Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 1.9e-60 235.7 124 100.0
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 7.6e-54 213.8 124 88.7
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 2.5e-52 208.8 124 83.1
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 7.2e-52 207.2 124 85.5
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 1.6e-51 206.1 124 85.5
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 3.5e-51 204.9 124 84.7
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 7.9e-51 203.8 124 83.9
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 3.0e-50 201.8 123 83.7
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 5.1e-50 201.1 123 82.1
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 1.5e-49 199.5 124 79.0
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 2.5e-49 198.7 124 83.9
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 2.5e-49 198.7 124 79.0
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 2.5e-49 198.7 124 78.2
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 3.3e-49 198.4 120 85.0
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 3.3e-49 198.4 124 79.8
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 9.7e-49 196.8 124 81.5
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 1.3e-48 196.4 124 79.0
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 1.6e-48 196.1 124 81.5
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 1.6e-48 196.1 124 79.0
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 1.6e-48 196.1 124 81.5
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 2.2e-48 195.7 124 80.6
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 4.8e-48 194.5 124 82.3
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 8.2e-48 193.7 123 80.5
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 1.1e-47 193.4 120 80.8
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 1.8e-47 192.6 124 78.2
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 4.1e-47 191.4 126 78.6
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 4.1e-47 191.4 126 78.6
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 4.1e-47 191.4 124 77.4
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 9.0e-47 190.3 124 79.8
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 2.0e-46 189.1 124 79.8
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 2.6e-46 188.7 122 78.7
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 3.4e-46 188.3 122 79.5
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 4.5e-46 188.0 122 77.9
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 5.9e-46 187.6 126 77.0
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 5.9e-46 187.6 124 75.8
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 5.0e-45 184.5 155 65.2
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 6.5e-45 184.1 120 79.2
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 8.5e-45 183.7 120 79.2
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 8.5e-45 183.7 120 78.3
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 1.4e-44 183.0 118 80.5
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 1.9e-44 182.6 124 75.8
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 5.5e-44 181.0 122 75.4
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 5.5e-44 181.0 122 75.4
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 7.2e-44 180.6 120 77.5
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 9.4e-44 180.3 122 74.6
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 1.6e-43 179.5 118 80.5
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 1.6e-43 179.5 124 73.4
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 2.1e-43 179.1 119 73.9
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 2.1e-43 179.1 119 73.9
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 2.1e-43 179.1 120 74.2
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 4.6e-43 177.9 122 73.8
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 4.6e-43 177.9 118 79.7
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 4.6e-43 177.9 119 72.3
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 7.9e-43 177.2 119 71.4
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 7.9e-43 177.2 124 71.0
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 7.9e-43 177.2 122 72.1
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 1.0e-42 176.8 119 73.1
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 1.4e-42 176.4 119 71.4
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.8e-42 176.0 119 72.3
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 5.1e-42 174.5 119 70.6
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 5.1e-42 174.5 119 70.6
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 5.1e-42 174.5 119 70.6
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 8.8e-42 173.7 124 69.4
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 8.8e-42 173.7 140 65.7
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 1.1e-41 173.3 122 72.1
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 1.5e-41 172.9 119 69.7
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 2.0e-41 172.6 118 71.2
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 2.0e-41 172.6 121 72.7
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 2.0e-41 172.6 122 68.0
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 3.3e-41 171.8 120 70.0
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 4.3e-41 171.4 122 69.7
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 7.4e-41 170.6 119 68.9
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 9.7e-41 170.2 121 71.1
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 1.7e-40 169.5 122 69.7
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 2.2e-40 169.1 121 69.4
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 2.8e-40 168.7 122 68.9
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 2.8e-40 168.7 122 68.9
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 2.8e-40 168.7 125 68.8
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 5.3e-39 164.5 123 67.5
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 6.9e-39 164.1 122 65.6
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 1.2e-38 163.3 122 64.8
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 2.0e-38 162.5 124 63.7
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 3.4e-38 161.8 117 68.4
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 1.7e-37 159.5 120 67.5
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 2.9e-37 158.7 122 68.9
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 3.2e-36 155.2 90 88.9
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 2.1e-35 152.5 89 88.8
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 7.9e-35 150.6 101 72.3
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 3.0e-34 148.7 113 65.5
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 6.7e-34 147.5 108 66.7
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 4.4e-33 144.8 93 81.7
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 5.7e-33 144.4 117 59.0
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 7.4e-33 144.1 122 59.0
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 1.7e-32 142.9 174 46.6
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 3.7e-32 141.7 90 78.9
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 6.3e-32 141.0 113 60.2
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.8e-31 139.4 88 83.0
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 4.1e-31 138.3 88 83.0
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 5.9e-30 134.4 87 72.4
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 5.9e-30 134.4 88 78.4
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 1.0e-29 133.7 100 66.0
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 9.4e-28 127.1 89 68.5
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 1.2e-27 126.7 96 69.8
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 3.0e-26 122.1 97 67.0
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 5.2e-26 121.3 125 53.6
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 7.5e-25 117.5 121 50.4
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 2.8e-24 115.5 121 49.6
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 1.8e-23 112.8 102 54.9
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 3.5e-22 108.6 124 45.2
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.3e-21 106.7 121 48.8
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 7.2e-20 100.9 85 55.3
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 8.8e-18 94.0 54 79.6
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 2.1e-11 72.8 124 41.1


User provided reference genes

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