Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013667 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 1.5e-50 202.6 103 100.0
Actinidia31123 Actinidia chinensis HOM05D007236 ORTHO05D009150 3.6e-33 144.8 82 86.6
Lj9A543T71 Lonicera japonica HOM05D007236 ORTHO05D009150 8.1e-33 143.7 88 81.8
Rhsim02G0000100 Rhododendron simsii HOM05D007236 ORTHO05D009150 8.1e-33 143.7 82 87.8
Dinv20327 Davidia involucrata HOM05D007236 ORTHO05D009150 5.8e-31 137.5 87 79.3
Cc04_g00020 Coffea canephora HOM05D007236 ORTHO05D009150 7.5e-31 137.1 87 80.5
TWI18G0405 Tripterygium wilfordii HOM05D007236 ORTHO05D009150 7.5e-31 137.1 87 78.2
Ciclev10013942m.g Citrus clementina HOM05D007236 ORTHO05D009150 1.3e-30 136.3 87 79.3
Nn5g27081 Nelumbo nucifera HOM05D007236 ORTHO05D009150 1.3e-30 136.3 87 78.2
GSVIVG01029561001 Vitis vinifera HOM05D007236 ORTHO05D009150 1.3e-30 136.3 87 78.2
Lj3g0020822 Lotus japonicus HOM05D007236 ORTHO05D009150 6.4e-30 134.0 87 77.0
Manes.06G179100 Manihot esculenta HOM05D007236 ORTHO05D009150 6.4e-30 134.0 87 77.0
Psat7g265040 Pisum sativum HOM05D007236 ORTHO05D009150 6.4e-30 134.0 81 80.2
TAR636G0504 Trochodendron aralioides HOM05D007236 ORTHO05D009150 6.4e-30 134.0 87 75.9
CiPaw.01G207800 Carya illinoinensis HOM05D007236 ORTHO05D009150 8.3e-30 133.7 81 80.2
arahy.Tifrunner.gnm1.ann1.I3AU87 Arachis hypogaea HOM05D007236 ORTHO05D009150 1.1e-29 133.3 87 78.2
arahy.Tifrunner.gnm1.ann1.QM8PPU Arachis hypogaea HOM05D007236 ORTHO05D009150 1.1e-29 133.3 87 78.2
Haze_16198 Corylus avellana HOM05D007236 ORTHO05D009150 1.9e-29 132.5 81 79.0
Medtr4g005300 Medicago truncatula HOM05D007236 ORTHO05D009150 1.9e-29 132.5 87 77.0
Prupe.3G024200 Prunus persica HOM05D007236 ORTHO05D009150 1.9e-29 132.5 87 74.7
Hund05669 Selenicereus undatus HOM05D007236 ORTHO05D009150 1.9e-29 132.5 81 80.2
Potri.008G003800 Populus trichocarpa HOM05D007236 ORTHO05D009150 2.4e-29 132.1 81 80.2
FvH4_6g36830 Fragaria vesca HOM05D007236 ORTHO05D009150 3.2e-29 131.7 87 73.6
FAN14G0281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 3.2e-29 131.7 87 73.6
RcHm_v2.0_Chr2g0149221 Rosa chinensis HOM05D007236 ORTHO05D009150 3.2e-29 131.7 87 74.7
vmacro12583 Vaccinium macrocarpon HOM05D007236 ORTHO05D009150 3.2e-29 131.7 88 76.1
Oeu039939.2 Olea europaea HOM05D007236 ORTHO05D009150 5.4e-29 131.0 87 77.0
Thecc.06G055000 Theobroma cacao HOM05D007236 ORTHO05D009150 5.4e-29 131.0 87 74.7
Ca_20979_v3 Cicer arietinum L. HOM05D007236 ORTHO05D009150 9.2e-29 130.2 87 75.9
FAN05G3464 Fragaria x ananassa HOM05D007236 ORTHO05D009150 9.2e-29 130.2 87 72.4
TPR.G38815 Trifolium pratense HOM05D007236 ORTHO05D009150 1.2e-28 129.8 87 74.7
Glyma.07G001600 Glycine max HOM05D007236 ORTHO05D009150 1.6e-28 129.4 87 73.6
Duzib160G0063 Durio zibethinus HOM05D007236 ORTHO05D009150 2.7e-28 128.6 81 76.5
FAN09G1281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 3.5e-28 128.3 87 71.3
Eucgr.J03184 Eucalyptus grandis HOM05D007236 ORTHO05D009150 6.0e-28 127.5 87 72.4
Lalb_Chr01g0011631 Lupinus albus HOM05D007236 ORTHO05D009150 6.0e-28 127.5 87 72.4
QL05p088536 Quercus lobata HOM05D007236 ORTHO05D009150 6.0e-28 127.5 81 77.8
Lsat_1_v5_gn_5_137160 Lactuca sativa HOM05D007236 ORTHO05D009150 7.8e-28 127.1 86 70.9
Peaxi162Scf00038g02668 Petunia axillaris HOM05D007236 ORTHO05D009150 7.8e-28 127.1 81 75.3
CANSAT01G0299 Cannabis sativa HOM05D007236 ORTHO05D009150 1.7e-27 125.9 88 73.9
ECA234G1409 Erigeron canadensis HOM05D007236 ORTHO05D009150 2.3e-27 125.6 81 76.5
Solyc03g124030.4 Solanum lycopersicum HOM05D007236 ORTHO05D009150 2.3e-27 125.6 81 76.5
Sopen03g041760 Solanum pennellii HOM05D007236 ORTHO05D009150 2.3e-27 125.6 81 76.5
CAN.G790.6 Capsicum annuum HOM05D007236 ORTHO05D009150 3.0e-27 125.2 81 76.5
Glyma.08G225400 Glycine max HOM05D007236 ORTHO05D009150 3.0e-27 125.2 81 76.5
AUR62025709 Chenopodium quinoa HOM05D007236 ORTHO05D009150 3.9e-27 124.8 81 75.3
Sabra08G0001500 Salix brachista HOM05D007236 ORTHO05D009150 3.9e-27 124.8 85 75.3
Sc12g0011240 Simmondsia chinensis HOM05D000518 ORTHO05D000737 3.9e-27 124.8 81 74.1
PGR031G2337 Punica granatum HOM05D007236 ORTHO05D009150 6.6e-27 124.0 87 69.0
Aqoxy5G00022 Aquilegia oxysepala HOM05D007236 ORTHO05D009150 8.6e-27 123.6 82 72.0
VMungo0331G1697 Vigna mungo HOM05D007236 ORTHO05D009150 1.5e-26 122.9 87 71.3
HanXRQChr10g0311241 Helianthus annuus HOM05D007236 ORTHO05D009150 1.9e-26 122.5 86 70.9
AUR62001326 Chenopodium quinoa HOM05D007236 ORTHO05D009150 2.5e-26 122.1 81 72.8
MD09G1166500 Malus domestica HOM05D007236 ORTHO05D009150 2.5e-26 122.1 87 69.0
Sc12g0011350 Simmondsia chinensis HOM05D007236 ORTHO05D009150 2.5e-26 122.1 81 72.8
ClCG07G014680 Citrullus lanatus HOM05D007236 ORTHO05D009150 7.3e-26 120.6 87 70.1
Migut.I01208 Erythranthe guttata HOM05D007236 ORTHO05D009150 2.1e-25 119.0 87 64.4
Gohir.A06G116300 Gossypium hirsutum HOM05D007236 ORTHO05D009150 2.1e-25 119.0 87 69.0
Gohir.D06G121200 Gossypium hirsutum HOM05D007236 ORTHO05D009150 2.1e-25 119.0 87 69.0
Gorai.010G141500 Gossypium raimondii HOM05D007236 ORTHO05D009150 2.1e-25 119.0 87 69.0
THA.LOC104812331 Tarenaya hassleriana HOM05D007236 ORTHO05D009150 3.6e-25 118.2 81 72.8
Cpa.g.sc176.15 Carica papaya HOM05D007236 ORTHO05D009150 6.2e-25 117.5 113 57.5
CARHR072510 Cardamine hirsuta HOM05D007236 ORTHO05D009150 1.4e-24 116.3 81 71.6
MELO3C026715.2 Cucumis melo HOM05D007236 ORTHO05D009150 1.4e-24 116.3 87 66.7
SGA_v2.0_scaffold71G23973 Striga asiatica HOM05D007236 ORTHO05D009150 1.4e-24 116.3 87 65.5
Thhalv10018805m.g Eutrema salsugineum HOM05D007236 ORTHO05D009150 4.0e-24 114.8 81 70.4
CsaV3_3G030460 Cucumis sativus L. HOM05D007236 ORTHO05D009150 6.8e-24 114.0 87 65.5
DCAR_016079 Daucus carota HOM05D007236 ORTHO05D009150 6.8e-24 114.0 87 64.4
Aa31LG4G2080 Aethionema arabicum HOM05D007236 ORTHO05D009150 8.9e-24 113.6 86 67.4
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 1.2e-23 113.2 87 65.5
C06p30340 Brassica napus HOM05D007236 ORTHO05D009150 1.2e-23 113.2 87 65.5
BolC6t38197H Brassica oleracea HOM05D007236 ORTHO05D009150 1.2e-23 113.2 87 65.5
BcaB02g07186 Brassica carinata HOM05D007236 ORTHO05D009150 1.5e-23 112.8 87 65.5
Sp5g33940 Schrenkiella parvula HOM05D007236 ORTHO05D009150 2.0e-23 112.5 81 69.1
Carub.0002s2575 Capsella rubella HOM05D007236 ORTHO05D009150 2.6e-23 112.1 81 67.9
AT1G78915 Arabidopsis thaliana HOM05D007236 ORTHO05D009150 3.4e-23 111.7 81 67.9
AL2G39340 Arabidopsis lyrata HOM05D007236 ORTHO05D009150 7.6e-23 110.5 81 67.9
CDE05G3570 Ceratophyllum demersum HOM05D007236 ORTHO05D008204 7.6e-23 110.5 81 63.0
A07p27420 Brassica napus HOM05D007236 ORTHO05D009150 2.9e-22 108.6 87 63.2
BraA07t30383Z Brassica rapa HOM05D007236 ORTHO05D009150 2.9e-22 108.6 87 63.2
Sed0012172 Sechium edule HOM05D007236 ORTHO05D009150 4.9e-22 107.8 87 62.1
ATR0215G005 Amborella trichopoda HOM05D007236 ORTHO05D009150 3.2e-21 105.1 81 64.2
SEGI_39602 Sequoiadendron giganteum HOM05D007236 ORTHO05D009150 9.2e-21 103.6 81 65.4
Zm00001eb305180 Zea mays HOM05D007236 ORTHO05D009150 1.6e-20 102.8 87 58.6
unitig_32.g11550 Utricularia gibba HOM05D007236 ORTHO05D009150 5.1e-19 97.8 81 56.8
EL10Ac7g18131 Beta vulgaris HOM05D007236 ORTHO05D009150 6.9e-16 87.4 57 71.9
COL.COLO4_31136 Corchorus olitorius HOM05D007236 ORTHO05D009150 9.9e-15 83.6 62 66.1
SMO117G0135 Selaginella moellendorffii HOM05D007236 ORTHO05D009150 4.6e-12 74.7 87 44.8
Aa31sc24G50 Aethionema arabicum HOM05D002308 ORTHO05D002535 4.8e-09 64.7 57 52.6
PSO170G4015 Papaver somniferum HOM05D007236 ORTHO05D009150 1.4e-08 63.2 36 83.3
PRCOL_00005889 Prasinoderma coloniale HOM05D007236 ORTHO05D009150 1.4e-08 63.2 81 44.4
PSO357G0009 Papaver somniferum HOM05D007236 ORTHO05D009150 7.6e-07 57.4 33 81.8


User provided reference genes

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