Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 5.5e-144 514.2 251 100.0
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 5.0e-121 438.0 248 87.1
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 2.3e-113 412.5 248 81.9
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 2.6e-109 399.1 248 78.2
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 6.0e-106 387.9 253 75.1
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 1.1e-104 383.6 239 76.6
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 3.3e-104 382.1 253 74.3
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 9.6e-104 380.6 242 75.2
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 8.1e-103 377.5 235 75.7
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 5.8e-101 371.3 249 71.9
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 9.9e-101 370.5 254 72.8
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 1.3e-100 370.2 249 72.3
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 3.8e-100 368.6 240 73.3
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 1.4e-99 366.7 246 70.7
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 5.4e-99 364.8 222 79.7
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 9.3e-99 364.0 250 71.6
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 9.3e-99 364.0 249 70.3
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 1.6e-98 363.2 239 71.1
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 2.7e-98 362.5 248 70.2
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 3.5e-98 362.1 248 71.4
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 8.7e-97 357.5 237 70.5
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 1.5e-96 356.7 248 70.6
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 1.9e-96 356.3 255 67.8
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 1.9e-96 356.3 235 69.4
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 2.5e-96 355.9 256 71.1
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 4.3e-96 355.1 249 69.5
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 7.3e-96 354.4 237 70.0
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 7.3e-96 354.4 253 70.0
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.6e-95 353.2 237 69.6
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 4.8e-95 351.7 251 66.1
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 1.4e-94 350.1 237 70.0
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 6.9e-94 347.8 234 72.2
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 6.9e-94 347.8 246 69.5
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 1.5e-93 346.7 238 71.0
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 9.9e-93 344.0 229 74.2
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 1.1e-91 340.5 247 66.0
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 7.1e-91 337.8 243 66.3
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 1.0e-89 334.0 232 69.4
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 1.7e-89 333.2 236 67.4
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 1.7e-89 333.2 248 67.7
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 2.3e-89 332.8 233 68.2
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 3.0e-89 332.4 232 70.7
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 8.7e-89 330.9 240 66.7
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 1.5e-88 330.1 248 64.9
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 1.5e-88 330.1 225 69.3
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 5.6e-88 328.2 219 72.6
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 5.6e-88 328.2 224 70.5
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 2.1e-87 326.2 252 64.3
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 2.8e-87 325.9 227 66.1
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 2.8e-87 325.9 227 66.1
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 4.8e-87 325.1 248 64.5
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 1.4e-86 323.6 223 69.1
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 1.8e-86 323.2 224 69.2
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 2.4e-86 322.8 234 66.2
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 3.1e-86 322.4 235 65.5
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 3.1e-86 322.4 248 63.7
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 9.0e-86 320.9 234 65.8
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 9.0e-86 320.9 224 68.8
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 1.5e-85 320.1 246 63.8
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.0e-85 319.7 233 67.0
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.0e-85 319.7 233 67.0
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 2.6e-85 319.3 248 64.1
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 5.8e-85 318.2 227 67.0
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.3e-84 317.0 235 66.0
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 1.3e-84 317.0 219 67.6
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 2.2e-84 316.2 255 62.7
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 2.4e-83 312.8 220 66.8
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 3.2e-83 312.4 220 69.5
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 1.6e-82 310.1 218 68.3
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 3.5e-82 308.9 222 67.1
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 4.6e-82 308.5 222 67.1
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 6.0e-82 308.1 202 72.3
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 1.8e-81 306.6 252 60.3
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 5.1e-81 305.1 252 59.9
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 1.9e-80 303.1 234 61.5
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 9.6e-80 300.8 219 65.3
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 4.8e-79 298.5 206 69.9
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 1.1e-78 297.4 229 63.8
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 3.1e-78 295.8 236 62.7
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 2.9e-76 289.3 240 61.7
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 1.3e-73 280.4 200 69.0
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 1.8e-73 280.0 227 61.2
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 6.7e-73 278.1 210 64.8
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 3.3e-72 275.8 197 67.5
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 1.8e-70 270.0 263 54.8
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 9.0e-70 267.7 197 65.5
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 2.6e-69 266.2 198 64.6
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 3.8e-68 262.3 233 62.7
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 2.8e-63 246.1 116 98.3
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 2.2e-60 236.5 219 56.2
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 4.6e-58 228.8 209 52.6
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 6.3e-55 218.4 217 53.5
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 2.9e-52 209.5 209 48.3
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 2.1e-50 203.4 133 72.9
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 1.5e-43 180.6 234 46.6
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 1.4e-41 174.1 229 44.5
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 1.1e-40 171.0 118 68.6
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 2.6e-40 169.9 266 35.7
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 8.2e-39 164.9 135 58.5
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.0e-37 160.2 227 43.6
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 1.3e-36 157.5 118 61.9
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.2e-36 156.8 118 64.4
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 9.4e-35 151.4 168 44.6
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 3.4e-32 142.9 113 61.9
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 8.0e-26 121.7 103 57.3
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 9.8e-24 114.8 173 38.2
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 3.8e-20 102.8 176 36.9
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 3.7e-15 86.3 174 28.7
Potri.017G115350 Populus trichocarpa HOM05D006950 ORTHO05D008798 1.2e-08 64.7 74 41.9
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 4.9e-07 59.3 35 80.0
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 4.9e-07 59.3 126 33.3
MBI03_g28954_MAGBIO Magnolia biondii HOM05D000916 ORTHO05D007921 6.4e-07 58.9 142 31.0
Oeu051786.1 Olea europaea HOM05D000916 ORTHO05D007921 6.4e-07 58.9 156 33.3
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 2.4e-06 57.0 30 73.3
Mapoly0026s0052 Marchantia polymorpha HOM05D000224 ORTHO05D001489 4.1e-06 56.2 149 26.2
Medtr1g076920 Medicago truncatula HOM05D000916 ORTHO05D007921 4.1e-06 56.2 142 32.4
MSTRG.25473 Avicennia marina HOM05D000916 ORTHO05D007921 5.4e-06 55.8 136 33.1
VMungo0720G0569 Vigna mungo HOM05D000916 ORTHO05D007921 7.0e-06 55.5 158 29.7


User provided reference genes

Program Settings