Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 3.8e-207 724.9 456 100.0
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 1.1e-163 580.5 345 84.6
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 2.2e-154 549.7 316 86.7
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 2.4e-153 546.2 380 77.1
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 2.3e-148 529.6 316 83.9
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 2.8e-146 522.7 315 81.6
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 3.7e-146 522.3 351 75.5
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 1.4e-145 520.4 321 81.0
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 7.0e-145 518.1 325 78.8
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 2.0e-144 516.5 330 79.7
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 1.0e-143 514.2 375 71.2
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 8.0e-141 504.6 308 81.2
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 8.0e-141 504.6 385 74.8
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 1.8e-140 503.4 317 80.4
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 5.2e-140 501.9 311 79.4
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 5.2e-140 501.9 314 79.6
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 8.8e-140 501.1 315 79.4
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 5.7e-139 498.4 321 79.1
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 1.3e-138 497.3 348 73.3
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 1.3e-138 497.3 337 75.1
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 3.7e-138 495.7 387 69.5
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 6.3e-138 495.0 337 75.1
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 1.8e-137 493.4 320 78.4
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 7.0e-137 491.5 315 78.4
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 9.1e-137 491.1 385 69.1
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.6e-136 490.3 383 70.5
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 2.7e-136 489.6 317 77.3
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 2.7e-136 489.6 341 74.5
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 4.5e-136 488.8 347 73.2
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 1.0e-135 487.6 314 79.3
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 2.2e-135 486.5 388 67.8
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 8.5e-135 484.6 351 72.9
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 2.5e-134 483.0 336 75.0
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 5.5e-134 481.9 313 78.6
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 2.1e-133 479.9 367 69.5
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 2.7e-133 479.6 338 72.5
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 2.7e-133 479.6 338 72.5
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 2.7e-133 479.6 342 73.1
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 3.6e-133 479.2 342 73.4
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 4.7e-133 478.8 315 76.2
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 1.0e-132 477.6 344 72.1
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 1.4e-132 477.2 335 73.1
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 1.8e-132 476.9 385 69.4
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 2.3e-132 476.5 335 74.3
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 4.0e-132 475.7 313 77.0
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 2.0e-131 473.4 316 75.3
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 4.4e-131 472.2 313 77.6
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 1.7e-130 470.3 347 70.0
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 1.7e-130 470.3 318 73.6
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 2.8e-130 469.5 316 74.7
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 3.7e-130 469.2 318 74.8
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 4.8e-130 468.8 314 75.5
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 4.8e-130 468.8 313 75.1
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 6.3e-130 468.4 335 72.5
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 6.3e-130 468.4 317 74.1
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 8.3e-130 468.0 350 69.4
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 1.4e-129 467.2 351 68.9
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 2.4e-129 466.5 319 74.3
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 3.1e-129 466.1 317 75.1
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 7.0e-129 464.9 319 74.9
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 1.2e-128 464.2 317 73.5
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 1.2e-128 464.2 317 73.5
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 1.2e-128 464.2 326 73.0
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 1.6e-128 463.8 317 73.5
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 2.7e-128 463.0 317 74.8
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 2.7e-128 463.0 317 73.5
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 7.7e-128 461.5 319 74.0
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 6.5e-127 458.4 349 70.2
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 3.3e-126 456.1 311 75.2
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 4.2e-126 455.7 350 69.4
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 5.5e-126 455.3 313 74.1
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 1.2e-125 454.1 404 61.1
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 2.8e-125 453.0 350 69.4
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 2.8e-125 453.0 323 71.2
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 4.7e-125 452.2 316 73.1
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 8.0e-125 451.4 328 70.7
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 3.0e-124 449.5 340 68.2
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 4.0e-124 449.1 354 67.8
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 4.4e-123 445.7 346 70.2
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 2.8e-122 443.0 394 64.2
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 5.9e-120 435.3 318 70.4
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 1.0e-119 434.5 311 68.8
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 2.9e-119 433.0 317 69.7
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 2.9e-119 433.0 317 69.7
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 9.5e-118 427.9 390 61.3
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 5.8e-115 418.7 323 69.3
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 5.0e-111 405.6 619 43.0
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 3.7e-106 389.4 260 77.3
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 9.2e-105 384.8 265 73.2
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 3.3e-102 376.3 353 58.1
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 5.6e-102 375.6 304 64.1
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 5.2e-100 369.0 279 67.7
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 4.1e-97 359.4 309 59.9
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 1.3e-95 354.4 252 73.0
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 2.7e-88 330.1 222 74.3
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 7.3e-86 322.0 258 65.9
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 2.8e-85 320.1 289 58.1
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 3.2e-73 280.0 192 75.0
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 1.0e-71 275.0 311 52.1
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 1.1e-65 255.0 187 70.1
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 7.6e-59 232.3 168 70.8
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 2.4e-52 210.7 156 67.9
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 2.5e-46 190.7 179 58.7
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 1.2e-40 171.8 333 35.1
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 5.7e-30 136.3 193 49.2
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 5.3e-28 129.8 69 85.5
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 1.6e-27 128.3 97 71.1
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 1.7e-26 124.8 94 70.2
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 5.0e-26 123.2 93 71.0
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 7.2e-25 119.4 88 69.3
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 5.7e-22 109.8 89 65.2
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 3.1e-20 104.0 62 83.9
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.6e-19 101.7 62 82.3
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 1.6e-19 101.7 118 54.2
CSS0048517 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.2e-18 97.8 96 77.1
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 6.5e-18 96.3 80 65.0
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.1e-17 95.5 63 81.0
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 2.5e-17 94.4 48 89.6
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 2.5e-17 94.4 48 89.6
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 4.8e-13 80.1 45 77.8
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 4.8e-13 80.1 67 64.2
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 8.3e-13 79.3 42 88.1
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 3.1e-12 77.4 121 36.4


User provided reference genes

Program Settings