Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013976 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.1e-176 623.2 328 100.0
CSS0036030 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 8.0e-159 563.9 328 93.0
CSS0031773 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.7e-97 360.1 353 62.9
CSS0031756 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 2.3e-97 359.8 337 63.8
CSS0000154 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.6e-71 273.9 372 50.8
CSS0039876 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 8.8e-41 171.8 180 57.8
CSS0047522 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 3.5e-37 159.8 177 55.9
CSS0024493 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 2.1e-34 150.6 185 51.9
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-34 149.8 196 50.0
CSS0037636 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 4.1e-30 136.3 291 36.1
CSS0050237 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 4.4e-24 116.3 138 53.6
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 8.0e-10 68.9 177 36.7
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 8.0e-10 68.9 177 36.7
CSS0005907 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.3e-09 67.4 218 33.5
CSS0006070 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-09 67.0 219 32.4
CSS0038420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.8e-09 65.9 145 37.9
Thecc.08G074900 Theobroma cacao HOM05D011157 ORTHO05D013820 1.9e-06 57.8 131 35.9
CSS0045239 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.4e-06 57.4 166 34.3
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-06 57.4 121 33.1
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.0e-06 55.8 152 29.6


User provided reference genes

Program Settings