Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014280 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D024710 5.6e-72 274.2 147 100.0
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.7e-65 250.4 161 87.6
CSS0017473 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.7e-65 250.4 161 87.6
CSS0021320 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.7e-65 250.4 161 87.6
CSS0050513 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.7e-65 250.4 161 87.6
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.5e-64 248.8 161 87.0
CSS0013580 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.5e-64 248.8 161 87.0
CSS0004257 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.3e-64 248.1 161 87.0
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.8e-63 244.6 161 86.3
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.8e-63 244.6 161 86.3
CSS0023792 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-58 229.9 161 82.0
CSS0038450 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.9e-53 211.1 113 98.2
CSS0010221 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D020238 1.7e-28 129.8 148 55.4
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.6e-21 106.7 146 47.3
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.6e-21 106.7 146 47.3
vmacro13746 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 2.9e-20 102.4 161 44.1
vmacro22863 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 2.9e-20 102.4 161 44.1
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 8.6e-20 100.9 139 43.2
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.2e-18 97.1 158 43.0
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 4.0e-17 92.0 158 42.4
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 4.0e-17 92.0 158 42.4
CSS0009093 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-16 90.5 149 46.3
CSS0039293 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-16 90.5 149 46.3
CSS0000195 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.5e-16 90.1 149 46.3
CSS0003077 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.5e-16 90.1 149 46.3
CSS0019281 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.5e-16 90.1 149 46.3
CSS0021750 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.5e-16 90.1 149 46.3
CSS0042573 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.5e-16 90.1 149 46.3
CSS0006274 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.4e-16 88.6 149 46.3
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 1.7e-15 86.7 166 37.3
SHI25538 Sapria himalayana HOM05D002460 ORTHO05D002716 1.7e-15 86.7 146 43.2
Ciclev10033751m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.1e-14 84.0 124 42.7
Rhsim04G0125600 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.1e-14 84.0 158 41.1
CSS0042927 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.1e-14 82.4 150 45.3
CSS0010831 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-13 80.5 129 45.7
Rhsim12G0116000 Rhododendron simsii HOM05D028291 ORTHO05D020238 1.6e-13 80.1 131 40.5
CSS0004495 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.7e-13 79.3 149 40.9
Ciclev10003979m.g Citrus clementina HOM05D001576 ORTHO05D000401 3.8e-12 75.5 145 37.2
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 8.6e-12 74.3 154 35.1
Rhsim07G0156400 Rhododendron simsii HOM05D001576 ORTHO05D000401 4.3e-11 72.0 140 40.7
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.3e-11 72.0 144 38.2
TWI60G0823 Tripterygium wilfordii HOM05D001576 ORTHO05D010240 2.8e-10 69.3 144 38.2
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 8.0e-10 67.8 158 35.4
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.8e-09 66.6 144 36.8
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 3.1e-09 65.9 160 36.2
Ciclev10018206m.g Citrus clementina HOM05D001576 ORTHO05D000401 6.8e-09 64.7 145 35.2
TWI74G0871 Tripterygium wilfordii HOM05D025099 ORTHO05D000401 1.5e-08 63.5 165 35.8
Haze_12994 Corylus avellana HOM05D001576 ORTHO05D000401 2.0e-08 63.2 146 35.6
TWI15G0796 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.3e-07 60.5 146 34.2
TWI31G0674 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.3e-07 60.5 146 34.2
TWI75G1615 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.7e-07 60.1 129 34.9
Rhsim12G0091400 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.2e-07 59.7 159 33.3
TWI38G1366 Tripterygium wilfordii HOM05D025099 ORTHO05D000401 2.2e-07 59.7 151 34.4
Rhsim10G0086400 Rhododendron simsii HOM05D028291 ORTHO05D020238 3.7e-07 58.9 111 36.9
FvH4_7g13271 Fragaria vesca HOM05D001576 ORTHO05D000401 6.4e-07 58.2 134 38.1
RcHm_v2.0_Chr2g0105031 Rosa chinensis HOM05D001576 ORTHO05D010219 1.9e-06 56.6 151 33.8
RcHm_v2.0_Chr7g0231991 Rosa chinensis HOM05D001576 ORTHO05D010219 1.9e-06 56.6 151 33.8
CiPaw.03G129800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.4e-06 56.2 142 35.2
Haze_08540 Corylus avellana HOM05D058381 ORTHO05D020238 3.2e-06 55.8 146 33.6
DCAR_001891 Daucus carota HOM05D028169 ORTHO05D024710 7.0e-06 54.7 114 36.0
FAN05G3062 Fragaria x ananassa HOM05D001576 ORTHO05D000401 7.0e-06 54.7 133 38.3
Rhsim06G0075000 Rhododendron simsii HOM05D001576 ORTHO05D000401 9.2e-06 54.3 102 40.2


User provided reference genes

Program Settings