Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014327 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 4.7e-193 677.6 315 100.0
CSS0008666 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 2.4e-192 675.2 315 99.7
CSS0008734 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 4.4e-191 671.0 315 98.7
CSS0006449 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 3.9e-171 604.7 315 88.9
CSS0006319 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 2.7e-156 555.4 315 85.1
Rhsim11G0103500 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.1e-59 234.6 385 36.9
Rhsim11G0104000 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.2e-58 231.1 385 35.8
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.2e-57 226.9 385 36.9
Rhsim11G0103900 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.6e-55 220.7 290 40.3
Lj5C320G6 Lonicera japonica HOM05D007560 ORTHO05D005947 2.4e-51 206.8 372 33.6
Actinidia16920 Actinidia chinensis HOM05D007560 ORTHO05D005947 3.1e-51 206.5 297 41.4
Rhsim11G0103700 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.8e-43 180.6 219 41.1
Lj5C321T2 Lonicera japonica HOM05D007560 ORTHO05D005947 4.5e-42 176.0 399 31.1
Lj5C336T5 Lonicera japonica HOM05D007560 ORTHO05D005947 1.1e-40 171.4 394 30.7
Lj6C390T13 Lonicera japonica HOM05D007560 ORTHO05D005947 4.2e-40 169.5 406 31.5
Lj8C356T1 Lonicera japonica HOM05D007560 ORTHO05D005947 1.1e-37 161.4 402 29.6
Lj5C338T12 Lonicera japonica HOM05D007560 ORTHO05D005947 3.1e-35 153.3 384 31.2
Lj5C336T6 Lonicera japonica HOM05D007560 ORTHO05D005947 4.1e-35 152.9 392 31.4
Rhsim11G0104200 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.5e-34 151.0 341 32.3
Lj5C336G7 Lonicera japonica HOM05D007560 ORTHO05D005947 1.2e-31 141.4 365 28.8
Peaxi162Scf00408g00045 Petunia axillaris HOM05D007560 ORTHO05D005947 2.0e-29 134.0 355 28.5
Eucgr.H04774 Eucalyptus grandis HOM05D007560 ORTHO05D005947 2.2e-28 130.6 208 32.7
Nitab4.5_0001737g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 3.7e-28 129.8 385 27.5
Lj5C338T11 Lonicera japonica HOM05D007560 ORTHO05D005947 4.8e-28 129.4 318 31.8
COL.COLO4_32922 Corchorus olitorius HOM05D007560 ORTHO05D005947 4.1e-27 126.3 385 26.5
Lj5C338T9 Lonicera japonica HOM05D007560 ORTHO05D005947 4.1e-27 126.3 333 30.6
Eucgr.H04775 Eucalyptus grandis HOM05D007560 ORTHO05D005947 7.7e-26 122.1 340 25.9
Rhsim11G0103400 Rhododendron simsii HOM05D007560 ORTHO05D005947 7.7e-26 122.1 363 27.8
Peaxi162Scf00058g00156 Petunia axillaris HOM05D007560 ORTHO05D005947 1.3e-25 121.3 367 25.6
Lj6C625T6 Lonicera japonica HOM05D007560 ORTHO05D005947 1.7e-25 120.9 218 34.9
Eucgr.H04773 Eucalyptus grandis HOM05D007560 ORTHO05D005947 3.8e-25 119.8 341 27.3
COL.COLO4_33377 Corchorus olitorius HOM05D007560 ORTHO05D005947 6.5e-25 119.0 384 23.7
Peaxi162Scf00153g00103 Petunia axillaris HOM05D007560 ORTHO05D005947 6.5e-25 119.0 217 33.2
Nitab4.5_0000005g0280 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.1e-24 118.2 209 33.5
Nitab4.5_0001058g0060 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.1e-24 118.2 217 32.7
Aqoxy6G01701 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.2e-24 116.7 218 34.4
Hund19676 Selenicereus undatus HOM05D007560 ORTHO05D005947 4.2e-24 116.3 397 24.7
Lj8C38T12 Lonicera japonica HOM05D007560 ORTHO05D005947 7.2e-24 115.5 377 27.9
CAN.G135.62 Capsicum annuum HOM05D007560 ORTHO05D005947 9.4e-24 115.2 221 33.5
Nitab4.5_0006682g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 9.4e-24 115.2 217 30.9
Peaxi162Scf00191g01113 Petunia axillaris HOM05D007560 ORTHO05D005947 9.4e-24 115.2 215 32.6
Lj8P356T21 Lonicera japonica HOM05D007560 ORTHO05D005947 1.2e-23 114.8 215 33.5
Cc02_g35550 Coffea canephora HOM05D007560 ORTHO05D005947 1.6e-23 114.4 213 33.3
Migut.K01081 Erythranthe guttata HOM05D007560 ORTHO05D005947 3.6e-23 113.2 218 31.2
Aqoxy5G01431 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 8.0e-23 112.1 206 33.5
Migut.B00757 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.8e-22 110.9 222 32.0
Migut.K01090 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.8e-22 110.9 222 34.7
Rhsim11G0104100 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.8e-22 110.9 165 38.2
Migut.B00756 Erythranthe guttata HOM05D007560 ORTHO05D005947 3.9e-22 109.8 230 30.4
Rhsim11G0091600 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.9e-22 109.8 156 36.5
Aqoxy5G04188 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 5.2e-22 109.4 341 29.0
Nitab4.5_0009688g0040 Nicotiana tabacum HOM05D007560 ORTHO05D005947 5.2e-22 109.4 293 29.0
Migut.B00678 Erythranthe guttata HOM05D007560 ORTHO05D005947 8.8e-22 108.6 222 31.1
Peaxi162Scf00598g00085 Petunia axillaris HOM05D007560 ORTHO05D005947 7.4e-21 105.5 216 31.9
Aqoxy5G04187 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.7e-20 103.2 209 34.0
Aqoxy7G01047 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.7e-20 103.2 208 33.7
Aqoxy2G03976 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 4.8e-20 102.8 353 26.1
Migut.K01083 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.8e-19 100.9 209 31.6
Peaxi162Scf00738g00116 Petunia axillaris HOM05D007560 ORTHO05D005947 9.1e-19 98.6 241 30.3
Aqoxy5G01432 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.6e-18 97.1 216 34.3
Lj8P356T28 Lonicera japonica HOM05D007560 ORTHO05D005947 3.5e-18 96.7 68 63.2
Actinidia01719 Actinidia chinensis HOM05D007560 ORTHO05D005947 5.0e-17 92.8 117 42.7
Aqoxy2G00132 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 6.5e-17 92.4 147 35.4
COL.COLO4_03806 Corchorus olitorius HOM05D023542 ORTHO05D005947 1.5e-16 91.3 176 31.2
COL.COLO4_03807 Corchorus olitorius HOM05D023542 ORTHO05D005947 1.9e-16 90.9 272 29.4
Lj6A626T22 Lonicera japonica HOM05D007560 ORTHO05D005947 2.5e-16 90.5 215 31.6
Aqoxy5G01975 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.2e-16 90.1 342 24.3
PGSC0003DMG400039452 Solanum tuberosum HOM05D007560 ORTHO05D005947 4.2e-16 89.7 153 34.0
Aqoxy7G01380 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 9.4e-16 88.6 217 30.0
CAN.G1248.7 Capsicum annuum HOM05D015457 ORTHO05D020327 9.4e-16 88.6 222 28.4
Peaxi162Scf00738g00123 Petunia axillaris HOM05D007560 ORTHO05D005947 9.4e-16 88.6 161 32.9
Aqoxy7G01375 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.7e-15 87.0 194 28.4
Aqoxy5G01909 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 6.1e-15 85.9 411 22.4
Lj6A404T21 Lonicera japonica HOM05D007560 ORTHO05D005947 6.1e-15 85.9 101 42.6
Lj5C336T3 Lonicera japonica HOM05D007560 ORTHO05D005947 8.0e-15 85.5 162 30.9
Lj6C626T9 Lonicera japonica HOM05D007560 ORTHO05D005947 1.4e-14 84.7 68 55.9
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.2e-14 82.8 213 26.8
PSO421G0214 Papaver somniferum HOM05D008691 ORTHO05D005947 2.6e-13 80.5 199 33.2
Lj5E336G0 Lonicera japonica HOM05D007560 ORTHO05D005947 3.3e-13 80.1 68 58.8
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.3e-13 80.1 213 26.3
SGA_v2.0_scaffold279G46801 Striga asiatica HOM05D031079 ORTHO05D005947 9.7e-13 78.6 193 30.1
Nitab4.5_0000800g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.3e-12 78.2 118 38.1
CAN.G135.61 Capsicum annuum HOM05D007560 ORTHO05D005947 1.7e-12 77.8 158 32.3
PSO478G1223 Papaver somniferum HOM05D008691 ORTHO05D005947 2.2e-12 77.4 206 34.0
Peaxi162Scf00738g00002 Petunia axillaris HOM05D007560 ORTHO05D005947 2.2e-12 77.4 202 29.2
Lj4A614G14 Lonicera japonica HOM05D007560 ORTHO05D005947 8.2e-12 75.5 83 49.4
Peaxi162Scf00738g00112 Petunia axillaris HOM05D007560 ORTHO05D005947 1.1e-11 75.1 154 27.9
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.1e-11 75.1 283 25.1
TAR371G0533 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.8e-11 74.3 315 23.2
Aqoxy5G01433 Aquilegia oxysepala HOM05D007560 ORTHO05D005947 2.4e-11 73.9 151 34.4
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 3.1e-11 73.6 126 32.5
SGA_v2.0_scaffold279G46810 Striga asiatica HOM05D031079 ORTHO05D005947 7.0e-11 72.4 195 29.2
PSO384G1299 Papaver somniferum HOM05D008691 ORTHO05D005947 9.1e-11 72.0 196 29.6
COL.COLO4_10475 Corchorus olitorius HOM05D023542 ORTHO05D005947 2.0e-10 70.9 219 26.5
Lj4C614T4 Lonicera japonica HOM05D007560 ORTHO05D005947 3.5e-10 70.1 79 40.5
PSO339G4880 Papaver somniferum HOM05D008691 ORTHO05D005947 3.5e-10 70.1 227 30.8
Migut.C00457 Erythranthe guttata HOM05D031079 ORTHO05D005947 7.7e-10 68.9 168 28.6
Actinidia01716 Actinidia chinensis HOM05D007560 ORTHO05D005947 3.8e-09 66.6 55 58.2
Sabra02G0170100 Salix brachista HOM05D000007 ORTHO05D000521 3.8e-09 66.6 242 24.8
Aqoxy7G01046 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 5.0e-09 66.2 95 33.7
TAR371G1173 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.0e-09 66.2 132 29.5
Solyc01g102320.2 Solanum lycopersicum HOM05D015457 ORTHO05D020327 6.5e-09 65.9 186 29.6
Dinv30955 Davidia involucrata HOM05D008691 ORTHO05D005947 1.1e-08 65.1 56 57.1
Actinidia26832 Actinidia chinensis HOM05D000007 ORTHO05D000017 1.5e-08 64.7 260 26.9
Lj5P358T14 Lonicera japonica HOM05D007560 ORTHO05D005947 1.9e-08 64.3 68 48.5
Lj5A667T12 Lonicera japonica HOM05D007560 ORTHO05D005947 5.5e-08 62.8 72 38.9
PSO782G1951 Papaver somniferum HOM05D008691 ORTHO05D005947 5.5e-08 62.8 216 26.9
RcHm_v2.0_Chr4g0420091 Rosa chinensis HOM05D000007 ORTHO05D000521 5.5e-08 62.8 294 25.9
Aqoxy5G01978 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 7.2e-08 62.4 125 31.2
Lju967A0T15 Lonicera japonica HOM05D007560 ORTHO05D005947 7.2e-08 62.4 131 30.5
Nitab4.5_0021475g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 7.2e-08 62.4 104 29.8
Thecc.01G188100 Theobroma cacao HOM05D000007 ORTHO05D000521 9.4e-08 62.0 220 23.2
HanXRQChr08g0209381 Helianthus annuus HOM05D000007 ORTHO05D000521 1.2e-07 61.6 93 32.3
TAR371G0023 Trochodendron aralioides HOM05D000007 ORTHO05D022563 1.6e-07 61.2 116 28.4
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.6e-07 61.2 211 28.0
PSO063G7584 Papaver somniferum HOM05D008691 ORTHO05D005947 2.7e-07 60.5 225 25.8
PSO210G3980 Papaver somniferum HOM05D000007 ORTHO05D000676 2.7e-07 60.5 59 50.8
PSO173G0057 Papaver somniferum HOM05D000007 ORTHO05D000676 4.7e-07 59.7 222 25.7
Lj6g0019357 Lotus japonicus HOM05D000007 ORTHO05D000017 6.1e-07 59.3 124 29.8
PSO170G2572 Papaver somniferum HOM05D008691 ORTHO05D005947 6.1e-07 59.3 227 25.6
Rhsim04G0041100 Rhododendron simsii HOM05D000007 ORTHO05D000521 6.1e-07 59.3 67 46.3
Oeu030025.1 Olea europaea HOM05D000007 ORTHO05D000521 8.0e-07 58.9 60 50.0
PSO541G3996 Papaver somniferum HOM05D000007 ORTHO05D000676 8.0e-07 58.9 53 49.1
PSO170G2084 Papaver somniferum HOM05D008691 ORTHO05D005947 1.0e-06 58.5 223 24.7
Potri.002G223000 Populus trichocarpa HOM05D000007 ORTHO05D000521 1.0e-06 58.5 238 23.1
HanXRQChr00c0237g0572781 Helianthus annuus HOM05D000007 ORTHO05D000521 1.4e-06 58.2 79 32.9
HanXRQChr11g0327481 Helianthus annuus HOM05D000007 ORTHO05D000676 1.4e-06 58.2 79 32.9
TAR371G1227 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.4e-06 58.2 130 27.7
HanXRQChr03g0074871 Helianthus annuus HOM05D000007 ORTHO05D000521 2.3e-06 57.4 111 30.6
Lsat_1_v5_gn_9_104220 Lactuca sativa HOM05D000007 ORTHO05D000521 2.3e-06 57.4 85 36.5
Nitab4.5_0000157g0070 Nicotiana tabacum HOM05D000007 ORTHO05D007252 2.3e-06 57.4 161 24.8
PSO339G6675 Papaver somniferum HOM05D000007 ORTHO05D000676 2.3e-06 57.4 271 23.2
SGA_v2.0_scaffold31G12737 Striga asiatica HOM05D000007 ORTHO05D007252 2.3e-06 57.4 165 26.1
HanXRQChr03g0074881 Helianthus annuus HOM05D000007 ORTHO05D000521 3.0e-06 57.0 79 31.6
Nitab4.5_0013904g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.0e-06 57.0 269 27.9
Rhsim03G0071600 Rhododendron simsii HOM05D019855 ORTHO05D018548 3.0e-06 57.0 206 26.7
RcHm_v2.0_Chr6g0291931 Rosa chinensis HOM05D001729 ORTHO05D001155 4.0e-06 56.6 42 59.5
Aqoxy6G02474 Aquilegia oxysepala HOM05D000007 ORTHO05D026711 5.2e-06 56.2 334 21.3
Glyma.06G126800 Glycine max HOM05D000007 ORTHO05D000017 6.8e-06 55.8 103 32.0
Lj1g0007805 Lotus japonicus HOM05D000007 ORTHO05D000039 6.8e-06 55.8 124 30.6
TWI18G1348 Tripterygium wilfordii HOM05D000007 ORTHO05D000521 6.8e-06 55.8 46 54.3
TAR371G0448 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.8e-06 55.8 71 38.0
vmacro12514 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 6.8e-06 55.8 71 43.7
MBI19_g35549_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 8.8e-06 55.5 125 27.2
QL08p040393 Quercus lobata HOM05D000007 ORTHO05D000039 8.8e-06 55.5 37 62.2


User provided reference genes

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