Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 8.3e-210 733.4 359 100.0
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.1e-164 582.0 326 87.1
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 1.7e-162 576.2 326 85.0
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.0e-159 565.5 326 85.9
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 7.4e-158 560.8 326 83.7
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 2.0e-155 552.7 328 83.5
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 4.6e-152 541.6 326 79.4
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 6.0e-152 541.2 326 79.8
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.3e-151 539.3 325 81.2
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.5e-150 536.6 318 82.1
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.5e-150 536.6 317 83.0
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 2.5e-150 535.8 326 79.8
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 3.3e-150 535.4 324 78.7
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.2e-149 532.7 329 80.5
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 8.2e-149 530.8 326 77.3
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 2.4e-148 529.3 326 78.2
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 3.1e-148 528.9 326 77.3
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 4.1e-148 528.5 326 77.0
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 4.1e-148 528.5 326 77.0
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 5.3e-148 528.1 326 77.0
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 9.0e-148 527.3 325 78.2
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 2.0e-147 526.2 326 77.3
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 1.3e-146 523.5 326 76.7
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.1e-145 520.4 326 77.6
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 3.2e-145 518.8 326 77.9
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 1.6e-144 516.5 327 75.5
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 1.1e-142 510.4 324 75.9
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 1.1e-142 510.4 326 75.5
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 5.7e-142 508.1 326 74.8
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 2.8e-141 505.8 321 74.8
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 3.7e-141 505.4 321 74.8
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 3.7e-141 505.4 326 74.5
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 6.3e-141 504.6 326 73.3
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 1.1e-140 503.8 326 73.9
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 5.3e-140 501.5 326 74.8
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 9.1e-140 500.7 326 72.7
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 1.2e-139 500.4 324 75.6
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 1.5e-139 500.0 326 73.6
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 5.9e-139 498.0 325 73.5
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 5.9e-139 498.0 326 74.2
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 1.3e-138 496.9 321 74.5
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 2.9e-138 495.7 326 74.5
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 2.9e-138 495.7 326 73.0
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.9e-138 495.7 326 75.2
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 5.0e-138 495.0 327 71.9
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.5e-137 492.7 307 76.5
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 2.5e-137 492.7 326 71.8
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 3.2e-137 492.3 326 74.2
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 3.2e-137 492.3 318 73.3
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 7.2e-137 491.1 326 72.7
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 9.4e-137 490.7 324 74.7
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 1.2e-136 490.3 325 72.3
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 4.7e-136 488.4 322 72.7
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.1e-136 488.0 326 74.2
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 7.9e-136 487.6 326 71.5
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 1.4e-135 486.9 318 73.0
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 1.4e-135 486.9 327 71.9
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 3.0e-135 485.7 317 74.1
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 2.0e-134 483.0 318 72.3
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 5.7e-134 481.5 323 71.8
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 2.2e-133 479.6 313 74.1
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 3.5e-131 472.2 327 72.2
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 7.7e-131 471.1 324 71.6
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 3.2e-129 465.7 328 69.8
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 8.0e-128 461.1 327 69.1
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 3.9e-127 458.8 359 65.7
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 2.0e-126 456.4 334 68.3
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 2.6e-126 456.1 317 70.0
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 2.6e-126 456.1 317 70.0
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 2.6e-126 456.1 317 70.0
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 3.3e-126 455.7 340 67.4
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 3.3e-126 455.7 326 69.3
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 1.7e-125 453.4 317 70.0
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 1.7e-125 453.4 317 70.0
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 3.7e-125 452.2 328 67.7
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 3.7e-125 452.2 331 67.4
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 3.7e-125 452.2 341 66.6
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 6.3e-125 451.4 324 71.6
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 2.4e-124 449.5 333 67.6
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 2.4e-124 449.5 329 67.2
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 2.6e-123 446.0 325 65.8
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 3.2e-121 439.1 316 68.0
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 7.2e-121 438.0 327 64.8
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 1.0e-119 434.1 312 67.3
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.2e-118 430.6 313 69.6
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.0e-118 429.9 327 64.8
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 2.2e-117 426.4 314 66.6
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 2.0e-115 419.9 311 64.6
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 5.0e-114 415.2 327 64.5
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 1.4e-103 380.6 299 63.2
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 4.9e-101 372.1 291 63.2
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 2.9e-98 362.8 316 59.5
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 8.6e-98 361.3 304 58.2
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.7e-90 337.0 198 80.3
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 5.2e-87 325.5 198 78.3
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 5.8e-86 322.0 305 54.8
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 1.3e-85 320.9 329 51.4
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.4e-84 316.6 304 54.3
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 1.6e-80 303.9 215 70.2
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 4.7e-80 302.4 152 96.1
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 8.1e-80 301.6 256 60.5
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 7.8e-67 258.5 201 63.2
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 7.8e-67 258.5 171 69.0
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.3e-61 241.1 158 70.3
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 6.4e-61 238.8 124 88.7
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.7e-59 233.4 153 76.5
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 7.3e-57 225.3 256 52.3
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.1e-55 221.5 284 46.8
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.1e-48 197.2 144 72.2
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.8e-47 194.1 130 72.3
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 6.5e-45 185.7 157 59.9
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.1e-39 166.8 126 70.6
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 5.8e-38 162.5 81 87.7
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.5e-30 136.3 135 52.6
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 9.1e-23 112.1 72 75.0
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 7.9e-19 99.0 216 33.8
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 7.2e-12 75.9 117 38.5
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 9.4e-12 75.5 65 60.0
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 1.8e-07 61.2 149 30.9
Cre16.g677600 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 3.1e-07 60.5 214 26.6
Cre16.g655900 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 5.3e-07 59.7 213 30.0


User provided reference genes

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