Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 5.0e-148 527.7 258 100.0
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 5.0e-148 527.7 258 100.0
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 1.4e-126 456.4 331 74.0
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 5.3e-73 278.5 368 47.3
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 9.9e-72 274.2 350 48.3
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 1.6e-69 266.9 337 46.6
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 7.9e-69 264.6 214 59.8
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 3.9e-68 262.3 336 47.9
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 5.1e-68 261.9 397 42.1
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 9.6e-67 257.7 346 44.2
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 1.6e-66 256.9 308 48.4
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 8.1e-66 254.6 313 47.3
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 1.1e-65 254.2 311 47.6
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 1.4e-65 253.8 290 48.6
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 6.9e-65 251.5 313 47.0
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 6.9e-65 251.5 282 48.6
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 9.0e-65 251.1 294 47.3
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.5e-64 250.4 314 46.8
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.5e-64 250.4 314 46.8
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 1.5e-64 250.4 344 44.5
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 1.5e-64 250.4 334 44.9
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 2.6e-64 249.6 336 43.8
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 2.6e-64 249.6 283 48.8
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 4.5e-64 248.8 267 50.2
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 5.8e-64 248.4 320 45.9
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 2.2e-63 246.5 321 45.5
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 8.4e-63 244.6 319 46.4
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 1.9e-62 243.4 311 46.0
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 7.1e-62 241.5 308 47.7
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 2.7e-61 239.6 279 49.5
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 3.5e-61 239.2 277 48.4
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 4.6e-61 238.8 282 46.8
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 1.0e-60 237.7 263 51.0
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 1.0e-60 237.7 319 43.9
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 1.8e-60 236.9 310 45.8
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 2.3e-60 236.5 321 43.9
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 3.0e-60 236.1 321 44.5
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 6.7e-60 235.0 173 68.8
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 8.7e-60 234.6 325 43.7
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 1.5e-59 233.8 258 47.3
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 1.9e-59 233.4 275 45.8
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 4.3e-59 232.3 275 46.2
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 4.8e-58 228.8 275 47.3
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 1.1e-57 227.6 277 44.4
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 3.1e-57 226.1 143 72.0
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 4.0e-57 225.7 309 41.7
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 4.0e-57 225.7 275 45.1
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 4.0e-57 225.7 282 45.7
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 5.3e-57 225.3 141 70.9
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 1.2e-56 224.2 341 39.9
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 2.0e-56 223.4 319 41.1
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 2.0e-56 223.4 143 69.9
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 2.6e-56 223.0 281 42.7
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 3.4e-56 222.6 343 39.1
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 5.8e-56 221.9 287 43.6
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 5.8e-56 221.9 273 44.7
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 1.0e-55 221.1 256 45.3
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 1.7e-55 220.3 273 42.9
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 4.9e-55 218.8 283 44.2
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 4.9e-55 218.8 256 44.9
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 8.4e-55 218.0 255 45.5
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 8.4e-55 218.0 255 45.5
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 8.4e-55 218.0 255 45.5
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 8.4e-55 218.0 279 43.4
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 1.9e-54 216.9 140 70.7
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 2.5e-54 216.5 231 46.8
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 3.2e-54 216.1 279 43.4
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 4.2e-54 215.7 277 43.0
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 1.6e-53 213.8 323 40.6
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 2.1e-53 213.4 257 44.0
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 3.5e-53 212.6 286 45.1
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 3.5e-53 212.6 258 43.0
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 6.0e-53 211.8 325 38.8
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 2.3e-52 209.9 141 65.2
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 6.7e-52 208.4 279 44.4
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 6.7e-52 208.4 282 40.4
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 6.7e-52 208.4 243 47.3
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 1.9e-51 206.8 289 41.9
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 4.3e-51 205.7 143 64.3
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 5.7e-51 205.3 258 42.6
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 2.8e-50 203.0 295 41.4
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 1.1e-49 201.1 131 69.5
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 4.1e-49 199.1 225 48.9
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 1.2e-48 197.6 252 42.9
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 1.5e-48 197.2 137 67.2
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 2.0e-48 196.8 271 40.6
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 2.0e-48 196.8 251 43.8
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 3.4e-48 196.1 131 67.9
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 7.6e-48 194.9 123 70.7
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 3.8e-47 192.6 141 58.2
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 5.0e-47 192.2 136 62.5
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.4e-46 190.7 136 64.0
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 1.6e-45 187.2 247 42.1
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 6.1e-45 185.3 272 39.7
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 6.7e-44 181.8 242 44.2
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 2.5e-43 179.9 140 56.4
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 2.8e-42 176.4 173 53.8
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 4.8e-42 175.6 131 63.4
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 8.2e-42 174.9 282 36.2
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 3.1e-41 172.9 265 40.4
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.7e-39 167.2 124 61.3
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 2.7e-37 159.8 148 50.7
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 2.7e-37 159.8 148 50.7
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 6.1e-37 158.7 264 34.5
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 1.3e-34 151.0 282 37.9
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 3.4e-32 142.9 187 40.6
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 3.8e-31 139.4 94 69.1
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 2.7e-29 133.3 292 29.8
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 4.8e-26 122.5 138 43.5
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 1.6e-13 80.9 108 37.0
Haze_17459 Corylus avellana HOM05D006863 ORTHO05D044797 4.1e-09 66.2 98 44.9
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 6.5e-07 58.9 112 40.2
Psat2g101840 Pisum sativum HOM05D006863 ORTHO05D044797 1.5e-06 57.8 53 54.7


User provided reference genes

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