Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 9.4e-130 466.8 233 100.0
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 7.6e-63 244.6 239 58.2
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 8.1e-57 224.6 242 51.7
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 4.3e-50 202.2 245 50.2
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.1e-48 197.6 243 49.0
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.1e-48 197.6 243 49.0
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 1.4e-45 187.2 231 48.9
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 3.2e-45 186.0 226 49.1
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 4.2e-45 185.7 226 49.6
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 9.3e-45 184.5 224 48.2
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.2e-44 184.1 226 49.1
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 6.0e-44 181.8 225 47.1
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 3.0e-43 179.5 225 48.0
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 6.7e-43 178.3 259 43.6
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 1.1e-42 177.6 259 42.1
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 4.3e-42 175.6 223 46.6
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 9.7e-42 174.5 225 45.8
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 1.4e-40 170.6 166 59.0
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 1.4e-40 170.6 261 44.4
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 9.0e-40 167.9 228 47.4
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 1.2e-39 167.5 223 44.4
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 1.5e-39 167.2 225 45.3
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 7.6e-39 164.9 225 44.4
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 7.6e-39 164.9 225 47.1
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 7.6e-39 164.9 225 47.1
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 1.3e-38 164.1 225 46.7
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 2.2e-38 163.3 225 44.4
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 3.8e-38 162.5 231 45.9
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 5.0e-38 162.2 225 47.1
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 8.5e-38 161.4 225 46.7
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 1.4e-37 160.6 226 43.8
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 1.9e-37 160.2 226 46.0
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 4.2e-37 159.1 228 43.9
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 9.3e-37 157.9 258 41.5
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 1.2e-36 157.5 226 45.6
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.6e-36 157.1 225 45.8
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 2.1e-36 156.8 226 43.8
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 2.7e-36 156.4 228 46.1
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.3e-35 154.1 273 38.8
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 3.9e-35 152.5 256 39.5
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 5.1e-35 152.1 228 43.4
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 2.5e-34 149.8 260 40.8
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 2.5e-34 149.8 274 38.0
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 5.7e-34 148.7 226 41.2
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 2.2e-33 146.7 225 42.7
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 3.7e-33 146.0 267 37.8
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 3.7e-33 146.0 226 42.5
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 6.3e-33 145.2 227 42.3
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 6.3e-33 145.2 234 42.7
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 3.1e-32 142.9 227 43.2
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 4.1e-32 142.5 228 41.7
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 5.3e-32 142.1 227 41.4
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 6.9e-32 141.7 227 42.7
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 2.0e-31 140.2 240 40.8
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 4.5e-31 139.0 220 40.0
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 7.7e-31 138.3 226 41.2
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 7.7e-31 138.3 228 42.1
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 1.7e-30 137.1 226 40.3
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 3.8e-30 136.0 224 41.1
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 3.2e-29 132.9 159 50.3
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 4.2e-29 132.5 252 36.5
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 9.4e-29 131.3 211 42.7
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 1.2e-28 131.0 228 42.5
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 1.6e-28 130.6 255 38.4
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 2.7e-28 129.8 221 38.5
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.8e-27 127.1 223 38.6
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 3.9e-27 125.9 281 35.6
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 2.6e-26 123.2 244 39.8
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 1.1e-24 117.9 137 48.9
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 1.4e-24 117.5 262 35.1
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 5.3e-24 115.5 116 55.2
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.3e-22 110.9 260 34.2
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 1.3e-22 110.9 282 33.0
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 4.7e-20 102.4 231 36.8
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 1.4e-19 100.9 234 34.6
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 1.8e-19 100.5 142 44.4
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 3.9e-19 99.4 248 34.3
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 8.8e-19 98.2 248 34.3
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 1.5e-18 97.4 59 71.2
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 2.6e-18 96.7 257 33.5
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 3.3e-18 96.3 257 33.1
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 3.3e-18 96.3 257 33.1
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 7.4e-18 95.1 160 40.0
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 1.7e-17 94.0 142 40.1
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 1.7e-17 94.0 59 71.2
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 2.8e-17 93.2 142 40.1
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 3.7e-17 92.8 142 40.8
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 4.8e-17 92.4 282 29.4
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 8.2e-17 91.7 227 32.6
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 8.2e-17 91.7 142 38.7
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 1.1e-16 91.3 143 41.3
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 7.0e-16 88.6 59 62.7
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 1.2e-15 87.8 212 32.1
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 2.0e-15 87.0 61 63.9
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 2.6e-15 86.7 59 62.7
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 1.0e-11 74.7 60 53.3
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 3.0e-11 73.2 61 55.7
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 1.5e-10 70.9 234 29.1
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 1.3e-09 67.8 166 31.9
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 3.5e-07 59.7 36 77.8
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 4.5e-07 59.3 186 28.0


User provided reference genes

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