Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013872 Camellia sinensis var. sinensis HOM05D022962 ORTHO05D012472 1.6e-99 366.3 216 100.0
CSS0024245 Camellia sinensis var. sinensis HOM05D022962 ORTHO05D012472 1.0e-69 267.3 231 76.6
CSS0038611 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 1.0e-66 257.3 240 60.0
CSS0047359 Camellia sinensis var. sinensis HOM05D022962 ORTHO05D012472 1.7e-64 250.0 232 73.3
vmacro07813 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 8.4e-16 88.2 151 41.1
Atru.chr1.3962 Acer truncatum HOM05D000009 ORTHO05D000008 3.0e-13 79.7 257 30.0
Medtr6g052760 Medicago truncatula HOM05D000009 ORTHO05D000008 2.1e-11 73.6 139 40.3
Nn5g28245 Nelumbo nucifera HOM05D013254 ORTHO05D015085 2.8e-11 73.2 122 41.8
RhsimUnG0022400 Rhododendron simsii HOM05D000009 ORTHO05D000008 2.8e-11 73.2 132 39.4
EL10Ac6g14531 Beta vulgaris HOM05D000009 ORTHO05D000008 8.2e-11 71.6 124 36.3
Cc00_g11540 Coffea canephora HOM05D000009 ORTHO05D000008 1.8e-10 70.5 161 32.9
Medtr6g052455 Medicago truncatula HOM05D000009 ORTHO05D000008 1.8e-10 70.5 136 36.8
Rhsim03G0042400 Rhododendron simsii HOM05D000009 ORTHO05D000008 3.1e-10 69.7 98 45.9
Hma1.2p1_1168F.1_g263080 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 4.1e-10 69.3 138 35.5
Hma1.2p1_1755F.1_g300960 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.2e-09 67.8 148 37.8
Phvul.002G131000 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.5e-09 67.4 135 34.8
Hma1.2p1_0973F.1_g243030 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 4.5e-09 65.9 167 32.3
EL10As8g23894 Beta vulgaris HOM05D000009 ORTHO05D000008 1.0e-08 64.7 130 33.8
Cc08_g05270 Coffea canephora HOM05D000009 ORTHO05D000008 1.0e-08 64.7 167 31.7
Cc06_g17040 Coffea canephora HOM05D000009 ORTHO05D000008 2.9e-08 63.2 116 37.9
QL07p029392 Quercus lobata HOM05D000009 ORTHO05D012472 2.9e-08 63.2 107 38.3
Dinv12471 Davidia involucrata HOM05D000009 ORTHO05D000008 3.8e-08 62.8 134 34.3
TWI32G1271 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 5.0e-08 62.4 185 29.7
Cc08_g04160 Coffea canephora HOM05D000009 ORTHO05D000008 6.5e-08 62.0 112 35.7
Medtr0511s0020 Medicago truncatula HOM05D000009 ORTHO05D000008 6.5e-08 62.0 135 36.3
Phvul.002G130666 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.1e-07 61.2 145 31.0
GSVIVG01032150001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.4e-07 60.8 134 33.6
Cc08_g04240 Coffea canephora HOM05D000009 ORTHO05D012472 1.9e-07 60.5 161 32.9
AUR62015711 Chenopodium quinoa HOM05D000009 ORTHO05D000008 3.2e-07 59.7 183 30.1
Gohir.A10G015620 Gossypium hirsutum HOM05D000009 ORTHO05D000008 3.2e-07 59.7 127 38.6
MBI13_g15304_MAGBIO Magnolia biondii HOM05D000009 ORTHO05D006588 7.2e-07 58.5 136 36.0
QL12p011837 Quercus lobata HOM05D000009 ORTHO05D000008 7.2e-07 58.5 55 52.7
TPR.G10308 Trifolium pratense HOM05D000009 ORTHO05D012472 7.2e-07 58.5 122 37.7
Haze_19834 Corylus avellana HOM05D000009 ORTHO05D000008 9.3e-07 58.2 135 36.3
COL.COLO4_36046 Corchorus olitorius HOM05D000009 ORTHO05D000008 1.2e-06 57.8 144 31.2
Duzib212G0258 Durio zibethinus HOM05D000009 ORTHO05D000008 1.6e-06 57.4 127 35.4
Hma1.2p1_0924F.1_g237240 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.6e-06 57.4 156 31.4
QL04p007111 Quercus lobata HOM05D000009 ORTHO05D000008 1.6e-06 57.4 143 35.7
AUR62020496 Chenopodium quinoa HOM05D000009 ORTHO05D000008 2.1e-06 57.0 183 30.1
QL11p012087 Quercus lobata HOM05D000009 ORTHO05D000008 2.1e-06 57.0 78 43.6
RcHm_v2.0_Chr1g0317761 Rosa chinensis HOM05D000009 ORTHO05D000008 2.1e-06 57.0 175 33.7
TWI09G0612 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 2.1e-06 57.0 133 33.1
Eucgr.K02012 Eucalyptus grandis HOM05D000009 ORTHO05D000008 2.7e-06 56.6 118 37.3
GSVIVG01001448001 Vitis vinifera HOM05D000009 ORTHO05D000008 3.6e-06 56.2 146 29.5
Dinv43408 Davidia involucrata HOM05D000009 ORTHO05D000008 4.6e-06 55.8 138 36.2
Eucgr.K02016 Eucalyptus grandis HOM05D000009 ORTHO05D000008 4.6e-06 55.8 195 28.7
Gohir.A08G055500 Gossypium hirsutum HOM05D000009 ORTHO05D000008 4.6e-06 55.8 135 33.3
Rhsim03G0042700 Rhododendron simsii HOM05D000009 ORTHO05D000008 4.6e-06 55.8 202 28.7
TPR.G26700 Trifolium pratense HOM05D022962 ORTHO05D012472 4.6e-06 55.8 72 43.1
Duzib212G0214 Durio zibethinus HOM05D000009 ORTHO05D000008 6.1e-06 55.5 65 47.7
FAN26G0027 Fragaria x ananassa HOM05D022962 ORTHO05D012472 6.1e-06 55.5 132 35.6
Gohir.A13G197400 Gossypium hirsutum HOM05D000009 ORTHO05D000008 6.1e-06 55.5 199 27.1
Hma1.2p1_1041F.1_g251000 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 6.1e-06 55.5 159 31.4
CiPaw.13G156300 Carya illinoinensis HOM05D000009 ORTHO05D000008 7.9e-06 55.1 161 33.5
Duzib212G0829 Durio zibethinus HOM05D000009 ORTHO05D010993 7.9e-06 55.1 65 47.7
Eucgr.K01864 Eucalyptus grandis HOM05D000009 ORTHO05D000008 7.9e-06 55.1 160 32.5
Oeu047580.3 Olea europaea HOM05D000009 ORTHO05D000008 7.9e-06 55.1 177 31.1
QL04p005691 Quercus lobata HOM05D000009 ORTHO05D000008 7.9e-06 55.1 140 33.6


User provided reference genes

Program Settings