Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 2.7e-176 622.1 361 100.0
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 1.5e-134 483.4 360 76.7
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 9.1e-132 474.2 316 77.5
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 1.2e-128 463.8 318 74.5
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 1.2e-123 447.2 318 73.0
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 2.0e-123 446.4 318 73.0
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 2.7e-123 446.0 319 72.7
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 4.5e-123 445.3 318 72.6
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 1.7e-122 443.4 318 71.4
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 1.5e-121 440.3 318 71.1
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 1.5e-121 440.3 315 69.8
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 1.9e-121 439.9 315 69.8
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 1.9e-121 439.9 318 71.1
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 2.5e-121 439.5 316 69.6
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 3.3e-121 439.1 319 70.5
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 7.3e-121 438.0 316 70.6
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 2.8e-120 436.0 316 69.6
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 6.1e-120 434.9 317 69.1
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 6.1e-120 434.9 317 69.4
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 6.1e-120 434.9 315 68.9
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 8.0e-120 434.5 316 70.3
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 1.0e-119 434.1 330 66.7
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 1.0e-119 434.1 316 72.5
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 3.0e-119 432.6 314 72.3
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 4.0e-119 432.2 315 68.6
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.5e-118 430.3 315 67.0
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 2.6e-118 429.5 316 70.3
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 7.5e-118 427.9 317 66.6
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 9.8e-118 427.6 314 68.8
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 1.7e-117 426.8 316 66.8
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 2.2e-117 426.4 315 69.2
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 2.9e-117 426.0 313 67.7
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 2.9e-117 426.0 318 70.1
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 3.7e-117 425.6 317 67.5
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 3.7e-117 425.6 315 66.3
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 4.9e-117 425.2 317 66.6
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 8.3e-117 424.5 315 67.9
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 8.3e-117 424.5 316 67.7
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 1.8e-116 423.3 315 69.8
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 1.8e-116 423.3 314 70.4
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 4.1e-116 422.2 315 67.3
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 4.1e-116 422.2 315 67.3
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 4.1e-116 422.2 315 67.3
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 4.1e-116 422.2 314 69.4
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 5.4e-116 421.8 319 68.0
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 1.2e-115 420.6 322 66.5
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 1.2e-115 420.6 316 69.0
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 1.2e-115 420.6 313 71.9
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 1.6e-115 420.2 317 65.6
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 1.6e-115 420.2 316 66.8
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 1.6e-115 420.2 314 68.5
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 2.0e-115 419.9 314 70.4
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 2.7e-115 419.5 316 67.4
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 3.5e-115 419.1 313 70.0
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 4.6e-115 418.7 315 68.9
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 4.6e-115 418.7 314 67.5
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 4.6e-115 418.7 316 66.5
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 7.8e-115 417.9 315 65.7
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 7.8e-115 417.9 317 66.6
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 1.3e-114 417.2 317 66.2
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 1.3e-114 417.2 317 66.2
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 1.3e-114 417.2 313 71.6
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 1.3e-114 417.2 292 73.3
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 1.7e-114 416.8 315 65.1
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 1.7e-114 416.8 317 66.2
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 2.3e-114 416.4 320 69.4
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 3.0e-114 416.0 314 66.2
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 3.9e-114 415.6 317 67.2
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 1.5e-113 413.7 315 67.0
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 1.5e-113 413.7 317 65.9
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 1.5e-113 413.7 317 65.9
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 3.3e-113 412.5 316 68.7
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 4.3e-113 412.1 315 65.4
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 7.3e-113 411.4 316 69.0
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 1.2e-112 410.6 317 68.8
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 1.2e-112 410.6 317 68.8
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 1.6e-112 410.2 315 69.8
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 1.6e-112 410.2 315 69.8
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.8e-111 406.8 316 66.1
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 2.3e-111 406.4 317 67.8
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 4.0e-111 405.6 316 67.4
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 2.0e-110 403.3 315 67.9
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 2.0e-110 403.3 315 64.8
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 4.4e-110 402.1 316 65.2
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 7.5e-110 401.4 307 65.8
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 1.3e-109 400.6 312 66.3
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 5.4e-108 395.2 324 72.5
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 1.6e-107 393.7 316 63.9
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 1.7e-106 390.2 319 63.9
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 1.1e-103 380.9 320 61.9
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 5.2e-103 378.6 319 61.8
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.5e-102 377.1 316 60.4
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 1.5e-102 377.1 316 60.4
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 4.4e-102 375.6 315 60.0
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 4.4e-102 375.6 313 59.4
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 1.3e-101 374.0 294 65.6
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 1.7e-101 373.6 316 59.2
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 2.2e-101 373.2 316 59.8
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 5.4e-100 368.6 316 59.8
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 3.0e-98 362.8 314 63.7
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.9e-97 360.1 309 59.2
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 3.6e-96 355.9 316 58.9
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 8.1e-96 354.8 305 59.3
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 8.1e-96 354.8 316 58.2
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 1.4e-95 354.0 316 58.5
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 1.8e-95 353.6 305 60.7
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 3.1e-95 352.8 305 60.0
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 1.2e-94 350.9 305 59.7
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 2.0e-94 350.1 315 58.4
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 3.4e-94 349.4 317 57.7
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 3.4e-94 349.4 257 70.4
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 9.9e-94 347.8 316 55.4
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.7e-93 347.1 314 55.1
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 2.2e-93 346.7 313 58.5
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 3.8e-93 345.9 317 56.8
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 1.9e-92 343.6 314 54.8
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 1.2e-91 340.9 314 54.5
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 1.6e-91 340.5 313 57.5
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 1.3e-90 337.4 316 57.3
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 1.7e-90 337.0 317 53.9
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 3.0e-90 336.3 308 59.1
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 1.9e-89 333.6 316 57.9
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 2.1e-88 330.1 317 55.2
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 8.1e-88 328.2 253 66.0
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 1.1e-87 327.8 314 52.5
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 3.1e-87 326.2 316 55.4
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 1.3e-85 320.9 315 52.4
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 1.1e-84 317.8 316 53.8
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 7.1e-84 315.1 313 52.7
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 1.6e-83 313.9 270 61.5
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 2.1e-83 313.5 379 50.7
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 7.8e-83 311.6 316 52.2
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 1.0e-82 311.2 315 51.7
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 1.7e-82 310.5 251 64.9
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 3.9e-82 309.3 315 51.4
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 6.6e-82 308.5 314 51.6
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 4.3e-81 305.8 316 52.2
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 5.6e-81 305.4 235 67.7
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 5.6e-81 305.4 315 49.8
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 1.3e-80 304.3 314 51.3
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 3.6e-80 302.8 317 50.8
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 3.6e-80 302.8 317 50.8
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 1.8e-79 300.4 314 47.8
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 4.5e-78 295.8 249 60.6
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 2.4e-76 290.0 313 48.2
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 5.1e-74 282.3 189 74.1
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 3.3e-73 279.6 189 72.5
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.6e-72 277.3 189 70.4
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 7.6e-70 268.5 178 71.9
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 3.8e-69 266.2 239 58.6
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.6e-67 260.8 190 68.4
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 6.7e-66 255.4 312 46.8
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 7.4e-65 251.9 189 65.1
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 1.5e-62 244.2 235 54.0
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 2.5e-60 236.9 182 67.0
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 1.0e-58 231.5 190 60.5
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 5.1e-58 229.2 184 62.5
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 1.8e-55 220.7 227 57.3
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 3.8e-53 213.0 202 58.9
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 2.1e-51 207.2 303 41.6
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 4.6e-51 206.1 311 40.2
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 2.3e-42 177.2 153 64.1
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 1.3e-40 171.4 163 54.6
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 4.7e-35 152.9 172 48.8
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 1.5e-33 147.9 104 72.1
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 3.3e-33 146.7 137 56.2
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 3.5e-30 136.7 92 70.7
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 8.5e-29 132.1 89 69.7
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 2.5e-28 130.6 99 64.6
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 5.2e-26 122.9 75 80.0
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 1.5e-25 121.3 313 30.7
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 2.5e-20 104.0 76 61.8
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 8.0e-19 99.0 75 69.3
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 1.0e-18 98.6 81 59.3
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 5.2e-18 96.3 80 60.0
Lsat_1_v5_gn_7_47981 Lactuca sativa HOM05D003755 ORTHO05D004385 8.3e-16 89.0 66 63.6
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 5.4e-15 86.3 57 71.9
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 2.3e-13 80.9 74 62.2
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 5.0e-13 79.7 48 75.0
QL03p066087 Quercus lobata HOM05D003755 ORTHO05D004385 9.8e-09 65.5 54 66.7
AagrBONN_evm.TU.Sc2ySwM_228.3672 Anthoceros agrestis HOM05D003755 ORTHO05D004385 7.0e-07 59.3 75 44.0


User provided reference genes

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