Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013987 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.2e-106 389.8 193 100.0
CSS0031317 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.7e-106 388.7 193 99.5
CSS0003796 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 3.5e-98 361.7 193 94.8
CSS0041914 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 4.6e-98 361.3 197 92.9
CSS0045873 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.1e-96 356.7 194 94.3
CSS0045886 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.1e-96 356.7 194 94.3
CSS0023116 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 3.3e-96 355.1 194 94.3
CSS0041545 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 5.9e-61 238.0 174 73.6
CSS0042684 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 9.4e-59 230.7 174 72.4
Actinidia37211 Actinidia chinensis HOM05D007849 ORTHO05D009964 5.5e-51 204.9 132 75.8
Rhsim13G0083900 Rhododendron simsii HOM05D007849 ORTHO05D009964 3.0e-49 199.1 135 71.9
vmacro03084 Vaccinium macrocarpon HOM05D007849 ORTHO05D009964 2.4e-46 189.5 140 68.6
Dinv01583 Davidia involucrata HOM05D007849 ORTHO05D009964 2.0e-40 169.9 132 65.2
Dinv16985 Davidia involucrata HOM05D007849 ORTHO05D009964 2.0e-40 169.9 132 65.2
Dinv42934 Davidia involucrata HOM05D007849 ORTHO05D009964 2.0e-40 169.9 132 65.2
Dinv43166 Davidia involucrata HOM05D007849 ORTHO05D009964 2.0e-40 169.9 132 65.2
Oeu019202.2 Olea europaea HOM05D007849 ORTHO05D009964 1.1e-35 154.1 131 55.7
QL01p032362 Quercus lobata HOM05D007849 ORTHO05D009964 1.4e-33 147.1 127 57.5
TAR636G2131 Trochodendron aralioides HOM05D007849 ORTHO05D009964 1.4e-33 147.1 120 57.5
Lj2C1060G4 Lonicera japonica HOM05D007849 ORTHO05D009964 6.8e-33 144.8 125 58.4
SalBow2G0065 Salvia bowleyana HOM05D007849 ORTHO05D009964 2.6e-32 142.9 136 50.0
GSVIVG01024984001 Vitis vinifera HOM05D007849 ORTHO05D009964 7.5e-32 141.4 121 58.7
Cfa011488 Carpinus fangiana HOM05D007849 ORTHO05D009964 9.8e-32 141.0 125 54.4
Migut.N02673 Erythranthe guttata HOM05D007849 ORTHO05D009964 2.2e-31 139.8 125 51.2
Hma1.2p1_1888F.1_g306580 Hydrangea macrophylla HOM05D007849 ORTHO05D009964 1.1e-30 137.5 125 55.2
PSO339G6571 Papaver somniferum HOM05D007849 ORTHO05D009964 2.4e-30 136.3 130 50.0
Potri.009G029800 Populus trichocarpa HOM05D007849 ORTHO05D009964 2.4e-30 136.3 121 52.9
MBI14_g31252_MAGBIO Magnolia biondii HOM05D007849 ORTHO05D009964 3.2e-30 136.0 129 52.7
Duzib168G1667 Durio zibethinus HOM05D007849 ORTHO05D009964 5.4e-30 135.2 125 51.2
SGA_v2.0_scaffold104G30123 Striga asiatica HOM05D007849 ORTHO05D009964 9.2e-30 134.4 133 48.1
Manes.04G034000 Manihot esculenta HOM05D007849 ORTHO05D009964 2.0e-29 133.3 121 54.5
Sabra09G0020700 Salix brachista HOM05D007849 ORTHO05D009964 2.7e-29 132.9 121 52.1
RcHm_v2.0_Chr5g0064071 Rosa chinensis HOM05D007849 ORTHO05D009964 4.6e-29 132.1 131 53.4
Haze_24080 Corylus avellana HOM05D007849 ORTHO05D009964 1.0e-28 131.0 157 43.9
MD03G1096200 Malus domestica HOM05D007849 ORTHO05D009964 1.3e-28 130.6 128 49.2
Nn2g10385 Nelumbo nucifera HOM05D007849 ORTHO05D009964 1.3e-28 130.6 142 45.1
Gohir.D03G126500 Gossypium hirsutum HOM05D007849 ORTHO05D009964 2.3e-28 129.8 125 49.6
DCAR_018903 Daucus carota HOM05D007849 ORTHO05D009964 3.9e-28 129.0 140 46.4
Gohir.A03G041600 Gossypium hirsutum HOM05D007849 ORTHO05D009964 6.6e-28 128.3 125 48.0
Ciclev10029013m.g Citrus clementina HOM05D007849 ORTHO05D009964 1.1e-27 127.5 125 49.6
COL.COLO4_18494 Corchorus olitorius HOM05D007849 ORTHO05D009964 1.5e-27 127.1 130 47.7
Thecc.09G323300 Theobroma cacao HOM05D007849 ORTHO05D009964 7.3e-27 124.8 125 48.8
FvH4_3g35813 Fragaria vesca HOM05D007849 ORTHO05D009964 1.6e-26 123.6 131 48.9
CsaV3_6G016950 Cucumis sativus L. HOM05D007849 ORTHO05D009964 4.7e-26 122.1 124 44.4
unitig_0.g229 Utricularia gibba HOM05D007849 ORTHO05D009964 8.0e-26 121.3 123 48.0
Eucgr.B02377 Eucalyptus grandis HOM05D007849 ORTHO05D009964 2.3e-25 119.8 122 49.2
TWI79G0095 Tripterygium wilfordii HOM05D007849 ORTHO05D009964 3.1e-25 119.4 125 44.0
Gorai.003G133000 Gossypium raimondii HOM05D007849 ORTHO05D009964 5.2e-25 118.6 140 43.6
PGR102G2625 Punica granatum HOM05D007849 ORTHO05D009964 6.8e-25 118.2 125 48.8
Aqoxy6G02063 Aquilegia oxysepala HOM05D007849 ORTHO05D009964 1.5e-24 117.1 131 43.5
Lsat_1_v5_gn_4_92200 Lactuca sativa HOM05D007849 ORTHO05D009964 3.4e-24 115.9 125 48.8
Atru.chr2.2286 Acer truncatum HOM05D007849 ORTHO05D009964 4.4e-24 115.5 125 44.0
Atru.chr3.3864 Acer truncatum HOM05D007849 ORTHO05D009964 4.4e-24 115.5 125 44.0
ECA236G2501 Erigeron canadensis HOM05D007849 ORTHO05D009964 4.4e-24 115.5 131 48.9
FAN11G2231 Fragaria x ananassa HOM05D007849 ORTHO05D009964 4.4e-24 115.5 175 42.3
Hund18918 Selenicereus undatus HOM05D007849 ORTHO05D009964 4.4e-24 115.5 129 48.1
FAN21G0522 Fragaria x ananassa HOM05D007849 ORTHO05D009964 5.8e-24 115.2 102 54.9
ClCG02G020250 Citrullus lanatus HOM05D007849 ORTHO05D009964 2.9e-23 112.8 134 43.3
Os03g0275400 Oryza sativa ssp. japonica HOM05D007849 ORTHO05D009964 7.0e-22 108.2 124 46.8
Sed0012750 Sechium edule HOM05D007849 ORTHO05D009964 1.2e-21 107.5 135 38.5
EL10Ac7g16001 Beta vulgaris HOM05D007849 ORTHO05D009964 3.5e-21 105.9 131 45.0
AUR62001805 Chenopodium quinoa HOM05D007849 ORTHO05D009964 6.0e-21 105.1 141 46.8
ATR0559G278 Amborella trichopoda HOM05D007849 ORTHO05D009964 1.0e-20 104.4 129 38.8
AUR62009591 Chenopodium quinoa HOM05D007849 ORTHO05D009964 5.0e-20 102.1 131 44.3
Zm00001eb012380 Zea mays HOM05D007849 ORTHO05D009964 8.6e-20 101.3 124 45.2
Ah.08g219350 Amaranthus hybridus HOM05D007849 ORTHO05D009964 2.5e-19 99.8 107 46.7
SEGI_09096 Sequoiadendron giganteum HOM05D007849 ORTHO05D009964 1.4e-17 94.0 132 40.2
HanXRQChr05g0134521 Helianthus annuus HOM05D007849 ORTHO05D009964 8.9e-17 91.3 55 65.5
Prupe.6G079200 Prunus persica HOM05D007849 ORTHO05D009964 6.4e-15 85.1 75 54.7
HPP92_021135 Vanilla planifolia HOM05D007849 ORTHO05D009964 4.1e-14 82.4 125 40.0
Zm00001eb397660 Zea mays HOM05D007849 ORTHO05D009964 5.4e-14 82.0 54 61.1
Sed0025903 Sechium edule HOM05D007849 ORTHO05D009964 2.1e-13 80.1 50 64.0
Pp3c18_13380 Physcomitrium patens HOM05D007849 ORTHO05D009964 6.0e-13 78.6 99 40.4
MELO3C025926.2 Cucumis melo HOM05D007849 ORTHO05D009964 1.3e-12 77.4 98 37.8
MSTRG.12647 Avicennia marina HOM05D007849 ORTHO05D009964 2.1e-10 70.1 41 68.3
Mapoly0108s0012 Marchantia polymorpha HOM05D007849 ORTHO05D009964 3.4e-08 62.8 50 44.0
CBR_g22259 Chara braunii HOM05D007849 ORTHO05D009964 4.9e-07 58.9 55 47.3
Gohir.D13G207600 Gossypium hirsutum HOM05D002026 ORTHO05D002291 1.4e-06 57.4 88 34.1
Cpa.g.sc81.165 Carica papaya HOM05D007849 ORTHO05D009964 2.4e-06 56.6 125 29.6
Gohir.A13G201800 Gossypium hirsutum HOM05D002026 ORTHO05D002291 3.2e-06 56.2 89 34.8
Zm00001eb433550 Zea mays HOM05D005588 ORTHO05D006615 4.1e-06 55.8 49 46.9
Gorai.013G236500 Gossypium raimondii HOM05D002026 ORTHO05D002291 5.4e-06 55.5 89 34.8
MSTRG.16651 Avicennia marina HOM05D002026 ORTHO05D002291 7.1e-06 55.1 103 29.1
Zm00001eb066460 Zea mays HOM05D005588 ORTHO05D006615 7.1e-06 55.1 44 47.7


User provided reference genes

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