Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 4.8e-285 983.8 492 100.0
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.5e-281 972.2 506 97.0
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 2.4e-228 795.4 508 79.1
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 7.6e-222 773.9 492 79.3
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 4.0e-215 751.5 508 73.2
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 9.3e-212 740.3 509 73.9
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 1.5e-209 733.0 507 72.6
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 5.3e-207 724.5 509 71.3
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 9.0e-207 723.8 508 71.7
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 1.3e-205 719.9 509 71.7
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 3.8e-205 718.4 507 71.0
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 4.2e-204 714.9 508 70.5
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 5.5e-204 714.5 507 70.8
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 7.1e-204 714.1 502 70.9
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 7.1e-204 714.1 512 70.1
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 9.3e-204 713.8 502 71.3
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.3e-202 709.9 514 71.0
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 1.3e-202 709.9 507 70.6
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 2.3e-202 709.1 508 69.9
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 3.0e-202 708.8 511 69.7
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 3.3e-201 705.3 509 68.0
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 7.4e-201 704.1 506 70.4
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 1.6e-200 703.0 509 70.3
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 3.1e-199 698.7 507 68.4
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 6.9e-199 697.6 511 67.9
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 9.0e-199 697.2 494 70.9
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.2e-198 696.8 507 67.9
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.0e-198 696.0 494 70.6
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 2.6e-198 695.7 494 70.6
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 7.7e-198 694.1 507 68.0
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 7.7e-198 694.1 515 67.6
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 3.8e-197 691.8 515 68.5
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 5.0e-197 691.4 541 67.5
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 5.0e-197 691.4 494 70.4
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 6.5e-197 691.0 513 68.0
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 7.2e-196 687.6 513 68.6
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 3.6e-195 685.3 512 66.2
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 5.1e-194 681.4 517 67.9
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 4.8e-192 674.9 508 66.9
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 4.8e-192 674.9 511 67.3
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 1.1e-191 673.7 505 68.7
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 1.8e-191 672.9 511 65.6
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 3.1e-191 672.2 514 66.9
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 6.9e-191 671.0 506 67.0
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 1.5e-190 669.8 511 65.2
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 3.4e-190 668.7 506 67.2
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 4.5e-190 668.3 506 67.0
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 1.3e-189 666.8 515 63.9
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 3.8e-189 665.2 449 74.6
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 5.0e-189 664.8 509 66.0
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 1.1e-188 663.7 509 66.0
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 1.9e-188 662.9 507 65.9
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 5.5e-188 661.4 509 66.2
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 7.2e-188 661.0 508 67.5
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 4.7e-187 658.3 511 63.0
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 5.1e-186 654.8 506 65.8
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 4.4e-185 651.7 518 64.1
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 3.7e-184 648.7 486 67.3
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 2.4e-183 646.0 509 63.9
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 7.7e-182 641.0 518 62.4
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 1.7e-181 639.8 507 64.3
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 3.8e-181 638.6 481 66.7
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 6.5e-181 637.9 507 64.1
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 1.9e-180 636.3 507 64.3
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 1.9e-180 636.3 459 69.1
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 5.5e-180 634.8 516 63.8
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 3.9e-178 628.6 456 68.9
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 1.3e-176 623.6 469 65.5
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 2.2e-176 622.9 507 62.7
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 1.2e-171 607.1 508 61.4
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 1.5e-169 600.1 479 65.6
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 4.4e-169 598.6 517 61.3
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 5.7e-169 598.2 412 71.8
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 1.3e-168 597.0 515 59.0
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 6.3e-168 594.7 488 63.1
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 2.0e-166 589.7 518 61.2
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 1.7e-165 586.6 513 59.6
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 6.5e-165 584.7 397 73.6
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 9.4e-164 580.9 505 59.6
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 1.5e-161 573.5 515 58.6
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 7.5e-161 571.2 383 74.9
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 1.3e-160 570.5 513 58.1
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 6.3e-160 568.2 510 57.5
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 1.1e-159 567.4 517 56.7
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 1.1e-159 567.4 509 56.6
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 3.1e-159 565.8 518 56.8
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 7.0e-159 564.7 517 56.5
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 7.0e-159 564.7 515 55.9
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 2.0e-158 563.1 517 56.1
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 1.9e-156 556.6 517 55.3
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 3.3e-156 555.8 497 56.7
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 2.1e-155 553.1 353 74.8
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 1.8e-154 550.1 517 54.4
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 2.0e-153 546.6 520 54.2
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 9.8e-153 544.3 521 53.7
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 2.8e-139 499.6 401 60.1
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 2.3e-138 496.5 400 59.5
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 4.3e-132 475.7 413 56.7
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 8.6e-125 451.4 296 78.0
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.1e-116 424.5 456 51.5
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 1.7e-112 410.6 256 77.7
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 4.0e-106 389.4 413 46.2
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.6e-102 377.5 355 58.9
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 1.1e-98 364.8 372 51.9
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 1.7e-88 330.9 408 42.2
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 7.4e-84 315.5 256 63.3
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 8.2e-75 285.4 250 62.8
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 2.2e-67 260.8 150 81.3
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 3.6e-62 243.4 408 34.8
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 1.7e-59 234.6 405 34.1
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 1.2e-52 211.8 129 76.7
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 2.6e-52 210.7 171 62.0
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 4.7e-38 163.3 228 43.0
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 8.0e-38 162.5 228 43.0
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 3.2e-34 150.6 125 61.6
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 4.1e-34 150.2 148 54.7
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 2.5e-31 141.0 107 63.6
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 4.7e-30 136.7 191 39.3
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 5.8e-20 103.2 143 42.0


User provided reference genes

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