Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 6.1e-100 367.5 184 100.0
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 3.2e-80 302.0 183 83.1
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 1.4e-75 286.6 178 78.1
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 1.4e-75 286.6 182 78.0
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 1.8e-75 286.2 186 77.4
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 1.2e-74 283.5 179 79.3
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 5.8e-74 281.2 183 76.0
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 4.1e-72 275.0 178 77.5
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 5.4e-72 274.6 185 75.7
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 3.5e-71 271.9 182 74.7
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 3.5e-71 271.9 184 73.4
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 7.8e-71 270.8 180 75.0
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.7e-70 269.6 184 72.8
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 2.3e-70 269.2 180 76.1
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 1.5e-69 266.5 187 74.3
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 1.9e-69 266.2 183 74.3
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 3.3e-69 265.4 181 73.5
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 1.6e-68 263.1 177 75.7
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 2.8e-68 262.3 180 72.8
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 4.7e-68 261.5 178 75.8
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 6.2e-68 261.2 178 74.7
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 8.1e-68 260.8 172 75.6
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 1.4e-67 260.0 178 71.3
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 1.8e-67 259.6 167 74.3
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 3.1e-67 258.8 182 72.5
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 3.1e-67 258.8 179 69.8
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 5.2e-67 258.1 188 67.0
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 5.2e-67 258.1 166 74.7
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 6.8e-67 257.7 190 69.5
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 8.9e-67 257.3 182 72.0
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 8.9e-67 257.3 186 71.0
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 1.2e-66 256.9 177 71.8
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 1.5e-66 256.5 184 69.0
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.5e-66 256.5 182 72.0
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 2.0e-66 256.1 186 70.4
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 2.6e-66 255.8 167 74.3
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 3.4e-66 255.4 186 70.4
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 4.4e-66 255.0 245 56.7
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 5.8e-66 254.6 179 70.9
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 7.6e-66 254.2 167 73.1
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 1.3e-65 253.4 160 76.9
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 1.3e-65 253.4 178 71.3
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 1.7e-65 253.1 186 70.4
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 2.2e-65 252.7 174 69.5
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 2.2e-65 252.7 178 71.9
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 2.2e-65 252.7 181 72.9
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 2.9e-65 252.3 179 69.8
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 6.4e-65 251.1 176 71.6
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 6.4e-65 251.1 185 68.1
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 2.4e-64 249.2 175 71.4
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 2.4e-64 249.2 167 71.9
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 3.2e-64 248.8 178 69.1
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 2.7e-63 245.7 183 70.5
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 7.8e-63 244.2 181 71.3
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 3.0e-62 242.3 172 69.2
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 3.9e-62 241.9 183 69.4
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 1.1e-61 240.4 172 70.3
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 2.5e-61 239.2 179 69.3
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 3.3e-61 238.8 154 73.4
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 5.6e-61 238.0 182 65.9
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 1.6e-60 236.5 161 72.7
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 8.1e-60 234.2 136 85.3
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 1.4e-59 233.4 185 62.7
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 3.1e-59 232.3 180 65.6
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 1.2e-58 230.3 180 63.3
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 1.2e-58 230.3 161 67.7
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 2.0e-58 229.6 181 67.4
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 2.6e-58 229.2 184 62.5
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 2.6e-58 229.2 179 68.7
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 3.4e-58 228.8 179 68.7
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 3.4e-58 228.8 176 67.6
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 4.4e-58 228.4 181 60.8
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 5.8e-58 228.0 172 65.1
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 3.8e-57 225.3 167 65.9
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 8.4e-57 224.2 181 60.8
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 4.2e-56 221.9 167 64.1
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 4.2e-56 221.9 167 64.1
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 5.4e-56 221.5 182 61.5
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 9.3e-56 220.7 167 63.5
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 9.3e-56 220.7 167 63.5
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 9.3e-56 220.7 182 61.0
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 1.2e-55 220.3 167 63.5
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 1.6e-55 219.9 157 72.6
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 4.6e-55 218.4 144 72.2
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 1.7e-54 216.5 167 62.9
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 5.1e-54 214.9 142 76.8
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 1.5e-53 213.4 167 62.3
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 1.3e-52 210.3 182 59.3
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 1.4e-51 206.8 137 72.3
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 7.6e-50 201.1 132 72.7
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 1.7e-49 199.9 164 61.0
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 2.2e-49 199.5 135 72.6
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 2.9e-41 172.6 192 51.6
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 2.9e-41 172.6 123 69.1
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 1.2e-39 167.2 167 50.3
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 7.9e-39 164.5 181 49.2
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 3.0e-38 162.5 167 53.3
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 3.9e-38 162.2 200 45.5
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.3e-36 157.1 176 51.7
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 1.8e-30 136.7 101 73.3
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 2.8e-28 129.4 80 72.5
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 9.0e-27 124.4 170 44.1
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 5.9e-26 121.7 128 50.8
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.3e-25 120.6 87 65.5
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 2.0e-21 106.7 171 41.5
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 1.7e-20 103.6 159 35.8
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 1.7e-20 103.6 74 68.9
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 4.8e-20 102.1 99 53.5
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 5.9e-18 95.1 139 40.3
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 1.1e-13 80.9 69 58.0
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 1.5e-08 63.9 40 77.5
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 1.8e-06 57.0 39 64.1
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 5.2e-06 55.5 56 50.0


User provided reference genes

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