Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014178 Camellia sinensis var. sinensis HOM05D003297 ORTHO05D108979 1.3e-88 329.7 169 100.0
CSS0032708 Camellia sinensis var. sinensis HOM05D003297 ORTHO05D004027 3.1e-21 105.9 163 49.1
CSS0020533 Camellia sinensis var. sinensis HOM05D003297 ORTHO05D004027 3.5e-09 65.9 59 62.7
CSS0005089 Camellia sinensis var. sinensis HOM05D003297 ORTHO05D004027 8.6e-08 61.2 48 68.8
CSS0009984 Camellia sinensis var. sinensis HOM05D003297 ORTHO05D004027 8.6e-08 61.2 48 68.8
CSS0027121 Camellia sinensis var. sinensis HOM05D003297 ORTHO05D004027 2.5e-07 59.7 48 66.7
Duzib264G0931 Durio zibethinus HOM05D003297 ORTHO05D004027 7.3e-07 58.2 59 52.5
THA.LOC104822413 Tarenaya hassleriana HOM05D003297 ORTHO05D004027 7.3e-07 58.2 59 57.6
Actinidia38211 Actinidia chinensis HOM05D003297 ORTHO05D004027 2.1e-06 56.6 48 60.4
vmacro05937 Vaccinium macrocarpon HOM05D003297 ORTHO05D004027 2.8e-06 56.2 60 53.3
FAN05G2878 Fragaria x ananassa HOM05D003297 ORTHO05D004027 3.6e-06 55.8 94 45.7
FAN05G2899 Fragaria x ananassa HOM05D003297 ORTHO05D004027 3.6e-06 55.8 94 45.7
Lj5A712T32 Lonicera japonica HOM05D003297 ORTHO05D004027 3.6e-06 55.8 138 34.1
CARHR103230 Cardamine hirsuta HOM05D003297 ORTHO05D004027 4.7e-06 55.5 59 54.2
Sp6g29790 Schrenkiella parvula HOM05D003297 ORTHO05D004027 4.7e-06 55.5 48 64.6
Manes.17G106000 Manihot esculenta HOM05D003297 ORTHO05D004027 6.2e-06 55.1 59 47.5
Rhsim10G0008800 Rhododendron simsii HOM05D003297 ORTHO05D004027 6.2e-06 55.1 59 52.5
Actinidia30893 Actinidia chinensis HOM05D003297 ORTHO05D004027 8.1e-06 54.7 47 59.6
Carub.0006s1244 Capsella rubella HOM05D003297 ORTHO05D004027 8.1e-06 54.7 34 76.5
Eucgr.J02308 Eucalyptus grandis HOM05D003297 ORTHO05D004027 8.1e-06 54.7 69 49.3
Gohir.D04G078900 Gossypium hirsutum HOM05D003297 ORTHO05D004027 8.1e-06 54.7 60 50.0
Gorai.012G088800 Gossypium raimondii HOM05D003297 ORTHO05D004027 8.1e-06 54.7 60 50.0
Rhsim06G0126200 Rhododendron simsii HOM05D003297 ORTHO05D004027 8.1e-06 54.7 59 50.8
Zm00001eb121870 Zea mays HOM05D003297 ORTHO05D004027 8.1e-06 54.7 85 40.0


User provided reference genes

Program Settings