Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014290 Camellia sinensis var. sinensis HOM05D005107 ORTHO05D006200 3.0e-193 678.3 337 100.0
CSS0028022 Camellia sinensis var. sinensis HOM05D005107 ORTHO05D006200 5.3e-182 641.0 337 95.5
CSS0000196 Camellia sinensis var. sinensis HOM05D005107 ORTHO05D006200 7.0e-142 507.7 343 74.9
Dinv20630 Davidia involucrata HOM05D005107 ORTHO05D006200 6.5e-132 474.6 343 70.6
Hma1.2p1_0592F.1_g185565 Hydrangea macrophylla HOM05D005107 ORTHO05D006200 6.5e-124 448.0 343 67.6
Hma1.2p1_0046F.1_g026720 Hydrangea macrophylla HOM05D005107 ORTHO05D006200 4.7e-122 441.8 343 67.3
GSVIVG01007704001 Vitis vinifera HOM05D005107 ORTHO05D006200 1.1e-115 420.6 344 64.2
TAR374G1030 Trochodendron aralioides HOM05D005107 ORTHO05D006200 2.9e-108 396.0 344 61.0
QL10p008945 Quercus lobata HOM05D005107 ORTHO05D006200 6.6e-108 394.8 345 61.2
Cpa.g.sc153.5 Carica papaya HOM05D005107 ORTHO05D006200 4.3e-107 392.1 344 59.0
Atru.chr9.2518 Acer truncatum HOM05D005107 ORTHO05D006200 9.5e-107 391.0 345 58.3
Prupe.5G170500 Prunus persica HOM05D005107 ORTHO05D006200 1.2e-106 390.6 343 60.6
Thecc.03G018700 Theobroma cacao HOM05D005107 ORTHO05D006200 1.0e-105 387.5 344 57.8
MD14G1176600 Malus domestica HOM05D005107 ORTHO05D006200 2.0e-104 383.3 343 59.2
FvH4_5g05630 Fragaria vesca HOM05D005107 ORTHO05D006200 2.6e-104 382.9 343 58.6
Nitab4.5_0001207g0070 Nicotiana tabacum HOM05D005107 ORTHO05D006200 4.4e-104 382.1 342 58.8
PGSC0003DMG401018164 Solanum tuberosum HOM05D005107 ORTHO05D006200 4.1e-102 375.6 343 58.0
CAN.G1166.21 Capsicum annuum HOM05D005107 ORTHO05D006200 9.2e-102 374.4 343 58.6
RcHm_v2.0_Chr7g0193181 Rosa chinensis HOM05D005107 ORTHO05D006200 1.2e-101 374.0 353 57.2
Sabra12G0063800 Salix brachista HOM05D005107 ORTHO05D006200 2.7e-101 372.9 344 57.8
Sopen03g031750 Solanum pennellii HOM05D005107 ORTHO05D006200 3.5e-101 372.5 343 57.4
Potri.015G079700 Populus trichocarpa HOM05D005107 ORTHO05D006200 4.6e-101 372.1 345 57.7
MD06G1170900 Malus domestica HOM05D005107 ORTHO05D006200 6.0e-101 371.7 343 57.7
Eucgr.B00249 Eucalyptus grandis HOM05D005107 ORTHO05D006200 7.8e-101 371.3 343 56.9
Potri.012G088600 Populus trichocarpa HOM05D005107 ORTHO05D006200 1.3e-100 370.5 344 58.4
TAR622G1391 Trochodendron aralioides HOM05D005107 ORTHO05D006200 5.0e-100 368.6 343 57.4
Sabra15G0104000 Salix brachista HOM05D005107 ORTHO05D006200 1.9e-99 366.7 354 55.1
TWI23G1004 Tripterygium wilfordii HOM05D005107 ORTHO05D006200 5.6e-99 365.2 343 56.6
Aqoxy3G02846 Aquilegia oxysepala HOM05D005107 ORTHO05D006200 9.5e-99 364.4 342 56.7
COL.COLO4_30099 Corchorus olitorius HOM05D005107 ORTHO05D006200 9.5e-99 364.4 344 54.9
Actinidia19110 Actinidia chinensis HOM05D005107 ORTHO05D006200 1.6e-98 363.6 318 61.6
Gohir.D12G273300 Gossypium hirsutum HOM05D005107 ORTHO05D006200 1.6e-98 363.6 344 54.9
Gorai.008G293700 Gossypium raimondii HOM05D005107 ORTHO05D006200 2.1e-98 363.2 344 54.7
Solyc03g112670.3 Solanum lycopersicum HOM05D005107 ORTHO05D006200 2.8e-98 362.8 343 56.6
CiPaw.11G023500 Carya illinoinensis HOM05D005107 ORTHO05D006200 8.1e-98 361.3 345 59.7
Gohir.A12G272600 Gossypium hirsutum HOM05D005107 ORTHO05D006200 2.3e-97 359.8 344 54.1
Dinv38563 Davidia involucrata HOM05D003072 ORTHO05D008464 6.8e-97 358.2 259 70.3
Peaxi162Scf00089g01740 Petunia axillaris HOM05D005107 ORTHO05D006200 6.8e-97 358.2 326 57.1
Gorai.001G071700 Gossypium raimondii HOM05D005107 ORTHO05D006200 2.6e-96 356.3 344 53.5
Nitab4.5_0003229g0090 Nicotiana tabacum HOM05D005107 ORTHO05D006200 2.6e-96 356.3 323 57.6
FAN04G1011 Fragaria x ananassa HOM05D005107 ORTHO05D006200 3.4e-96 355.9 343 56.9
Duzib205G0074 Durio zibethinus HOM05D005107 ORTHO05D006200 4.4e-96 355.5 336 54.8
Gohir.D07G068200 Gossypium hirsutum HOM05D005107 ORTHO05D006200 2.2e-95 353.2 344 53.8
FAN18G1528 Fragaria x ananassa HOM05D005107 ORTHO05D006200 4.9e-95 352.1 343 56.3
Cc06_g17290 Coffea canephora HOM05D005107 ORTHO05D006200 3.2e-94 349.4 334 56.0
Migut.O00123 Erythranthe guttata HOM05D005107 ORTHO05D006200 9.2e-94 347.8 344 53.8
Gohir.A07G063500 Gossypium hirsutum HOM05D005107 ORTHO05D006200 1.2e-93 347.4 344 52.0
Ciclev10021009m.g Citrus clementina HOM05D005107 ORTHO05D006200 2.7e-93 346.3 342 55.8
CANSAT80G2623 Cannabis sativa HOM05D005107 ORTHO05D006200 3.5e-93 345.9 344 52.6
FAN08G1807 Fragaria x ananassa HOM05D005107 ORTHO05D006200 3.5e-93 345.9 344 56.4
MSTRG.23144 Avicennia marina HOM05D005107 ORTHO05D006200 6.0e-93 345.1 344 52.3
Sc22g0001200 Simmondsia chinensis HOM05D005107 ORTHO05D006200 6.0e-93 345.1 343 53.4
Manes.06G107100 Manihot esculenta HOM05D005107 ORTHO05D006200 3.0e-92 342.8 344 54.7
SalBow5G2679 Salvia bowleyana HOM05D005107 ORTHO05D006200 3.0e-92 342.8 346 52.6
Oeu016417.1 Olea europaea HOM05D005107 ORTHO05D006200 3.9e-92 342.4 328 54.9
Nn2g12593 Nelumbo nucifera HOM05D005107 ORTHO05D006200 1.1e-91 340.9 345 54.5
Sp2g26180 Schrenkiella parvula HOM05D005107 ORTHO05D006200 1.9e-91 340.1 347 52.2
PGR083G1692 Punica granatum HOM05D005107 ORTHO05D006200 7.3e-91 338.2 347 54.2
Carub.0008s2376 Capsella rubella HOM05D005107 ORTHO05D006200 3.6e-90 335.9 347 50.4
Lj1g0017341 Lotus japonicus HOM05D005107 ORTHO05D006200 4.7e-90 335.5 342 52.3
Nn4g22685 Nelumbo nucifera HOM05D005107 ORTHO05D006200 4.7e-90 335.5 343 52.5
Nn4g22690 Nelumbo nucifera HOM05D005107 ORTHO05D006200 4.7e-90 335.5 343 52.5
AL8G40070 Arabidopsis lyrata HOM05D005107 ORTHO05D006200 1.1e-89 334.3 347 50.4
CARHR276850 Cardamine hirsuta HOM05D005107 ORTHO05D006200 1.1e-89 334.3 346 49.7
ClCG01G013290 Citrullus lanatus HOM05D005107 ORTHO05D006200 6.8e-89 331.6 343 53.6
Haze_07542 Corylus avellana HOM05D005107 ORTHO05D006200 1.2e-88 330.9 289 61.6
Thhalv10004512m.g Eutrema salsugineum HOM05D005107 ORTHO05D006200 1.2e-88 330.9 347 51.3
Lj4g0022030 Lotus japonicus HOM05D005107 ORTHO05D006200 4.4e-88 328.9 342 52.6
TWI14G0467 Tripterygium wilfordii HOM05D005107 ORTHO05D006200 9.9e-88 327.8 343 52.2
BolC9t53818H Brassica oleracea HOM05D005107 ORTHO05D006200 2.9e-87 326.2 347 47.8
PSO063G3062 Papaver somniferum HOM05D005107 ORTHO05D006200 3.7e-87 325.9 346 51.4
AT5G63050 Arabidopsis thaliana HOM05D005107 ORTHO05D006200 1.4e-86 323.9 347 49.6
VMungo1309G0437 Vigna mungo HOM05D005107 ORTHO05D006200 1.4e-86 323.9 343 49.9
Peaxi162Scf00255g00912 Petunia axillaris HOM05D005107 ORTHO05D006200 2.4e-86 323.2 344 50.9
Lalb_Chr08g0236621 Lupinus albus HOM05D005107 ORTHO05D006200 4.1e-86 322.4 343 50.7
PSO832G2872 Papaver somniferum HOM05D005107 ORTHO05D006200 7.1e-86 321.6 348 52.0
Phvul.009G176100 Phaseolus vulgaris HOM05D005107 ORTHO05D006200 7.1e-86 321.6 343 49.6
Glyma.06G180400 Glycine max HOM05D005107 ORTHO05D006200 9.2e-86 321.2 343 51.3
Sed0009116 Sechium edule HOM05D005107 ORTHO05D006200 9.2e-86 321.2 342 51.8
Glyma.04G185700 Glycine max HOM05D005107 ORTHO05D006200 1.2e-85 320.9 343 49.6
A09p08000 Brassica napus HOM05D005107 ORTHO05D006200 2.1e-85 320.1 338 48.8
Migut.D01962 Erythranthe guttata HOM05D005107 ORTHO05D006200 2.1e-85 320.1 343 51.0
EL10Ac2g03054 Beta vulgaris HOM05D005107 ORTHO05D006200 2.7e-85 319.7 339 50.1
DCAR_016047 Daucus carota HOM05D005107 ORTHO05D006200 2.7e-85 319.7 339 50.7
Aa31LG11G620 Aethionema arabicum HOM05D005107 ORTHO05D006200 5.1e-84 315.5 340 48.2
C09p09050 Brassica napus HOM05D005107 ORTHO05D006200 8.6e-84 314.7 338 47.6
MBI10_g44387_MAGBIO Magnolia biondii HOM05D005107 ORTHO05D006200 8.6e-84 314.7 338 53.6
TPR.G37531 Trifolium pratense HOM05D005107 ORTHO05D006200 3.3e-83 312.8 342 49.7
arahy.Tifrunner.gnm1.ann1.5AH6W7 Arachis hypogaea HOM05D005107 ORTHO05D006200 9.6e-83 311.2 342 49.4
arahy.Tifrunner.gnm1.ann1.6379ZA Arachis hypogaea HOM05D005107 ORTHO05D006200 6.2e-82 308.5 342 49.4
Ca_21938_v3 Cicer arietinum L. HOM05D005107 ORTHO05D006200 1.1e-81 307.8 342 49.1
Lj9C446G12 Lonicera japonica HOM05D004430 ORTHO05D005088 1.4e-81 307.4 343 52.5
SalBow6G4644 Salvia bowleyana HOM05D005107 ORTHO05D006200 1.4e-81 307.4 343 46.6
Ca_16156_v3 Cicer arietinum L. HOM05D005107 ORTHO05D006200 2.4e-81 306.6 342 48.0
Medtr4g105500 Medicago truncatula HOM05D005107 ORTHO05D006200 3.1e-81 306.2 333 49.2
Ah.10g031930 Amaranthus hybridus HOM05D005107 ORTHO05D006200 4.0e-81 305.8 340 50.3
MELO3C002281.2 Cucumis melo HOM05D005107 ORTHO05D006200 5.2e-81 305.4 345 50.1
HanXRQChr05g0154601 Helianthus annuus HOM05D005107 ORTHO05D006200 1.5e-80 303.9 345 53.6
FAN18G1595 Fragaria x ananassa HOM05D005107 ORTHO05D008464 2.6e-80 303.1 318 53.1
Phvul.003G202200 Phaseolus vulgaris HOM05D005107 ORTHO05D006200 5.8e-80 302.0 342 48.5
Manes.14G063800 Manihot esculenta HOM05D005107 ORTHO05D006200 1.3e-79 300.8 306 55.2
FAN13G2858 Fragaria x ananassa HOM05D005107 ORTHO05D008464 6.4e-79 298.5 318 53.1
CsaV3_1G008660 Cucumis sativus L. HOM05D005107 ORTHO05D006200 4.2e-78 295.8 338 50.0
THA.LOC104818212 Tarenaya hassleriana HOM05D005107 ORTHO05D006200 4.2e-78 295.8 347 47.6
Psat4g058600 Pisum sativum HOM05D005107 ORTHO05D006200 5.4e-78 295.4 342 46.8
THA.LOC104821481 Tarenaya hassleriana HOM05D005107 ORTHO05D006200 1.2e-77 294.3 345 47.2
TWI39G0316 Tripterygium wilfordii HOM05D005107 ORTHO05D006200 2.1e-77 293.5 346 49.1
A06p29810 Brassica napus HOM05D005107 ORTHO05D006200 2.7e-77 293.1 346 45.4
VMungo1215G1987 Vigna mungo HOM05D005107 ORTHO05D006200 2.7e-77 293.1 344 47.4
BraA06t25929Z Brassica rapa HOM05D005107 ORTHO05D006200 3.5e-77 292.7 347 45.5
BraA09t36452Z Brassica rapa HOM05D005107 ORTHO05D006200 3.5e-77 292.7 293 52.2
BolC8t50877H Brassica oleracea HOM05D005107 ORTHO05D006200 1.3e-76 290.8 344 46.2
HanXRQChr08g0235041 Helianthus annuus HOM05D005107 ORTHO05D006200 3.0e-76 289.7 344 49.1
BcaB04g19949 Brassica carinata HOM05D005107 ORTHO05D006200 2.5e-75 286.6 292 52.4
BolC3t18614H Brassica oleracea HOM05D005107 ORTHO05D006200 5.6e-75 285.4 344 45.9
Lsat_1_v5_gn_5_15301 Lactuca sativa HOM05D005107 ORTHO05D006200 7.3e-75 285.0 338 49.7
ECA246G1934 Erigeron canadensis HOM05D005107 ORTHO05D006200 2.8e-74 283.1 333 49.5
AUR62018143 Chenopodium quinoa HOM05D005107 ORTHO05D006200 1.1e-73 281.2 307 50.5
AUR62042560 Chenopodium quinoa HOM05D005107 ORTHO05D006200 1.8e-73 280.4 307 50.5
Sed0010155 Sechium edule HOM05D005107 ORTHO05D006200 3.1e-73 279.6 344 47.4
C08p32660 Brassica napus HOM05D005107 ORTHO05D006200 5.3e-73 278.9 337 45.4
Medtr3g077490 Medicago truncatula HOM05D005107 ORTHO05D006200 5.3e-73 278.9 345 46.7
TPR.G14919 Trifolium pratense HOM05D005107 ORTHO05D006200 5.3e-73 278.9 345 47.0
Lj5A126T86 Lonicera japonica HOM05D005107 ORTHO05D006200 5.8e-72 275.4 279 55.2
Psat5g115520 Pisum sativum HOM05D005107 ORTHO05D006200 2.9e-71 273.1 344 45.9
BcaC01g02550 Brassica carinata HOM05D005107 ORTHO05D006200 7.9e-69 265.0 342 44.4
CiPaw.12G028400 Carya illinoinensis HOM05D005107 ORTHO05D006200 1.3e-66 257.7 333 45.9
unitig_26.g9615 Utricularia gibba HOM05D005107 ORTHO05D006200 4.5e-64 249.2 325 44.0
ClCG06G017120 Citrullus lanatus HOM05D005107 ORTHO05D006200 1.4e-62 244.2 329 42.9
CDE05G1562 Ceratophyllum demersum HOM05D005107 ORTHO05D006200 2.3e-60 236.9 280 48.6
Oeu024703.1 Olea europaea HOM05D005107 ORTHO05D006200 1.4e-57 227.6 198 58.6
ECA232G4933 Erigeron canadensis HOM05D005107 ORTHO05D006200 2.6e-56 223.4 337 40.9
Hund13172 Selenicereus undatus HOM05D005107 ORTHO05D006200 2.6e-56 223.4 328 41.8
MELO3C026284.2 Cucumis melo HOM05D005107 ORTHO05D006200 1.0e-55 221.5 339 38.9
C03p63570 Brassica napus HOM05D005107 ORTHO05D006200 2.9e-55 219.9 305 41.0
ECA232G2224 Erigeron canadensis HOM05D005107 ORTHO05D006200 1.5e-51 207.6 237 46.8
HPP92_001300 Vanilla planifolia HOM05D005107 ORTHO05D006200 1.9e-51 207.2 344 39.0
HanXRQChr02g0035961 Helianthus annuus HOM05D005107 ORTHO05D006200 2.5e-51 206.8 287 44.6
Eucgr.J01240 Eucalyptus grandis HOM05D005107 ORTHO05D006200 1.4e-46 191.0 137 65.7
SGA_v2.0_scaffold90G27886 Striga asiatica HOM05D005107 ORTHO05D006200 4.6e-45 186.0 211 44.1
Eucgr.C04410 Eucalyptus grandis HOM05D005107 ORTHO05D006200 1.1e-43 181.4 137 63.5
Lsat_1_v5_gn_1_28200 Lactuca sativa HOM05D005107 ORTHO05D006200 3.3e-43 179.9 329 39.2
BcaB02g09719 Brassica carinata HOM05D005107 ORTHO05D006200 1.3e-42 177.9 341 35.8
Eucgr.C03135 Eucalyptus grandis HOM05D005107 ORTHO05D006200 8.2e-42 175.3 129 63.6
BcaC04g23368 Brassica carinata HOM05D005107 ORTHO05D006200 2.2e-26 124.0 103 57.3
Duzib068G0452 Durio zibethinus HOM05D005107 ORTHO05D006200 4.8e-18 96.3 132 44.7
Actinidia19336 Actinidia chinensis HOM05D005107 ORTHO05D006200 2.6e-11 73.9 71 52.1
Hma1.2p1_0522F.1_g171880 Hydrangea macrophylla HOM05D005107 ORTHO05D006200 3.1e-09 67.0 46 67.4
SEGI_21940 Sequoiadendron giganteum HOM05D024261 ORTHO05D006200 7.0e-09 65.9 248 24.6
ATR1152G005 Amborella trichopoda HOM05D005107 ORTHO05D006200 7.2e-06 55.8 205 26.3


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