanum pennellii HOM05D000047 ORTHO05D000589 1.9e-07 60.8 119 25.2
MBI05_g23627_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 2.5e-07 60.5 65 44.6
Sopen01g016100 Solanum pennellii HOM05D000047 ORTHO05D000589 2.5e-07 60.5 108 28.7
Sopen04g011230 Solanum pennellii HOM05D000014 ORTHO05D000589 2.5e-07 60.5 120 23.3
Manes.14G150022 Manihot esculenta HOM05D000429 ORTHO05D000880 3.2e-07 60.1 291 22.0
Sopen09g026250 Solanum pennellii HOM05D000047 ORTHO05D000589 3.2e-07 60.1 242 22.7
Sopen10g012320 Solanum pennellii HOM05D000047 ORTHO05D000589 3.2e-07 60.1 163 25.2
Manes.18G025086 Manihot esculenta HOM05D000429 ORTHO05D000880 5.5e-07 59.3 294 22.8
Dinv06737 Davidia involucrata HOM05D018768 ORTHO05D026392 7.2e-07 58.9 147 33.3
Dinv23015 Davidia involucrata HOM05D012821 ORTHO05D008628 7.2e-07 58.9 288 23.3
Sopen05g016500 Solanum pennellii HOM05D000047 ORTHO05D000589 7.2e-07 58.9 296 22.6
MBI13_g19838_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 9.4e-07 58.5 77 35.1
MBI09_g04383_MAGBIO Magnolia biondii HOM05D007969 ORTHO05D008628 1.2e-06 58.2 65 44.6
MBI17_g23155_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D004604 1.6e-06 57.8 65 43.1
Sopen01g010900 Solanum pennellii HOM05D000047 ORTHO05D000589 1.6e-06 57.8 110 26.4
Sopen11g023960 Solanum pennellii HOM05D000047 ORTHO05D000589 1.6e-06 57.8 120 24.2
PSO478G3003 Papaver somniferum HOM05D009560 ORTHO05D001383 2.1e-06 57.4 248 21.8
PSO832G0303 Papaver somniferum HOM05D000429 ORTHO05D000352 2.7e-06 57.0 276 21.4
Sopen12g014880 Solanum pennellii HOM05D000047 ORTHO05D000589 2.7e-06 57.0 131 23.7
Manes.18G056202 Manihot esculenta HOM05D000429 ORTHO05D000880 3.6e-06 56.6 306 22.9
Oeu014370.1 Olea europaea HOM05D000429 ORTHO05D000352 3.6e-06 56.6 289 23.5
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 3.6e-06 56.6 291 21.3
CSS0019235 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 4.7e-06 56.2 37 62.2
CSS0045163 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 4.7e-06 56.2 37 62.2
Sopen06g006620 Solanum pennellii HOM05D000002 ORTHO05D000001 4.7e-06 56.2 157 23.6
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 4.7e-06 56.2 77 29.9
TPR.G40512 Trifolium pratense HOM05D000047 ORTHO05D000589 4.7e-06 56.2 104 27.9
Lj5g0013972 Lotus japonicus HOM05D000429 ORTHO05D002578 6.1e-06 55.8 292 21.6
MBI11_g15179_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 6.1e-06 55.8 50 48.0
Dinv40638 Davidia involucrata HOM05D008893 ORTHO05D001383 8.0e-06 55.5 143 26.6


User provided reference genes

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