Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 1.3e-216 756.1 388 100.0
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 4.8e-187 657.9 342 99.4
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 3.8e-160 568.5 357 81.8
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 1.4e-157 560.1 356 80.9
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 1.6e-153 546.6 343 82.2
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.1e-146 523.9 354 75.7
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 1.1e-146 523.9 356 75.0
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 5.2e-141 505.0 357 72.0
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 2.6e-140 502.7 356 74.4
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 1.1e-138 497.3 357 71.7
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.4e-138 496.9 356 71.6
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 2.3e-136 489.6 358 70.4
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 4.4e-132 475.3 357 67.8
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 7.5e-132 474.6 350 69.4
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 2.9e-131 472.6 348 68.7
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 2.9e-131 472.6 357 68.9
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 6.4e-131 471.5 357 68.6
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 1.1e-130 470.7 359 68.2
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 2.4e-130 469.5 357 65.3
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 2.7e-129 466.1 357 67.5
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 3.9e-128 462.2 358 65.9
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 5.0e-128 461.8 358 65.9
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 1.1e-127 460.7 357 65.0
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 1.6e-126 456.8 358 66.2
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 4.7e-126 455.3 357 65.5
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.1e-125 454.1 357 65.0
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 5.2e-125 451.8 356 64.6
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 6.8e-125 451.4 358 65.4
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 1.5e-124 450.3 357 64.1
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 2.0e-124 449.9 357 64.7
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 2.6e-124 449.5 356 64.6
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 3.4e-124 449.1 358 65.9
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.1e-122 444.1 357 63.6
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 4.1e-122 442.2 356 63.5
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 6.6e-120 434.9 358 63.7
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 1.9e-119 433.3 359 61.8
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 4.3e-119 432.2 343 65.6
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 9.5e-119 431.0 358 62.6
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 3.6e-118 429.1 356 63.2
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 6.2e-118 428.3 357 62.5
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 1.4e-117 427.2 358 61.2
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 2.3e-117 426.4 357 62.2
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 4.4e-116 422.2 357 61.9
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 1.7e-115 420.2 351 62.1
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 3.7e-115 419.1 266 82.7
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 4.9e-115 418.7 359 60.4
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.4e-114 417.2 338 64.8
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 1.9e-114 416.8 362 61.0
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 5.4e-114 415.2 350 61.1
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 1.6e-113 413.7 359 58.8
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 3.0e-112 409.5 374 58.8
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 6.6e-112 408.3 342 61.1
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 7.3e-111 404.8 342 62.9
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 2.1e-110 403.3 347 60.5
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 6.2e-110 401.7 357 58.3
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 5.2e-109 398.7 357 58.5
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 8.4e-107 391.3 356 59.0
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 9.2e-106 387.9 296 66.6
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 1.7e-104 383.6 361 56.2
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 1.5e-103 380.6 297 66.7
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 2.5e-103 379.8 264 74.6
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 1.6e-102 377.1 348 56.6
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 4.0e-101 372.5 350 55.7
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 5.3e-101 372.1 358 54.5
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 2.9e-99 366.3 346 56.6
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 1.4e-98 364.0 357 55.5
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 7.8e-97 358.2 343 55.7
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 1.1e-95 354.4 261 68.2
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 3.1e-93 346.3 355 52.4
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 1.5e-92 344.0 355 51.8
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 3.4e-92 342.8 384 49.0
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 1.3e-91 340.9 362 54.7
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 3.9e-88 329.3 338 52.7
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 1.9e-87 327.0 237 75.5
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 2.5e-87 326.6 363 49.0
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 9.6e-87 324.7 262 64.5
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 1.1e-85 321.2 355 49.3
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 1.1e-85 321.2 348 50.6
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 7.6e-84 315.1 355 49.0
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 1.0e-83 314.7 355 48.7
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 4.2e-82 309.3 348 47.7
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 5.5e-82 308.9 348 49.1
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 9.3e-82 308.1 348 48.3
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 5.1e-80 302.4 456 43.2
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 2.5e-79 300.1 348 47.7
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 5.8e-76 288.9 363 45.2
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 1.5e-71 274.2 347 46.7
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 6.3e-70 268.9 346 45.1
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 7.7e-68 261.9 235 58.7
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 6.7e-64 248.8 360 43.1
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 2.4e-61 240.4 357 42.0
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 3.7e-54 216.5 374 38.8
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 1.7e-51 207.6 377 37.9
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 3.8e-51 206.5 263 45.6
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 1.5e-50 204.5 375 37.6
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 4.8e-46 189.5 143 68.5
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 4.5e-44 183.0 133 70.7
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 2.2e-38 164.1 197 47.7
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 1.4e-37 161.4 375 34.7
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 1.4e-37 161.4 315 38.1
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 2.2e-35 154.1 311 37.3
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 4.2e-34 149.8 156 51.9
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 7.2e-34 149.1 151 55.0
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 9.8e-31 138.7 94 67.0
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.1e-29 135.2 149 55.0
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 8.6e-27 125.6 410 27.8
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 6.8e-24 115.9 114 58.8
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 2.9e-22 110.5 93 52.7
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 2.9e-22 110.5 100 57.0
Hma1.2p1_0979F.1_g243630 Hydrangea macrophylla HOM05D003435 ORTHO05D004032 7.5e-07 59.3 76 50.0
Cre09.g393580 Chlamydomonas reinhardtii HOM05D007389 ORTHO05D143270 4.9e-06 56.6 124 34.7


User provided reference genes

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