Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013881 Camellia sinensis var. sinensis HOM05D022417 ORTHO05D109850 4.9e-38 160.6 79 100.0
CSS0048421 Camellia sinensis var. sinensis HOM05D022417 ORTHO05D111325 1.1e-37 159.5 79 98.7
CSS0020499 Camellia sinensis var. sinensis HOM05D022417 ORTHO05D109813 1.6e-28 129.0 79 82.3
CSS0004400 Camellia sinensis var. sinensis HOM05D022417 ORTHO05D113399 3.5e-28 127.9 79 82.3
CSS0036800 Camellia sinensis var. sinensis HOM05D022417 ORTHO05D110288 6.0e-28 127.1 79 81.0
CSS0001432 Camellia sinensis var. sinensis HOM05D003089 ORTHO05D003544 7.6e-07 57.0 30 83.3
Actinidia07473 Actinidia chinensis HOM05D003089 ORTHO05D003544 1.7e-06 55.8 30 83.3
Lj1g0018032 Lotus japonicus HOM05D003089 ORTHO05D003544 1.7e-06 55.8 30 83.3
Lalb_Chr08g0246561 Lupinus albus HOM05D003089 ORTHO05D003544 1.7e-06 55.8 30 83.3
Lalb_Chr23g0265471 Lupinus albus HOM05D003089 ORTHO05D003544 1.7e-06 55.8 30 83.3
SGA_v2.0_scaffold32G13157 Striga asiatica HOM05D003089 ORTHO05D003544 2.2e-06 55.5 30 83.3
FvH4_2g08470 Fragaria vesca HOM05D003089 ORTHO05D003544 2.9e-06 55.1 30 80.0
FAN24G1972 Fragaria x ananassa HOM05D003089 ORTHO05D003544 2.9e-06 55.1 30 80.0
FAN24G2674 Fragaria x ananassa HOM05D003089 ORTHO05D003544 2.9e-06 55.1 30 80.0
arahy.Tifrunner.gnm1.ann1.AHB8GW Arachis hypogaea HOM05D003089 ORTHO05D003544 3.8e-06 54.7 30 83.3
arahy.Tifrunner.gnm1.ann1.U64SVT Arachis hypogaea HOM05D003089 ORTHO05D003544 3.8e-06 54.7 30 83.3
Glyma.04G013900 Glycine max HOM05D003089 ORTHO05D003544 3.8e-06 54.7 30 80.0
Glyma.06G013800 Glycine max HOM05D003089 ORTHO05D003544 3.8e-06 54.7 30 80.0
Actinidia00513 Actinidia chinensis HOM05D003089 ORTHO05D003544 4.9e-06 54.3 30 80.0
Aqoxy3G03189 Aquilegia oxysepala HOM05D003089 ORTHO05D003544 4.9e-06 54.3 30 76.7
Ca_15379_v3 Cicer arietinum L. HOM05D003089 ORTHO05D003544 4.9e-06 54.3 30 80.0
Migut.B00253 Erythranthe guttata HOM05D003089 ORTHO05D003544 4.9e-06 54.3 30 80.0
Oeu020770.2 Olea europaea HOM05D003089 ORTHO05D003544 4.9e-06 54.3 30 80.0
AL325U10010 Arabidopsis lyrata HOM05D003089 ORTHO05D003544 6.4e-06 53.9 30 80.0
AL4G25950 Arabidopsis lyrata HOM05D003089 ORTHO05D003544 6.4e-06 53.9 30 80.0
Haze_02363 Corylus avellana HOM05D003089 ORTHO05D003544 6.4e-06 53.9 30 76.7
FAN15G0570 Fragaria x ananassa HOM05D003089 ORTHO05D003544 6.4e-06 53.9 30 76.7
Gohir.D04G158700 Gossypium hirsutum HOM05D003089 ORTHO05D003544 6.4e-06 53.9 30 80.0
Gorai.012G146100 Gossypium raimondii HOM05D003089 ORTHO05D003544 6.4e-06 53.9 30 80.0
Prupe.8G100100 Prunus persica HOM05D003089 ORTHO05D003544 6.4e-06 53.9 30 80.0
unitig_61.g25998 Utricularia gibba HOM05D003089 ORTHO05D003544 6.4e-06 53.9 30 80.0
MD05G1068200 Malus domestica HOM05D003089 ORTHO05D003544 8.4e-06 53.5 30 80.0
MD10G1078200 Malus domestica HOM05D003089 ORTHO05D003544 8.4e-06 53.5 30 80.0
Solyc11g043120.2 Solanum lycopersicum HOM05D003089 ORTHO05D003544 8.4e-06 53.5 30 80.0
Sopen11g019550 Solanum pennellii HOM05D003089 ORTHO05D003544 8.4e-06 53.5 30 80.0


User provided reference genes

Program Settings