Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014230 Camellia sinensis var. sinensis HOM05D000213 ORTHO05D000426 3.6e-83 311.6 168 100.0
Dinv13645 Davidia involucrata HOM05D000213 ORTHO05D000426 2.5e-55 219.2 176 68.2
Lj1A1158T19 Lonicera japonica HOM05D000213 ORTHO05D000426 7.4e-44 181.0 189 60.3
GSVIVG01021765001 Vitis vinifera HOM05D000213 ORTHO05D000426 2.4e-42 176.0 186 62.4
Haze_05945 Corylus avellana HOM05D000213 ORTHO05D000426 2.0e-41 172.9 187 57.8
Potri.001G460600 Populus trichocarpa HOM05D000213 ORTHO05D000426 1.1e-39 167.2 181 56.4
Cfa000770 Carpinus fangiana HOM05D000213 ORTHO05D000426 9.4e-39 164.1 183 55.7
CiPaw.09G147900 Carya illinoinensis HOM05D000213 ORTHO05D000426 8.0e-38 161.0 183 57.4
Potri.011G157100 Populus trichocarpa HOM05D000213 ORTHO05D000426 1.4e-37 160.2 179 55.3
QL05p064626 Quercus lobata HOM05D000213 ORTHO05D000426 1.4e-37 160.2 188 55.3
Duzib192G0857 Durio zibethinus HOM05D000213 ORTHO05D000426 1.8e-37 159.8 165 57.0
Sabra16G0312300 Salix brachista HOM05D000213 ORTHO05D000426 3.0e-37 159.1 184 56.0
Phvul.006G123000 Phaseolus vulgaris HOM05D000213 ORTHO05D000426 5.2e-37 158.3 180 52.2
TAR624G0671 Trochodendron aralioides HOM05D000213 ORTHO05D000426 6.7e-37 157.9 182 56.6
Manes.14G126300 Manihot esculenta HOM05D000213 ORTHO05D000426 2.6e-36 156.0 168 56.5
VMungo0540G1891 Vigna mungo HOM05D000213 ORTHO05D000426 1.7e-35 153.3 191 49.7
MBI02_g07699_MAGBIO Magnolia biondii HOM05D000213 ORTHO05D000426 6.3e-35 151.4 189 54.5
Sabra11G0142900 Salix brachista HOM05D000213 ORTHO05D000426 6.3e-35 151.4 175 53.1
Thecc.06G008500 Theobroma cacao HOM05D000213 ORTHO05D000426 1.4e-34 150.2 172 58.7
Manes.06G051300 Manihot esculenta HOM05D000213 ORTHO05D000426 1.8e-34 149.8 187 51.3
Medtr2g032030 Medicago truncatula HOM05D000213 ORTHO05D000426 5.3e-34 148.3 173 50.9
Duzib235G0569 Durio zibethinus HOM05D000213 ORTHO05D000426 1.2e-33 147.1 168 55.4
Eucgr.K01971 Eucalyptus grandis HOM05D000213 ORTHO05D000426 1.2e-33 147.1 190 52.1
MD05G1265200 Malus domestica HOM05D000213 ORTHO05D000426 1.2e-33 147.1 193 52.3
Ciclev10014984m.g Citrus clementina HOM05D000213 ORTHO05D000426 1.6e-33 146.7 205 50.2
Ca_00928_v3 Cicer arietinum L. HOM05D000213 ORTHO05D000426 2.7e-33 146.0 168 53.0
TPR.G8036 Trifolium pratense HOM05D000213 ORTHO05D000426 4.5e-33 145.2 170 52.4
FvH4_3g11140 Fragaria vesca HOM05D000213 ORTHO05D000426 1.0e-32 144.1 210 50.5
FAN11G1861 Fragaria x ananassa HOM05D000213 ORTHO05D000426 1.0e-32 144.1 210 50.5
MD10G1243000 Malus domestica HOM05D000213 ORTHO05D000426 1.0e-32 144.1 192 50.5
Actinidia29241 Actinidia chinensis HOM05D000213 ORTHO05D000426 1.3e-32 143.7 191 57.6
Lalb_Chr20g0120251 Lupinus albus HOM05D000213 ORTHO05D000426 1.3e-32 143.7 188 51.1
Prupe.4G101100 Prunus persica HOM05D000213 ORTHO05D000426 1.7e-32 143.3 184 54.3
FAN25G0578 Fragaria x ananassa HOM05D000213 ORTHO05D000426 2.2e-32 142.9 210 50.0
FAN21G2150 Fragaria x ananassa HOM05D000213 ORTHO05D000426 3.8e-32 142.1 212 49.1
Lalb_Chr18g0058341 Lupinus albus HOM05D000213 ORTHO05D000426 8.5e-32 141.0 170 52.9
Psat1g164280 Pisum sativum HOM05D000213 ORTHO05D000426 8.5e-32 141.0 191 48.7
RcHm_v2.0_Chr5g0018041 Rosa chinensis HOM05D000213 ORTHO05D000426 1.5e-31 140.2 210 50.0
Oeu060326.1 Olea europaea HOM05D000213 ORTHO05D000426 1.9e-31 139.8 174 52.9
Oeu052709.1 Olea europaea HOM05D000213 ORTHO05D000426 2.5e-31 139.4 174 54.6
Gohir.D05G112600 Gossypium hirsutum HOM05D000213 ORTHO05D000426 4.2e-31 138.7 172 54.7
Gorai.009G116800 Gossypium raimondii HOM05D000213 ORTHO05D000426 4.2e-31 138.7 172 54.7
FAN16G1136 Fragaria x ananassa HOM05D000213 ORTHO05D000426 7.2e-31 137.9 208 48.1
Nn7g37776 Nelumbo nucifera HOM05D000213 ORTHO05D000426 1.6e-30 136.7 185 51.4
Rhsim13G0125600 Rhododendron simsii HOM05D000213 ORTHO05D000426 2.1e-30 136.3 216 48.6
Glyma.09G029800 Glycine max HOM05D000213 ORTHO05D000426 2.7e-30 136.0 174 52.3
Gohir.A05G112200 Gossypium hirsutum HOM05D000213 ORTHO05D000426 4.7e-30 135.2 172 55.8
vmacro03464 Vaccinium macrocarpon HOM05D000213 ORTHO05D000426 6.1e-30 134.8 210 49.5
Actinidia07481 Actinidia chinensis HOM05D000213 ORTHO05D000426 5.2e-29 131.7 190 54.2
PGR083G0434 Punica granatum HOM05D000213 ORTHO05D000426 6.8e-29 131.3 162 49.4
Lj6g0017305 Lotus japonicus HOM05D000213 ORTHO05D000426 8.8e-29 131.0 174 47.7
Glyma.15G135600 Glycine max HOM05D000213 ORTHO05D000426 1.5e-28 130.2 162 53.1
Dinv40939 Davidia involucrata HOM05D000213 ORTHO05D000426 3.4e-28 129.0 178 51.7
ATR0763G073 Amborella trichopoda HOM05D000213 ORTHO05D000426 2.8e-27 125.9 190 47.4
MSTRG.16307 Avicennia marina HOM05D000213 ORTHO05D000426 2.8e-27 125.9 186 45.2
CAN.G39.29 Capsicum annuum HOM05D000213 ORTHO05D000426 6.3e-27 124.8 180 50.6
Aqoxy1G01466 Aquilegia oxysepala HOM05D000213 ORTHO05D000426 1.8e-26 123.2 185 49.2
DCAR_007815 Daucus carota HOM05D000213 ORTHO05D000426 3.1e-26 122.5 182 51.1
Lalb_Chr15g0088981 Lupinus albus HOM05D000213 ORTHO05D000426 3.1e-26 122.5 165 52.1
Peaxi162Scf00155g00044 Petunia axillaris HOM05D000213 ORTHO05D000426 7.0e-26 121.3 179 46.9
Oeu000498.1 Olea europaea HOM05D000213 ORTHO05D000426 1.2e-25 120.6 148 50.0
Oeu063152.1 Olea europaea HOM05D000213 ORTHO05D000426 5.9e-25 118.2 140 52.9
Cc09_g07330 Coffea canephora HOM05D000213 ORTHO05D000426 7.7e-25 117.9 169 49.1
Nitab4.5_0000076g0020 Nicotiana tabacum HOM05D000213 ORTHO05D000426 1.0e-24 117.5 166 49.4
PGSC0003DMG400015104 Solanum tuberosum HOM05D000213 ORTHO05D000426 2.2e-24 116.3 154 48.1
Nitab4.5_0000607g0130 Nicotiana tabacum HOM05D000213 ORTHO05D000426 6.5e-24 114.8 166 47.0
Solyc02g021680.3 Solanum lycopersicum HOM05D000213 ORTHO05D000426 8.5e-24 114.4 162 45.7
Sopen02g006270 Solanum pennellii HOM05D000213 ORTHO05D000426 8.5e-24 114.4 161 47.8
CDE05G0814 Ceratophyllum demersum HOM05D000213 ORTHO05D000426 1.9e-23 113.2 158 46.8
COL.COLO4_26884 Corchorus olitorius HOM05D000213 ORTHO05D000426 1.9e-23 113.2 194 49.5
TWI63G1118 Tripterygium wilfordii HOM05D000213 ORTHO05D000426 5.5e-23 111.7 169 48.5
arahy.Tifrunner.gnm1.ann1.R65J70 Arachis hypogaea HOM05D000213 ORTHO05D000426 1.6e-22 110.2 195 43.6
MBI18_g27140_MAGBIO Magnolia biondii HOM05D000213 ORTHO05D000426 2.7e-22 109.4 168 48.2
arahy.Tifrunner.gnm1.ann1.T5S8G4 Arachis hypogaea HOM05D000213 ORTHO05D000426 4.7e-22 108.6 194 43.3
Atru.chr10.684 Acer truncatum HOM05D000213 ORTHO05D000426 1.0e-21 107.5 215 45.6
PSO675G1755 Papaver somniferum HOM05D000213 ORTHO05D000426 2.3e-21 106.3 208 45.7
DCAR_005640 Daucus carota HOM05D000213 ORTHO05D000426 3.0e-21 105.9 165 46.7
CDE01G0716 Ceratophyllum demersum HOM05D000213 ORTHO05D000426 5.2e-21 105.1 157 47.8
MSTRG.14806 Avicennia marina HOM05D000213 ORTHO05D000426 8.8e-21 104.4 164 45.7
Sc24g0002540 Simmondsia chinensis HOM05D000213 ORTHO05D000426 1.5e-20 103.6 175 41.7
SGA_v2.0_scaffold1G00295 Striga asiatica HOM05D000213 ORTHO05D000426 1.7e-19 100.1 152 48.0
CDE04G3309 Ceratophyllum demersum HOM05D000213 ORTHO05D000426 2.2e-19 99.8 157 45.2
PSO541G1260 Papaver somniferum HOM05D000213 ORTHO05D000426 2.2e-19 99.8 206 42.2
AL1G44710 Arabidopsis lyrata HOM05D000213 ORTHO05D000426 3.7e-19 99.0 167 45.5
Thhalv10007691m.g Eutrema salsugineum HOM05D000213 ORTHO05D000426 3.7e-19 99.0 169 48.5
Hund28813 Selenicereus undatus HOM05D000213 ORTHO05D000426 4.9e-19 98.6 150 46.0
Hund28815 Selenicereus undatus HOM05D000213 ORTHO05D000426 4.9e-19 98.6 150 46.0
Carub.0001s2891 Capsella rubella HOM05D000213 ORTHO05D000426 1.1e-18 97.4 162 45.1
AT1G30650 Arabidopsis thaliana HOM05D000213 ORTHO05D000426 1.8e-18 96.7 162 45.1
BcaB03g13822 Brassica carinata HOM05D000213 ORTHO05D000426 3.1e-18 95.9 165 43.6
CARHR128990 Cardamine hirsuta HOM05D000213 ORTHO05D000426 7.0e-18 94.7 168 45.8
AUR62030160 Chenopodium quinoa HOM05D000213 ORTHO05D000426 7.0e-18 94.7 172 47.1
SalBow8G1308 Salvia bowleyana HOM05D000213 ORTHO05D000426 9.2e-18 94.4 147 49.7
CANSAT35G1159 Cannabis sativa HOM05D000213 ORTHO05D000426 1.6e-17 93.6 215 35.8
C04p13930 Brassica napus HOM05D000213 ORTHO05D000426 2.0e-17 93.2 162 43.8
BolC4t22982H Brassica oleracea HOM05D000213 ORTHO05D000426 2.0e-17 93.2 162 43.8
A05p10830 Brassica napus HOM05D000213 ORTHO05D000426 2.7e-17 92.8 161 46.6
BraA05t20028Z Brassica rapa HOM05D000213 ORTHO05D000426 2.7e-17 92.8 161 46.6
Cpa.g.sc2011.1 Carica papaya HOM05D000213 ORTHO05D000426 3.5e-17 92.4 200 37.5
BolC7t42005H Brassica oleracea HOM05D000213 ORTHO05D000426 4.5e-17 92.0 164 43.3
CDE12G0437 Ceratophyllum demersum HOM05D000213 ORTHO05D000426 4.5e-17 92.0 156 44.2
BcaC02g11565 Brassica carinata HOM05D000213 ORTHO05D000426 5.9e-17 91.7 163 43.6
A04p26600 Brassica napus HOM05D000213 ORTHO05D000426 5.9e-17 91.7 160 42.5
C04p64020 Brassica napus HOM05D000213 ORTHO05D000426 5.9e-17 91.7 160 42.5
AUR62002702 Chenopodium quinoa HOM05D000213 ORTHO05D000426 5.9e-17 91.7 173 46.8
Glyma.05G123600 Glycine max HOM05D000213 ORTHO05D000426 1.0e-16 90.9 157 49.7
SGA_v2.0_scaffold341G49388 Striga asiatica HOM05D000213 ORTHO05D000426 1.7e-16 90.1 147 42.9
BolC4t27876H Brassica oleracea HOM05D000213 ORTHO05D000426 3.8e-16 89.0 162 43.8
HanXRQChr04g0119191 Helianthus annuus HOM05D000213 ORTHO05D000426 3.8e-16 89.0 149 45.6
A07p09760 Brassica napus HOM05D000213 ORTHO05D000426 5.0e-16 88.6 158 40.5
C07p15030 Brassica napus HOM05D000213 ORTHO05D000426 5.0e-16 88.6 165 43.0
TWI38G0238 Tripterygium wilfordii HOM05D000213 ORTHO05D000426 5.0e-16 88.6 181 43.6
BraA07t28769Z Brassica rapa HOM05D000213 ORTHO05D000426 6.6e-16 88.2 158 40.5
Sp4g17110 Schrenkiella parvula HOM05D000213 ORTHO05D000426 6.6e-16 88.2 175 46.3
Phvul.002G202000 Phaseolus vulgaris HOM05D000213 ORTHO05D000426 1.5e-15 87.0 163 41.1
SGA_v2.0_scaffold223G42880 Striga asiatica HOM05D000213 ORTHO05D000426 1.5e-15 87.0 158 40.5
Aa31LG10G6470 Aethionema arabicum HOM05D000213 ORTHO05D000426 1.9e-15 86.7 164 39.6
BcaB02g09504 Brassica carinata HOM05D000213 ORTHO05D000426 1.9e-15 86.7 162 45.1
CARHR030130 Cardamine hirsuta HOM05D000213 ORTHO05D000426 1.9e-15 86.7 164 42.7
BraA04t18165Z Brassica rapa HOM05D000213 ORTHO05D000426 3.3e-15 85.9 160 42.5
Lsat_1_v5_gn_7_29520 Lactuca sativa HOM05D000213 ORTHO05D000426 5.6e-15 85.1 148 43.2
Thhalv10016714m.g Eutrema salsugineum HOM05D000213 ORTHO05D000426 9.5e-15 84.3 172 42.4
Zm00001eb251530 Zea mays HOM05D000213 ORTHO05D000426 9.5e-15 84.3 210 33.8
Sed0009059 Sechium edule HOM05D000213 ORTHO05D000426 1.2e-14 84.0 173 41.6
Sp1g26550 Schrenkiella parvula HOM05D000213 ORTHO05D000426 1.6e-14 83.6 160 46.9
Zm00001eb430130 Zea mays HOM05D000213 ORTHO05D000426 2.1e-14 83.2 207 37.2
THA.LOC104814342 Tarenaya hassleriana HOM05D000213 ORTHO05D000426 2.8e-14 82.8 171 42.7
Glyma.08G078700 Glycine max HOM05D000213 ORTHO05D000426 3.6e-14 82.4 156 47.4
Gohir.A10G005800 Gossypium hirsutum HOM05D000213 ORTHO05D000426 3.6e-14 82.4 148 41.2
Gorai.011G006600 Gossypium raimondii HOM05D000213 ORTHO05D000426 3.6e-14 82.4 148 41.2
BcaC05g27089 Brassica carinata HOM05D000213 ORTHO05D000426 1.0e-13 80.9 155 43.9
BolC5t31701H Brassica oleracea HOM05D000213 ORTHO05D000426 1.0e-13 80.9 155 43.9
Zm00001eb188100 Zea mays HOM05D000213 ORTHO05D000426 1.0e-13 80.9 210 32.4
THA.LOC104798581 Tarenaya hassleriana HOM05D000213 ORTHO05D000426 2.3e-13 79.7 167 43.1
Migut.M01929 Erythranthe guttata HOM05D000213 ORTHO05D000426 3.0e-13 79.3 175 38.3
A09p35760 Brassica napus HOM05D000213 ORTHO05D000426 4.0e-13 79.0 155 40.0
C05p29720 Brassica napus HOM05D000213 ORTHO05D000426 4.0e-13 79.0 155 43.2
BraA09t39099Z Brassica rapa HOM05D000213 ORTHO05D000426 4.0e-13 79.0 155 40.0
AT2G34830 Arabidopsis thaliana HOM05D000213 ORTHO05D000426 6.8e-13 78.2 168 40.5
EL10Ac8g19648 Beta vulgaris HOM05D000213 ORTHO05D000426 8.9e-13 77.8 172 39.0
ECA236G4856 Erigeron canadensis HOM05D000213 ORTHO05D000426 8.9e-13 77.8 150 44.0
CsaV3_1G037680 Cucumis sativus L. HOM05D000213 ORTHO05D000426 1.2e-12 77.4 180 38.3
Migut.H01307 Erythranthe guttata HOM05D000213 ORTHO05D000426 2.0e-12 76.6 138 48.6
VMungo0251G2722 Vigna mungo HOM05D000213 ORTHO05D000426 2.0e-12 76.6 165 38.8
AL4G30850 Arabidopsis lyrata HOM05D000213 ORTHO05D000426 2.6e-12 76.3 170 41.2
Os04g0597300 Oryza sativa ssp. japonica HOM05D000213 ORTHO05D000426 1.7e-11 73.6 211 36.5
Carub.0004s1651 Capsella rubella HOM05D000213 ORTHO05D000426 2.9e-11 72.8 170 39.4
ClCG03G008580 Citrullus lanatus HOM05D000213 ORTHO05D000426 6.4e-11 71.6 168 36.9
TAR627G0494 Trochodendron aralioides HOM05D000213 ORTHO05D000426 6.4e-11 71.6 105 54.3
SEGI_19479 Sequoiadendron giganteum HOM05D000213 ORTHO05D000426 1.1e-10 70.9 175 33.7
BcaB07g32706 Brassica carinata HOM05D000213 ORTHO05D000426 5.4e-10 68.6 159 40.3
Aa31LG6G11890 Aethionema arabicum HOM05D000213 ORTHO05D000426 9.2e-10 67.8 124 38.7
CDE02G4123 Ceratophyllum demersum HOM05D000213 ORTHO05D000426 4.6e-09 65.5 82 51.2
AL8G14230 Arabidopsis lyrata HOM05D000005 ORTHO05D010626 5.9e-09 65.1 131 40.5
SalBow7G0325 Salvia bowleyana HOM05D000213 ORTHO05D000426 5.9e-09 65.1 120 41.7
CAN.G78.129 Capsicum annuum HOM05D000213 ORTHO05D000426 7.8e-09 64.7 128 35.2
Gohir.D10G005800 Gossypium hirsutum HOM05D000213 ORTHO05D000426 7.8e-09 64.7 29 100.0
Sed0012685 Sechium edule HOM05D000213 ORTHO05D000426 7.8e-09 64.7 172 33.1
Zm00001eb072020 Zea mays HOM05D000213 ORTHO05D000426 1.0e-08 64.3 211 33.6
AL8G14370 Arabidopsis lyrata HOM05D000005 ORTHO05D010626 3.9e-08 62.4 131 38.9
CDE12G0209 Ceratophyllum demersum HOM05D000213 ORTHO05D000426 3.9e-08 62.4 91 46.2
Os02g0698800 Oryza sativa ssp. japonica HOM05D000213 ORTHO05D000426 8.6e-08 61.2 31 90.3
MELO3C002875.2 Cucumis melo HOM05D000213 ORTHO05D000426 1.5e-07 60.5 182 35.7
MELO3C007048.2 Cucumis melo HOM05D000213 ORTHO05D000426 4.3e-07 58.9 27 96.3
CsaV3_6G052610 Cucumis sativus L. HOM05D000213 ORTHO05D000426 4.3e-07 58.9 27 96.3
Peaxi162Scf00585g00513 Petunia axillaris HOM05D000213 ORTHO05D000426 4.3e-07 58.9 152 32.2
AT5G45050 Arabidopsis thaliana HOM05D000005 ORTHO05D010626 5.6e-07 58.5 126 34.9
Nitab4.5_0000915g0120 Nicotiana tabacum HOM05D000213 ORTHO05D000426 5.6e-07 58.5 128 35.2
Sopen01g038890 Solanum pennellii HOM05D000213 ORTHO05D000426 7.3e-07 58.2 128 29.7
unitig_37.g12065 Utricularia gibba HOM05D000213 ORTHO05D000426 1.2e-06 57.4 166 30.1
Zm00001eb025220 Zea mays HOM05D000213 ORTHO05D000426 1.2e-06 57.4 30 83.3
Nitab4.5_0010695g0060 Nicotiana tabacum HOM05D000213 ORTHO05D000426 2.1e-06 56.6 128 34.4
Oeu063677.1 Olea europaea HOM05D000213 ORTHO05D000426 2.1e-06 56.6 114 35.1
HPP92_014704 Vanilla planifolia HOM05D000213 ORTHO05D000426 2.1e-06 56.6 152 36.8
arahy.Tifrunner.gnm1.ann1.GB36NI Arachis hypogaea HOM05D000213 ORTHO05D000426 3.6e-06 55.8 27 92.6
arahy.Tifrunner.gnm1.ann1.U9T3UU Arachis hypogaea HOM05D000213 ORTHO05D000426 3.6e-06 55.8 27 92.6
Sabra03G0095100 Salix brachista HOM05D000213 ORTHO05D000426 6.2e-06 55.1 118 33.9
PGSC0003DMG400000064 Solanum tuberosum HOM05D000213 ORTHO05D000426 6.2e-06 55.1 129 34.9
SEGI_18146 Sequoiadendron giganteum HOM05D000213 ORTHO05D000426 8.0e-06 54.7 171 30.4


User provided reference genes

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