Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 1.3e-171 606.3 316 100.0
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 1.9e-101 373.2 291 68.0
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 8.3e-97 357.8 262 70.6
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 7.1e-96 354.8 263 71.5
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 7.1e-96 354.8 329 61.7
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 7.8e-95 351.3 308 62.7
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 1.1e-93 347.4 293 63.1
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 4.3e-93 345.5 321 60.4
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 7.3e-93 344.7 265 67.9
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 7.3e-93 344.7 306 63.7
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 4.0e-91 339.0 321 56.1
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 1.5e-90 337.0 265 68.3
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 2.0e-90 336.7 321 60.7
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 5.8e-90 335.1 300 63.0
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 2.2e-89 333.2 266 66.5
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 2.2e-89 333.2 263 66.5
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 4.9e-89 332.0 263 65.4
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 8.4e-89 331.3 265 66.0
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 1.4e-88 330.5 306 60.5
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 5.4e-88 328.6 202 79.2
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 5.4e-88 328.6 306 60.5
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 5.4e-88 328.6 323 56.3
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 7.1e-88 328.2 301 60.5
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 4.6e-87 325.5 308 59.7
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 4.6e-87 325.5 214 75.2
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 6.0e-87 325.1 305 60.3
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 1.0e-86 324.3 253 66.4
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 1.0e-86 324.3 323 56.3
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 6.6e-86 321.6 295 59.3
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 8.7e-86 321.2 197 79.2
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 8.7e-86 321.2 214 74.3
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 1.1e-85 320.9 291 59.5
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 1.5e-85 320.5 292 59.6
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 7.3e-85 318.2 265 61.9
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 1.3e-84 317.4 285 59.6
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 3.6e-84 315.8 283 60.4
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 3.6e-84 315.8 291 60.8
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 6.2e-84 315.1 291 58.1
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 6.2e-84 315.1 263 62.4
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 1.1e-83 314.3 290 62.8
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 2.4e-83 313.2 213 72.8
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 5.3e-83 312.0 214 72.0
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 2.6e-82 309.7 270 62.6
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 3.2e-80 302.8 258 62.0
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 3.2e-80 302.8 318 52.8
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 4.2e-80 302.4 319 56.4
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 1.2e-79 300.8 200 76.0
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 1.6e-79 300.4 200 75.5
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 6.0e-79 298.5 261 61.7
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 8.7e-78 294.7 264 58.3
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 1.5e-77 293.9 265 59.2
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 5.6e-77 292.0 263 56.7
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 7.3e-77 291.6 261 56.7
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 1.3e-76 290.8 261 58.2
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 1.6e-76 290.4 262 56.5
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 2.1e-76 290.0 244 62.7
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 4.8e-76 288.9 215 67.9
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 8.1e-76 288.1 262 57.6
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 8.1e-76 288.1 262 57.6
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 8.1e-76 288.1 242 64.9
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 1.1e-75 287.7 284 54.9
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 1.8e-75 287.0 264 55.7
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 2.4e-75 286.6 261 57.5
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 2.4e-75 286.6 265 59.2
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 5.3e-75 285.4 262 56.5
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 5.3e-75 285.4 312 49.4
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 9.0e-75 284.6 263 57.0
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 1.2e-74 284.3 263 57.0
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 1.2e-74 284.3 206 67.5
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 1.5e-74 283.9 263 59.3
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 3.0e-70 269.6 247 61.5
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 3.3e-69 266.2 319 51.1
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 3.3e-69 266.2 306 48.4
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 9.6e-69 264.6 268 52.2
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 4.0e-67 259.2 301 52.8
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 5.3e-67 258.8 288 50.3
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 9.0e-67 258.1 239 57.3
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 3.4e-66 256.1 257 56.4
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 2.2e-65 253.4 266 57.1
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 6.5e-65 251.9 251 58.6
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 3.0e-62 243.0 391 41.7
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 3.0e-62 243.0 243 58.8
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 1.8e-59 233.8 243 53.5
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 9.0e-59 231.5 342 46.5
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 2.1e-55 220.3 269 48.0
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 3.7e-52 209.5 141 69.5
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 2.7e-47 193.4 98 100.0
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 8.8e-46 188.3 182 61.5
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 3.3e-45 186.4 294 39.1
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 1.4e-43 181.0 264 39.4
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 9.1e-43 178.3 281 36.3
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 4.4e-37 159.5 243 42.4
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 7.4e-37 158.7 150 58.0
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 7.0e-35 152.1 142 60.6
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 2.6e-34 150.2 179 50.8
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 1.4e-30 137.9 204 46.1
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 2.6e-26 123.6 151 44.4
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 9.4e-24 115.2 207 31.9
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 2.0e-21 107.5 192 31.8
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 6.3e-20 102.4 137 49.6
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 4.5e-18 96.3 62 69.4
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 4.5e-18 96.3 90 52.2
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 1.3e-17 94.7 164 38.4
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 2.7e-15 87.0 117 37.6
CiPaw.09G014900 Carya illinoinensis HOM05D002970 ORTHO05D009571 3.6e-07 60.1 134 41.0
CiPaw.11G163100 Carya illinoinensis HOM05D002970 ORTHO05D009571 3.6e-07 60.1 134 41.0


User provided reference genes

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