Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014134 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 2.9e-91 338.6 177 100.0
Dinv16225 Davidia involucrata HOM05D006963 ORTHO05D008783 4.6e-44 181.8 177 61.0
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 1.3e-43 180.3 163 65.0
Dinv29380 Davidia involucrata HOM05D006963 ORTHO05D008783 1.7e-43 179.9 192 56.2
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 1.4e-40 170.2 168 66.1
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 7.9e-36 154.5 170 55.3
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 3.9e-35 152.1 117 64.1
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 1.1e-34 150.6 172 55.2
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 1.5e-34 150.2 175 55.4
Nn2g13854 Nelumbo nucifera HOM05D006963 ORTHO05D008783 1.5e-34 150.2 206 47.6
Nitab4.5_0003155g0020 Nicotiana tabacum HOM05D006963 ORTHO05D008783 2.5e-34 149.4 180 52.2
Nitab4.5_0001163g0050 Nicotiana tabacum HOM05D006963 ORTHO05D008783 7.3e-34 147.9 177 50.8
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 4.8e-33 145.2 118 63.6
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 1.2e-31 140.6 142 57.0
COL.COLO4_19194 Corchorus olitorius HOM05D006963 ORTHO05D008783 2.6e-31 139.4 161 51.6
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 2.6e-31 139.4 161 52.8
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 3.4e-31 139.0 161 51.6
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 5.8e-31 138.3 180 48.3
Oeu008361.1 Olea europaea HOM05D006963 ORTHO05D008783 7.6e-31 137.9 157 54.8
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 9.9e-31 137.5 185 49.7
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 2.2e-30 136.3 165 55.8
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 3.8e-30 135.6 160 51.2
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 4.9e-30 135.2 168 50.0
Sopen06g031250 Solanum pennellii HOM05D006963 ORTHO05D008783 4.9e-30 135.2 194 46.9
CAN.G1432.10 Capsicum annuum HOM05D006963 ORTHO05D008783 8.4e-30 134.4 172 47.1
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 8.4e-30 134.4 160 52.5
Peaxi162Scf00114g00812 Petunia axillaris HOM05D006963 ORTHO05D008783 8.4e-30 134.4 167 50.3
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 1.1e-29 134.0 124 57.3
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 1.1e-29 134.0 134 53.7
Gohir.D13G228600 Gossypium hirsutum HOM05D006963 ORTHO05D008783 1.4e-29 133.7 167 50.3
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 2.4e-29 132.9 168 49.4
Solyc06g074810.3 Solanum lycopersicum HOM05D006963 ORTHO05D008783 2.4e-29 132.9 194 46.4
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 4.2e-29 132.1 171 51.5
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 5.4e-29 131.7 171 53.2
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 5.4e-29 131.7 177 48.6
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 5.4e-29 131.7 114 57.0
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 9.3e-29 131.0 171 51.5
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 1.2e-28 130.6 125 56.8
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 1.2e-28 130.6 167 49.7
Glyma.12G178700 Glycine max HOM05D006963 ORTHO05D008783 2.1e-28 129.8 114 56.1
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 2.7e-28 129.4 158 47.5
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 2.7e-28 129.4 114 56.1
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 3.5e-28 129.0 115 53.0
PGSC0003DMG400007133 Solanum tuberosum HOM05D006963 ORTHO05D008783 3.5e-28 129.0 183 48.1
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 1.0e-27 127.5 181 45.9
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 3.9e-27 125.6 166 50.0
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 1.9e-26 123.2 162 48.1
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 5.6e-26 121.7 186 45.2
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 7.4e-26 121.3 183 43.7
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 1.3e-25 120.6 158 44.3
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 2.8e-25 119.4 179 44.7
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 3.7e-25 119.0 169 44.4
SGA_v2.0_scaffold27G11571 Striga asiatica HOM05D006963 ORTHO05D008783 1.1e-24 117.5 156 42.9
TWI79G0699 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 2.4e-24 116.3 177 46.9
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 3.1e-24 115.9 112 52.7
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 4.0e-24 115.5 170 48.8
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 4.0e-24 115.5 177 46.9
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 6.9e-24 114.8 166 45.2
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 9.0e-24 114.4 176 45.5
Sabra09G0002400 Salix brachista HOM05D006963 ORTHO05D008783 9.0e-24 114.4 160 45.0
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 1.0e-22 110.9 161 50.3
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 1.7e-22 110.2 174 44.8
Migut.D02292 Erythranthe guttata HOM05D006963 ORTHO05D008783 1.7e-22 110.2 156 40.4
Potri.009G005300 Populus trichocarpa HOM05D006963 ORTHO05D008783 1.7e-22 110.2 162 46.9
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 2.9e-22 109.4 174 44.8
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 2.9e-22 109.4 171 45.6
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 2.9e-22 109.4 160 49.4
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 4.9e-22 108.6 125 48.8
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 1.1e-21 107.5 160 48.8
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 2.5e-21 106.3 168 41.1
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 2.5e-21 106.3 166 50.0
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 7.1e-21 104.8 123 47.2
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 1.2e-20 104.0 172 40.7
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 1.6e-20 103.6 120 50.0
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 2.1e-20 103.2 170 46.5
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 2.7e-20 102.8 163 47.9
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 1.0e-19 100.9 165 43.0
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 1.3e-19 100.5 173 42.8
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 1.5e-18 97.1 170 41.8
unitig_899.g15359 Utricularia gibba HOM05D006963 ORTHO05D008783 1.9e-18 96.7 124 39.5
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 1.6e-17 93.6 133 44.4
Sabra04G0147300 Salix brachista HOM05D006963 ORTHO05D008783 2.8e-17 92.8 160 43.8
ATR0329G003 Amborella trichopoda HOM05D006963 ORTHO05D008783 8.2e-17 91.3 182 36.8
CDE04G1589 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 3.1e-16 89.4 117 43.6
SEGI_09379 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 1.0e-11 74.3 200 31.5


User provided reference genes

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