Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014410 Camellia sinensis var. sinensis HOM05D002321 ORTHO05D111970 1.4e-86 322.8 152 100.0
CSS0022296 Camellia sinensis var. sinensis HOM05D002321 ORTHO05D006445 4.4e-11 72.0 91 51.6
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 2.9e-10 69.3 95 47.4
vmacro19825 Vaccinium macrocarpon HOM05D002321 ORTHO05D006445 2.4e-09 66.2 91 46.2
CSS0017136 Camellia sinensis var. sinensis HOM05D002321 ORTHO05D006445 7.0e-09 64.7 91 45.1
Oeu016640.1 Olea europaea HOM05D002321 ORTHO05D006445 7.0e-09 64.7 101 44.6
Rhsim05G0115000 Rhododendron simsii HOM05D002321 ORTHO05D006445 7.0e-09 64.7 65 55.4
Actinidia26198 Actinidia chinensis HOM05D002321 ORTHO05D006445 9.2e-09 64.3 107 41.1
Lj9A259T47 Lonicera japonica HOM05D002321 ORTHO05D006445 9.2e-09 64.3 130 35.4
Dinv29681 Davidia involucrata HOM05D002321 ORTHO05D006445 2.0e-08 63.2 107 39.3
Cc02_g23720 Coffea canephora HOM05D002321 ORTHO05D006445 7.8e-08 61.2 110 38.2
Manes.07G030900 Manihot esculenta HOM05D002321 ORTHO05D006445 3.0e-07 59.3 107 37.4
Dinv29637 Davidia involucrata HOM05D002321 ORTHO05D006445 3.9e-07 58.9 91 39.6
Peaxi162Scf00071g00002 Petunia axillaris HOM05D002321 ORTHO05D006445 3.9e-07 58.9 93 40.9
Duzib160G0234 Durio zibethinus HOM05D002321 ORTHO05D006445 5.0e-07 58.5 91 41.8
Peaxi162Scf00000g00067 Petunia axillaris HOM05D002321 ORTHO05D006445 5.0e-07 58.5 120 34.2
Glyma.07G272200 Glycine max HOM05D002321 ORTHO05D006445 6.6e-07 58.2 107 37.4
Gohir.A03G081200 Gossypium hirsutum HOM05D002321 ORTHO05D006445 6.6e-07 58.2 78 46.2
Phvul.003G091200 Phaseolus vulgaris HOM05D002321 ORTHO05D006445 6.6e-07 58.2 107 37.4
Aa31sc221G80 Aethionema arabicum HOM05D002321 ORTHO05D006445 8.6e-07 57.8 105 37.1
Glyma.17G002100 Glycine max HOM05D002321 ORTHO05D006445 8.6e-07 57.8 107 38.3
Gohir.D02G105400 Gossypium hirsutum HOM05D002321 ORTHO05D006445 8.6e-07 57.8 78 44.9
Gorai.005G119600 Gossypium raimondii HOM05D002321 ORTHO05D006445 8.6e-07 57.8 78 44.9
Duzib192G0835 Durio zibethinus HOM05D002321 ORTHO05D006445 1.1e-06 57.4 107 34.6
Nitab4.5_0010848g0010 Nicotiana tabacum HOM05D002321 ORTHO05D006445 1.1e-06 57.4 108 36.1
VMungo1215G1402 Vigna mungo HOM05D002321 ORTHO05D006445 1.1e-06 57.4 107 36.4
Hma1.2p1_0157F.1_g069140 Hydrangea macrophylla HOM05D002321 ORTHO05D006445 1.5e-06 57.0 107 35.5
Lj4g0019033 Lotus japonicus HOM05D002321 ORTHO05D006445 1.5e-06 57.0 107 37.4
PGR042G0050 Punica granatum HOM05D002321 ORTHO05D006445 1.5e-06 57.0 107 36.4
Haze_09974 Corylus avellana HOM05D002321 ORTHO05D006445 1.9e-06 56.6 65 49.2
Eucgr.G00067 Eucalyptus grandis HOM05D002321 ORTHO05D006445 2.5e-06 56.2 65 47.7
HanXRQChr09g0248771 Helianthus annuus HOM05D002321 ORTHO05D006445 2.5e-06 56.2 107 35.5
Lj5A285T49 Lonicera japonica HOM05D002321 ORTHO05D006445 2.5e-06 56.2 89 40.4
THA.LOC104809044 Tarenaya hassleriana HOM05D002321 ORTHO05D006445 2.5e-06 56.2 65 46.2
Thecc.06G020000 Theobroma cacao HOM05D002321 ORTHO05D006445 2.5e-06 56.2 65 47.7
Cfa004434 Carpinus fangiana HOM05D002321 ORTHO05D006445 3.3e-06 55.8 65 47.7
ECA238G2920 Erigeron canadensis HOM05D002321 ORTHO05D006445 3.3e-06 55.8 65 46.2
Sed0026062 Sechium edule HOM05D002321 ORTHO05D006445 4.3e-06 55.5 101 38.6
Lsat_1_v5_gn_9_124960 Lactuca sativa HOM05D002321 ORTHO05D006445 5.6e-06 55.1 65 46.2
Nn5g27149 Nelumbo nucifera HOM05D002321 ORTHO05D006445 5.6e-06 55.1 65 44.6
PGSC0003DMG400021663 Solanum tuberosum HOM05D002321 ORTHO05D006445 5.6e-06 55.1 108 34.3


User provided reference genes

Program Settings