Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 8.6e-114 413.7 213 100.0
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 1.0e-85 320.5 213 79.3
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 2.2e-77 292.7 183 82.0
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.9e-76 289.7 208 72.6
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 1.0e-74 283.9 205 72.2
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 4.3e-73 278.5 208 71.2
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 7.4e-73 277.7 201 71.1
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 2.2e-72 276.2 205 70.7
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 1.1e-71 273.9 213 68.1
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 2.0e-70 269.6 207 68.1
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 3.4e-70 268.9 199 71.4
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 1.1e-68 263.8 212 66.5
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 9.4e-68 260.8 184 74.5
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 7.9e-67 257.7 201 67.7
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 5.1e-66 255.0 212 65.6
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 8.8e-66 254.2 214 65.0
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 8.8e-66 254.2 213 65.3
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 2.0e-65 253.1 209 66.0
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 7.4e-65 251.1 191 71.7
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 4.8e-64 248.4 217 65.9
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 6.3e-64 248.1 179 70.4
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.4e-63 246.9 214 64.0
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 1.4e-63 246.9 215 66.5
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 1.8e-63 246.5 210 63.8
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 3.1e-63 245.7 239 59.0
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 1.2e-62 243.8 173 73.4
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 2.0e-62 243.0 214 63.6
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 3.4e-62 242.3 201 67.7
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 3.4e-62 242.3 216 64.4
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 5.9e-62 241.5 204 65.7
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 1.0e-61 240.7 204 63.7
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 1.3e-61 240.4 201 67.2
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 8.5e-61 237.7 178 72.5
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 1.4e-60 236.9 196 67.3
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 5.5e-60 235.0 213 62.4
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 9.4e-60 234.2 205 63.9
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 9.4e-60 234.2 184 69.0
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 1.6e-59 233.4 204 62.7
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 2.1e-59 233.0 205 63.4
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 4.7e-59 231.9 212 60.8
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 4.7e-59 231.9 198 63.6
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 7.9e-59 231.1 202 64.9
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 7.9e-59 231.1 205 63.4
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 1.8e-58 229.9 212 59.9
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 3.0e-58 229.2 190 65.3
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 3.0e-58 229.2 198 63.1
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 5.1e-58 228.4 214 60.3
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 1.5e-57 226.9 187 65.2
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 1.5e-57 226.9 182 69.2
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 4.4e-57 225.3 188 66.5
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 5.7e-57 224.9 184 65.8
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 7.4e-57 224.6 204 62.3
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 7.4e-57 224.6 204 62.3
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 2.2e-56 223.0 184 64.7
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 2.8e-56 222.6 214 61.2
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 3.7e-56 222.2 212 57.5
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 3.7e-56 222.2 202 63.4
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 6.3e-56 221.5 214 61.7
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 6.3e-56 221.5 214 61.7
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 8.2e-56 221.1 214 61.2
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 8.2e-56 221.1 184 65.8
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 1.1e-55 220.7 198 62.6
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.1e-55 220.7 151 74.8
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 5.3e-55 218.4 206 60.2
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 5.3e-55 218.4 214 60.7
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 5.3e-55 218.4 199 62.3
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 5.3e-55 218.4 190 60.5
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 1.2e-54 217.2 218 61.5
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 4.5e-54 215.3 205 58.5
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 4.5e-54 215.3 213 57.3
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 1.0e-53 214.2 196 59.2
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 3.2e-52 209.1 181 61.9
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 7.2e-52 208.0 200 61.5
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 9.4e-52 207.6 199 55.8
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 9.4e-52 207.6 185 60.5
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 1.2e-51 207.2 210 56.2
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 2.7e-51 206.1 188 61.7
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 4.7e-51 205.3 203 60.1
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 8.0e-51 204.5 176 61.9
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 1.0e-50 204.1 175 62.3
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 1.0e-50 204.1 200 59.5
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 1.4e-50 203.8 131 78.6
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 1.8e-50 203.4 167 67.7
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 2.3e-50 203.0 167 67.7
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 4.0e-50 202.2 213 57.7
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 1.1e-49 200.7 131 77.9
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 2.0e-49 199.9 198 59.6
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 2.0e-49 199.9 145 72.4
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 3.3e-49 199.1 210 57.1
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 7.5e-49 198.0 170 64.7
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.7e-48 196.8 158 67.7
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 2.8e-48 196.1 172 61.6
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 8.2e-48 194.5 168 66.1
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 4.1e-47 192.2 133 72.2
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 7.0e-47 191.4 133 73.7
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 7.7e-46 188.0 187 55.1
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 5.0e-45 185.3 211 53.1
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 2.7e-43 179.5 182 54.4
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 1.4e-42 177.2 126 74.6
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 2.5e-36 156.4 178 50.6
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 3.6e-35 152.5 137 62.8
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 2.3e-34 149.8 101 73.3
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 8.8e-34 147.9 207 44.9
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 4.1e-31 139.0 124 55.6
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 6.1e-27 125.2 129 48.1
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 2.3e-26 123.2 152 46.1
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 8.3e-24 114.8 121 56.2
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 9.2e-23 111.3 70 80.0
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 8.9e-18 94.7 165 37.6
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 3.5e-06 56.2 102 31.4
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 4.6e-06 55.8 98 28.6
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 6.0e-06 55.5 98 29.6


User provided reference genes

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