Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014319 Camellia sinensis var. sinensis HOM05D004882 ORTHO05D005551 0.0e+00 1145.2 610 100.0
CSS0002606 Camellia sinensis var. sinensis HOM05D004882 ORTHO05D005551 0.0e+00 1129.0 616 98.5
Actinidia00336 Actinidia chinensis HOM05D004882 ORTHO05D005551 3.2e-177 625.9 669 59.3
Actinidia02424 Actinidia chinensis HOM05D004882 ORTHO05D005551 9.3e-169 597.8 667 58.9
Rhsim11G0146400 Rhododendron simsii HOM05D004882 ORTHO05D000089 2.0e-155 553.5 636 55.7
CSS0027559 Camellia sinensis var. sinensis HOM05D004882 ORTHO05D005551 4.8e-149 532.3 634 55.8
Dinv16049 Davidia involucrata HOM05D004882 ORTHO05D005551 7.7e-123 445.3 532 55.8
Hma1.2p1_2001F.1_g310650 Hydrangea macrophylla HOM05D004882 ORTHO05D005551 1.5e-110 404.4 641 47.3
Lj5C223T12 Lonicera japonica HOM05D004882 ORTHO05D005551 1.1e-105 388.3 684 43.6
TAR376G0385 Trochodendron aralioides HOM05D004882 ORTHO05D005551 2.7e-96 357.1 684 42.5
TAR628G0407 Trochodendron aralioides HOM05D004882 ORTHO05D005551 8.0e-96 355.5 705 41.3
Nitab4.5_0005609g0020 Nicotiana tabacum HOM05D004882 ORTHO05D005551 2.5e-81 307.4 624 40.5
Cfa004757 Carpinus fangiana HOM05D004882 ORTHO05D005551 2.1e-80 304.3 683 40.1
Nitab4.5_0001477g0110 Nicotiana tabacum HOM05D004882 ORTHO05D005551 6.2e-80 302.8 622 39.4
QL11p027705 Quercus lobata HOM05D004882 ORTHO05D005551 1.4e-79 301.6 672 39.4
Haze_10351 Corylus avellana HOM05D004882 ORTHO05D005551 2.6e-78 297.4 671 39.5
Haze_10355 Corylus avellana HOM05D004882 ORTHO05D005551 5.8e-78 296.2 671 39.3
Nn6g34538 Nelumbo nucifera HOM05D004882 ORTHO05D005551 1.4e-76 291.6 675 38.4
Manes.07G049500 Manihot esculenta HOM05D004882 ORTHO05D005551 5.4e-76 289.7 639 39.3
Cc02_g20370 Coffea canephora HOM05D004882 ORTHO05D005551 2.0e-75 287.7 649 41.0
FAN27G0728 Fragaria x ananassa HOM05D004882 ORTHO05D005551 7.3e-73 279.3 664 36.9
FvH4_2g02560 Fragaria vesca HOM05D004882 ORTHO05D005551 9.5e-73 278.9 664 37.5
FAN24G2723 Fragaria x ananassa HOM05D004882 ORTHO05D005551 9.5e-73 278.9 664 37.5
Sopen01g048900 Solanum pennellii HOM05D004882 ORTHO05D005551 1.2e-72 278.5 634 40.5
Potri.009G081900 Populus trichocarpa HOM05D004882 ORTHO05D005551 2.1e-72 277.7 661 38.1
MD05G1112300 Malus domestica HOM05D004882 ORTHO05D005551 3.6e-72 276.9 664 36.7
FAN15G2336 Fragaria x ananassa HOM05D004882 ORTHO05D005551 1.8e-71 274.6 672 37.4
PGSC0003DMG400005123 Solanum tuberosum HOM05D004882 ORTHO05D005551 3.1e-71 273.9 643 39.7
RcHm_v2.0_Chr6g0246371 Rosa chinensis HOM05D004882 ORTHO05D005551 6.8e-71 272.7 672 37.5
CiPaw.05G024800 Carya illinoinensis HOM05D004882 ORTHO05D005551 3.4e-70 270.4 674 37.5
MSTRG.16657 Avicennia marina HOM05D004882 ORTHO05D005551 5.8e-70 269.6 637 37.7
Thecc.02G034500 Theobroma cacao HOM05D004882 ORTHO05D005551 5.8e-70 269.6 642 39.3
Peaxi162Scf00016g03342 Petunia axillaris HOM05D004882 ORTHO05D005551 9.8e-70 268.9 627 36.7
Solyc01g106540.4 Solanum lycopersicum HOM05D004882 ORTHO05D005551 1.7e-69 268.1 634 39.7
FAN20G2896 Fragaria x ananassa HOM05D004882 ORTHO05D005551 1.1e-68 265.4 672 36.8
Potri.001G287800 Populus trichocarpa HOM05D004882 ORTHO05D005551 6.6e-66 256.1 680 35.4
Cpa.g.sc20.70 Carica papaya HOM05D004882 ORTHO05D005551 3.3e-65 253.8 683 36.6
Eucgr.I02514 Eucalyptus grandis HOM05D004882 ORTHO05D005551 2.8e-64 250.8 648 37.3
Prupe.8G156900 Prunus persica HOM05D004882 ORTHO05D005551 1.4e-63 248.4 462 41.3
Duzib132G0818 Durio zibethinus HOM05D004882 ORTHO05D005551 5.2e-63 246.5 603 38.0
PSO170G1497 Papaver somniferum HOM05D004882 ORTHO05D005551 5.2e-63 246.5 646 37.0
MD10G1114900 Malus domestica HOM05D004882 ORTHO05D005551 6.8e-63 246.1 645 35.8
Oeu008559.3 Olea europaea HOM05D004882 ORTHO05D005551 7.6e-62 242.7 661 36.5
Manes.10G090200 Manihot esculenta HOM05D004882 ORTHO05D005551 8.4e-61 239.2 648 36.1
PSO017G3844 Papaver somniferum HOM05D004882 ORTHO05D005551 1.1e-60 238.8 646 36.8
Oeu025237.1 Olea europaea HOM05D004882 ORTHO05D005551 1.2e-59 235.3 643 37.5
SalBow6G6879 Salvia bowleyana HOM05D004882 ORTHO05D005551 1.2e-59 235.3 615 37.1
Duzib248G0647 Durio zibethinus HOM05D004882 ORTHO05D005551 4.6e-59 233.4 613 37.4
Atru.chr5.2156 Acer truncatum HOM05D004882 ORTHO05D005551 1.3e-58 231.9 640 36.2
TWI59G1177 Tripterygium wilfordii HOM05D004882 ORTHO05D005551 1.1e-57 228.8 646 35.0
Migut.B00500 Erythranthe guttata HOM05D004882 ORTHO05D005551 1.2e-56 225.3 619 35.4
CANSAT25G1117 Cannabis sativa HOM05D004882 ORTHO05D005551 2.8e-56 224.2 671 33.4
HanXRQChr05g0136851 Helianthus annuus HOM05D004882 ORTHO05D005551 1.2e-54 218.8 620 36.0
Gorai.005G262300 Gossypium raimondii HOM05D004882 ORTHO05D005551 2.0e-54 218.0 620 34.0
CSS0049071 Camellia sinensis var. sinensis HOM05D004882 ORTHO05D005551 2.6e-54 217.6 412 44.4
CSS0009679 Camellia sinensis var. sinensis HOM05D004882 ORTHO05D005551 2.2e-53 214.5 363 47.1
Gohir.A03G212800 Gossypium hirsutum HOM05D004882 ORTHO05D005551 6.4e-53 213.0 649 34.7
Sc08g0004240 Simmondsia chinensis HOM05D004882 ORTHO05D005551 5.4e-52 209.9 430 40.2
MBI16_g35720_MAGBIO Magnolia biondii HOM05D004882 ORTHO05D005551 1.6e-51 208.4 644 34.3
AUR62030897 Chenopodium quinoa HOM05D004882 ORTHO05D005551 3.9e-50 203.8 652 32.8
ECA234G1559 Erigeron canadensis HOM05D004882 ORTHO05D005551 3.3e-49 200.7 619 33.3
Lj6g0001174 Lotus japonicus HOM05D004882 ORTHO05D005551 1.4e-47 195.3 641 31.7
GSVIVG01036969001 Vitis vinifera HOM05D004882 ORTHO05D005551 1.4e-47 195.3 561 35.3
COL.COLO4_17832 Corchorus olitorius HOM05D004882 ORTHO05D005551 3.1e-47 194.1 444 39.0
AUR62027054 Chenopodium quinoa HOM05D004882 ORTHO05D005551 9.0e-47 192.6 558 35.1
MELO3C018551.2 Cucumis melo HOM05D004882 ORTHO05D005551 9.9e-46 189.1 722 31.6
Lsat_1_v5_gn_5_110520 Lactuca sativa HOM05D004882 ORTHO05D005551 9.9e-46 189.1 639 33.0
PGR142G0772 Punica granatum HOM05D004882 ORTHO05D005551 2.9e-45 187.6 626 32.1
Gohir.D02G234300 Gossypium hirsutum HOM05D004882 ORTHO05D005551 3.8e-45 187.2 545 34.1
arahy.Tifrunner.gnm1.ann1.6ERH6H Arachis hypogaea HOM05D004882 ORTHO05D005551 6.4e-45 186.4 610 33.8
ClCG02G007390 Citrullus lanatus HOM05D004882 ORTHO05D005551 1.4e-44 185.3 723 30.4
EL10Ac9g22153 Beta vulgaris HOM05D004882 ORTHO05D005551 3.2e-44 184.1 717 31.9
Aqoxy5G00818 Aquilegia oxysepala HOM05D004882 ORTHO05D005551 1.6e-43 181.8 745 29.8
Sed0010536 Sechium edule HOM05D004882 ORTHO05D005551 3.5e-43 180.6 531 35.8
Glyma.15G061700 Glycine max HOM05D004882 ORTHO05D005551 4.6e-43 180.3 640 32.5
Phvul.006G198000 Phaseolus vulgaris HOM05D004882 ORTHO05D005551 1.3e-42 178.7 650 31.1
Lj9A340T57 Lonicera japonica HOM05D004882 ORTHO05D005551 2.3e-42 177.9 517 32.1
Hund06491 Selenicereus undatus HOM05D004882 ORTHO05D005551 3.0e-42 177.6 617 32.6
CsaV3_7G007510 Cucumis sativus L. HOM05D004882 ORTHO05D005551 1.1e-41 175.6 724 30.7
arahy.Tifrunner.gnm1.ann1.189H81 Arachis hypogaea HOM05D004882 ORTHO05D005551 7.4e-41 172.9 612 32.5
DCAR_021925 Daucus carota HOM05D004882 ORTHO05D005551 9.6e-41 172.6 353 39.4
Ciclev10030341m.g Citrus clementina HOM05D004882 ORTHO05D005551 1.6e-40 171.8 498 34.5
vmacro01917 Vaccinium macrocarpon HOM05D004882 ORTHO05D005551 1.6e-40 171.8 119 75.6
Duzib052G0961 Durio zibethinus HOM05D004882 ORTHO05D005551 1.4e-39 168.7 422 39.1
Ah.01g024370 Amaranthus hybridus HOM05D004882 ORTHO05D005551 2.4e-39 167.9 639 31.9
Glyma.13G253200 Glycine max HOM05D004882 ORTHO05D005551 6.9e-39 166.4 651 31.5
Ca_00196_v3 Cicer arietinum L. HOM05D004882 ORTHO05D005551 4.5e-38 163.7 636 31.3
Medtr2g010490 Medicago truncatula HOM05D004882 ORTHO05D005551 5.8e-38 163.3 656 31.1
Aa31LG2G13080 Aethionema arabicum HOM05D004882 ORTHO05D005551 1.7e-37 161.8 619 30.5
VMungo0540G0872 Vigna mungo HOM05D004882 ORTHO05D005551 1.7e-37 161.8 617 31.8
TPR.G32640 Trifolium pratense HOM05D004882 ORTHO05D005551 4.9e-37 160.2 624 31.1
Carub.0007s2442 Capsella rubella HOM05D004882 ORTHO05D005551 5.5e-36 156.8 659 29.6
A01p20310 Brassica napus HOM05D004882 ORTHO05D005551 3.5e-35 154.1 624 32.1
AL7G37720 Arabidopsis lyrata HOM05D004882 ORTHO05D005551 6.0e-35 153.3 669 30.0
Thhalv10024666m.g Eutrema salsugineum HOM05D004882 ORTHO05D005551 3.0e-34 151.0 653 29.4
BraA01t01961Z Brassica rapa HOM05D004882 ORTHO05D005551 2.1e-32 144.8 626 30.7
Sabra09G0063500 Salix brachista HOM05D004882 ORTHO05D005551 6.2e-32 143.3 662 28.9
AT4G17000 Arabidopsis thaliana HOM05D004882 ORTHO05D005551 1.1e-31 142.5 644 29.7
BcaNung00137 Brassica carinata HOM05D004882 ORTHO05D005551 1.1e-31 142.5 621 30.3
Lalb_Chr18g0060201 Lupinus albus HOM05D004882 ORTHO05D005551 1.4e-31 142.1 672 28.9
CSS0001570 Camellia sinensis var. sinensis HOM05D004882 ORTHO05D005551 2.4e-31 141.4 230 46.1
SGA_v2.0_scaffold32G12966 Striga asiatica HOM05D002023 ORTHO05D002049 1.5e-30 138.7 441 31.7
Sp7g17190 Schrenkiella parvula HOM05D004882 ORTHO05D005551 2.6e-30 137.9 540 31.9
BcaC09g50433 Brassica carinata HOM05D004882 ORTHO05D005551 1.3e-29 135.6 628 31.2
BolC1t02498H Brassica oleracea HOM05D004882 ORTHO05D005551 1.3e-29 135.6 623 30.5
Psat1g212160 Pisum sativum HOM05D004882 ORTHO05D005551 2.2e-29 134.8 466 32.2
C01p25470 Brassica napus HOM05D004882 ORTHO05D005551 4.9e-29 133.7 623 30.3
CARHR223560 Cardamine hirsuta HOM05D004882 ORTHO05D005551 1.2e-27 129.0 633 28.9
TAR381G1068 Trochodendron aralioides HOM05D004882 ORTHO05D005551 2.7e-27 127.9 138 56.5
THA.LOC104807193 Tarenaya hassleriana HOM05D004882 ORTHO05D005551 8.7e-26 122.9 620 28.2
BcaB04g18391 Brassica carinata HOM05D004882 ORTHO05D005551 4.1e-23 114.0 610 28.0
Sabra16G0180100 Salix brachista HOM05D004882 ORTHO05D005551 1.3e-18 99.0 648 26.7
ATR0739G125 Amborella trichopoda HOM05D004882 ORTHO05D005551 5.1e-18 97.1 569 28.5
RcHm_v2.0_Chr6g0246631 Rosa chinensis HOM05D004882 ORTHO05D005551 1.9e-17 95.1 93 61.3
THA.LOC104819516 Tarenaya hassleriana HOM05D004882 ORTHO05D005551 1.9e-17 95.1 260 31.5
unitig_21.g20709 Utricularia gibba HOM05D004882 ORTHO05D005551 5.7e-17 93.6 456 28.5
vmacro01916 Vaccinium macrocarpon HOM05D004882 ORTHO05D005551 2.8e-16 91.3 137 50.4
BcaC07g38031 Brassica carinata HOM05D004882 ORTHO05D005551 3.7e-16 90.9 600 26.0
HanXRQChr10g0297671 Helianthus annuus HOM05D004882 ORTHO05D005551 4.1e-15 87.4 105 49.5
TAR381G0477 Trochodendron aralioides HOM05D004882 ORTHO05D005551 2.2e-13 81.6 90 51.1
CDE01G0159 Ceratophyllum demersum HOM05D004882 ORTHO05D005551 2.3e-10 71.6 608 26.6
Os03g0770900 Oryza sativa ssp. japonica HOM05D004882 ORTHO05D005551 4.8e-08 63.9 452 26.3
VMungo0647G2224 Vigna mungo HOM05D004882 ORTHO05D005551 2.0e-06 58.5 66 50.0
Rhsim11G0146600 Rhododendron simsii HOM05D004882 ORTHO05D005551 5.9e-06 57.0 62 58.1


User provided reference genes

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