Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014415 Camellia sinensis var. sinensis HOM05D031265 ORTHO05D043330 2.8e-47 192.6 190 100.0
CSS0048632 Camellia sinensis var. sinensis HOM05D000132 ORTHO05D000058 1.4e-09 67.4 50 68.0
Cc00_g32720 Coffea canephora HOM05D000132 ORTHO05D000058 2.3e-09 66.6 43 65.1
Cc01_g03470 Coffea canephora HOM05D031265 ORTHO05D043330 3.9e-09 65.9 45 62.2
FAN25G3225 Fragaria x ananassa HOM05D000132 ORTHO05D000058 3.9e-09 65.9 45 64.4
QL09p022761 Quercus lobata HOM05D000132 ORTHO05D000058 6.7e-09 65.1 54 50.0
FvH4_4g04540 Fragaria vesca HOM05D000132 ORTHO05D000058 8.8e-09 64.7 45 60.0
CSS0029910 Camellia sinensis var. sinensis HOM05D031265 ORTHO05D109996 1.5e-08 63.9 34 94.1
FAN16G3584 Fragaria x ananassa HOM05D000132 ORTHO05D000058 1.5e-08 63.9 43 65.1
Eucgr.F02419 Eucalyptus grandis HOM05D000132 ORTHO05D000058 3.3e-08 62.8 54 53.7
Eucgr.G02274 Eucalyptus grandis HOM05D000132 ORTHO05D000058 5.7e-08 62.0 48 56.2
FAN04G0293 Fragaria x ananassa HOM05D000132 ORTHO05D000058 5.7e-08 62.0 43 60.5
MD09G1153100 Malus domestica HOM05D000132 ORTHO05D000058 9.7e-08 61.2 42 66.7
CSS0049026 Camellia sinensis var. sinensis HOM05D031265 ORTHO05D110935 1.1e-06 57.8 34 85.3
Eucgr.F02421 Eucalyptus grandis HOM05D000132 ORTHO05D000058 1.1e-06 57.8 54 51.9
Os02g0553000 Oryza sativa ssp. japonica HOM05D000132 ORTHO05D000058 1.8e-06 57.0 41 58.5
Eucgr.K02366 Eucalyptus grandis HOM05D000132 ORTHO05D000058 4.1e-06 55.8 42 59.5
RcHm_v2.0_Chr4g0409921 Rosa chinensis HOM05D000132 ORTHO05D000058 4.1e-06 55.8 46 56.5
Potri.013G037632 Populus trichocarpa HOM05D000132 ORTHO05D000058 5.3e-06 55.5 42 50.0


User provided reference genes

Program Settings