Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013660 Camellia sinensis var. sinensis HOM05D005753 ORTHO05D007034 2.1e-121 439.1 231 100.0
CSS0048434 Camellia sinensis var. sinensis HOM05D005753 ORTHO05D007034 2.8e-102 375.6 231 88.7
CSS0033352 Camellia sinensis var. sinensis HOM05D005753 ORTHO05D007034 1.1e-90 337.0 229 81.7
RhsimUnG0251100 Rhododendron simsii HOM05D005753 ORTHO05D007034 6.8e-64 248.1 223 63.2
Dinv40749 Davidia involucrata HOM05D005753 ORTHO05D007034 9.8e-63 244.2 235 63.0
Actinidia35339 Actinidia chinensis HOM05D005753 ORTHO05D007034 2.3e-59 233.0 220 64.1
Lj1A871G90 Lonicera japonica HOM05D005753 ORTHO05D007034 1.5e-47 193.7 232 51.3
vmacro09719 Vaccinium macrocarpon HOM05D005753 ORTHO05D007034 1.1e-42 177.6 271 44.6
GSVIVG01037637001 Vitis vinifera HOM05D005753 ORTHO05D007034 8.1e-41 171.4 233 48.5
Cfa020355 Carpinus fangiana HOM05D005753 ORTHO05D007034 1.8e-40 170.2 233 48.1
Dinv22267 Davidia involucrata HOM05D005753 ORTHO05D007034 5.3e-40 168.7 195 53.8
Thecc.07G038900 Theobroma cacao HOM05D005753 ORTHO05D007034 9.9e-39 164.5 236 47.0
TAR629G3535 Trochodendron aralioides HOM05D005753 ORTHO05D007034 4.2e-37 159.1 233 46.8
Oeu062590.1 Olea europaea HOM05D005753 ORTHO05D007034 1.9e-34 150.2 233 44.6
Haze_09667 Corylus avellana HOM05D005753 ORTHO05D007034 7.3e-34 148.3 187 50.3
Nn1g03551 Nelumbo nucifera HOM05D005753 ORTHO05D007034 7.3e-34 148.3 232 44.8
QL08p010535 Quercus lobata HOM05D005753 ORTHO05D007034 1.4e-32 144.1 233 45.5
Ciclev10007877m.g Citrus clementina HOM05D005753 ORTHO05D007034 2.6e-31 139.8 233 42.9
Peaxi162Scf00964g00029 Petunia axillaris HOM05D005753 ORTHO05D007034 3.4e-31 139.4 223 43.0
Manes.15G072600 Manihot esculenta HOM05D005753 ORTHO05D007034 4.5e-31 139.0 235 43.4
Sopen07g032730 Solanum pennellii HOM05D005753 ORTHO05D007034 9.9e-31 137.9 213 43.2
Duzib213G1063 Durio zibethinus HOM05D005753 ORTHO05D007034 2.9e-30 136.3 224 43.8
Actinidia10731 Actinidia chinensis HOM05D005753 ORTHO05D007034 3.8e-30 136.0 201 48.8
Solyc07g064550.3 Solanum lycopersicum HOM05D005753 ORTHO05D007034 1.1e-29 134.4 216 41.7
COL.COLO4_09655 Corchorus olitorius HOM05D005753 ORTHO05D007034 1.4e-29 134.0 241 41.1
Nitab4.5_0003812g0080 Nicotiana tabacum HOM05D005753 ORTHO05D004173 1.2e-28 131.0 209 40.2
PGSC0003DMG400022322 Solanum tuberosum HOM05D005753 ORTHO05D007034 1.6e-28 130.6 215 42.3
Atru.chr2.3344 Acer truncatum HOM05D005753 ORTHO05D007034 3.5e-28 129.4 231 42.4
CAN.G337.126 Capsicum annuum HOM05D005753 ORTHO05D007034 7.9e-28 128.3 211 39.3
MD03G1202100 Malus domestica HOM05D005753 ORTHO05D007034 7.9e-28 128.3 223 43.9
Manes.03G128700 Manihot esculenta HOM05D005753 ORTHO05D007034 8.7e-27 124.8 229 42.8
Nitab4.5_0001913g0030 Nicotiana tabacum HOM05D005753 ORTHO05D007034 1.1e-26 124.4 185 43.2
Potri.001G423200 Populus trichocarpa HOM05D005753 ORTHO05D007034 5.6e-26 122.1 237 40.9
RcHm_v2.0_Chr5g0039281 Rosa chinensis HOM05D005753 ORTHO05D007034 5.6e-26 122.1 231 42.9
Gorai.009G437800 Gossypium raimondii HOM05D005753 ORTHO05D007034 1.3e-25 120.9 233 41.2
Gohir.D05G369100 Gossypium hirsutum HOM05D005753 ORTHO05D007034 3.7e-25 119.4 234 41.5
FAN16G1141 Fragaria x ananassa HOM05D005753 ORTHO05D007034 4.8e-25 119.0 231 39.8
Oeu007583.4 Olea europaea HOM05D005753 ORTHO05D007034 8.1e-25 118.2 289 36.0
Potri.011G138600 Populus trichocarpa HOM05D005753 ORTHO05D007034 8.1e-25 118.2 232 41.4
FvH4_3g22540 Fragaria vesca HOM05D005753 ORTHO05D007034 1.5e-23 114.0 231 38.5
DCAR_022557 Daucus carota HOM05D005753 ORTHO05D007034 2.6e-23 113.2 234 41.0
FAN11G3996 Fragaria x ananassa HOM05D005753 ORTHO05D007034 5.8e-23 112.1 231 38.1
FAN25G0533 Fragaria x ananassa HOM05D005753 ORTHO05D007034 5.8e-23 112.1 231 38.1
TWI38G0917 Tripterygium wilfordii HOM05D005753 ORTHO05D007034 3.8e-22 109.4 244 37.3
Sabra11G0124200 Salix brachista HOM05D005753 ORTHO05D007034 6.4e-22 108.6 268 36.9
FAN21G2493 Fragaria x ananassa HOM05D005753 ORTHO05D007034 4.2e-21 105.9 231 37.2
MELO3C025386.2 Cucumis melo HOM05D005753 ORTHO05D007034 1.6e-20 104.0 154 45.5
Cpa.g.sc97.11 Carica papaya HOM05D005753 ORTHO05D007034 3.5e-20 102.8 88 61.4
Cc05_g13740 Coffea canephora HOM05D005753 ORTHO05D007034 3.5e-20 102.8 232 40.1
ClCG10G005460 Citrullus lanatus HOM05D005753 ORTHO05D007034 4.6e-20 102.4 231 39.8
CsaV3_3G005190 Cucumis sativus L. HOM05D005753 ORTHO05D007034 4.6e-20 102.4 156 46.8
Sabra16G0289400 Salix brachista HOM05D005753 ORTHO05D007034 4.6e-20 102.4 240 35.4
Prupe.4G211900 Prunus persica HOM05D005753 ORTHO05D007034 1.0e-19 101.3 238 37.0
Glyma.18G099000 Glycine max HOM05D005753 ORTHO05D007034 1.3e-19 100.9 228 38.2
CiPaw.11G188600 Carya illinoinensis HOM05D005753 ORTHO05D007034 6.7e-19 98.6 93 55.9
ECA236G0832 Erigeron canadensis HOM05D005753 ORTHO05D007034 6.7e-19 98.6 111 50.5
Sed0020363 Sechium edule HOM05D005753 ORTHO05D007034 8.7e-19 98.2 213 37.1
Lalb_Chr15g0081011 Lupinus albus HOM05D005753 ORTHO05D007034 1.1e-18 97.8 227 36.6
Phvul.006G042100 Phaseolus vulgaris HOM05D005753 ORTHO05D007034 2.5e-18 96.7 225 38.2
Aqoxy4G01822 Aquilegia oxysepala HOM05D005753 ORTHO05D007034 4.3e-18 95.9 232 36.2
Lsat_1_v5_gn_7_108641 Lactuca sativa HOM05D005753 ORTHO05D007034 4.3e-18 95.9 139 46.8
Eucgr.F00770 Eucalyptus grandis HOM05D005753 ORTHO05D007034 2.8e-17 93.2 220 35.0
TWI38G1056 Tripterygium wilfordii HOM05D005753 ORTHO05D007034 2.8e-17 93.2 242 35.5
Ca_14723_v3 Cicer arietinum L. HOM05D005753 ORTHO05D007034 3.7e-17 92.8 240 36.2
MBI02_g22112_MAGBIO Magnolia biondii HOM05D005753 ORTHO05D007034 8.2e-17 91.7 191 35.1
Sc07g0002780 Simmondsia chinensis HOM05D005753 ORTHO05D007034 1.4e-16 90.9 221 35.7
arahy.Tifrunner.gnm1.ann1.F03U7D Arachis hypogaea HOM05D005753 ORTHO05D007034 3.1e-16 89.7 229 34.5
Migut.M01771 Erythranthe guttata HOM05D005753 ORTHO05D007034 5.3e-16 89.0 179 38.0
Psat0s6641g0040 Pisum sativum HOM05D005753 ORTHO05D007034 6.9e-16 88.6 148 44.6
arahy.Tifrunner.gnm1.ann1.2B36BL Arachis hypogaea HOM05D005753 ORTHO05D007034 1.5e-15 87.4 229 34.5
EL10Ac4g07817 Beta vulgaris HOM05D005753 ORTHO05D007034 1.5e-15 87.4 194 38.1
MSTRG.15152 Avicennia marina HOM05D005753 ORTHO05D007034 2.0e-15 87.0 204 32.4
Glyma.08G315100 Glycine max HOM05D005753 ORTHO05D007034 3.4e-15 86.3 225 36.9
HanXRQChr15g0494351 Helianthus annuus HOM05D005753 ORTHO05D007034 1.0e-14 84.7 101 54.5
Ah.06g186160 Amaranthus hybridus HOM05D005753 ORTHO05D007034 1.3e-14 84.3 90 52.2
Carub.0007s1385 Capsella rubella HOM05D005753 ORTHO05D007034 1.3e-14 84.3 200 33.5
Psat5g180520 Pisum sativum HOM05D005753 ORTHO05D007034 1.7e-14 84.0 245 31.8
CANSAT78G0206 Cannabis sativa HOM05D005753 ORTHO05D007034 2.9e-14 83.2 200 35.0
AUR62015759 Chenopodium quinoa HOM05D005753 ORTHO05D007034 2.9e-14 83.2 193 38.9
Psat1g183360 Pisum sativum HOM05D005753 ORTHO05D007034 2.9e-14 83.2 102 47.1
AUR62020456 Chenopodium quinoa HOM05D005753 ORTHO05D007034 6.5e-14 82.0 192 38.0
Lj6g0004879 Lotus japonicus HOM05D005753 ORTHO05D007034 1.9e-13 80.5 221 32.6
PSO210G3457 Papaver somniferum HOM05D005753 ORTHO05D007034 1.9e-13 80.5 208 33.7
AT4G26990 Arabidopsis thaliana HOM05D005753 ORTHO05D007034 3.2e-13 79.7 195 32.3
PSO832G3698 Papaver somniferum HOM05D005753 ORTHO05D007034 3.2e-13 79.7 208 33.2
AT5G54920 Arabidopsis thaliana HOM05D005753 ORTHO05D007034 4.2e-13 79.3 187 30.5
BcaNung03572 Brassica carinata HOM05D005753 ORTHO05D007034 1.2e-12 77.8 206 32.0
Medtr3g051270 Medicago truncatula HOM05D005753 ORTHO05D007034 6.0e-12 75.5 258 30.6
A01p18150 Brassica napus HOM05D005753 ORTHO05D007034 1.0e-11 74.7 183 33.9
BraA01t01770Z Brassica rapa HOM05D005753 ORTHO05D007034 1.0e-11 74.7 183 33.9
ATR0752G139 Amborella trichopoda HOM05D005753 ORTHO05D007034 1.3e-11 74.3 141 34.8
CARHR234600 Cardamine hirsuta HOM05D005753 ORTHO05D007034 2.3e-11 73.6 182 31.3
Sp7g24940 Schrenkiella parvula HOM05D005753 ORTHO05D007034 3.9e-11 72.8 248 28.2
AL8G30390 Arabidopsis lyrata HOM05D005753 ORTHO05D007034 1.1e-10 71.2 234 30.3
Carub.0008s1522 Capsella rubella HOM05D005753 ORTHO05D007034 1.5e-10 70.9 188 31.4
Thhalv10025144m.g Eutrema salsugineum HOM05D005753 ORTHO05D007034 3.3e-10 69.7 207 27.5
BcaC06g32718 Brassica carinata HOM05D005753 ORTHO05D007034 7.4e-10 68.6 206 29.6
BolC1t02245H Brassica oleracea HOM05D005753 ORTHO05D007034 1.6e-09 67.4 183 32.2
THA.LOC104818102 Tarenaya hassleriana HOM05D005753 ORTHO05D007034 1.6e-09 67.4 200 33.0
CARHR268260 Cardamine hirsuta HOM05D005753 ORTHO05D007034 2.2e-09 67.0 184 31.5
A03p57000 Brassica napus HOM05D005753 ORTHO05D007034 6.3e-09 65.5 219 28.3
TPR.G16572 Trifolium pratense HOM05D005753 ORTHO05D007034 6.3e-09 65.5 268 29.5
C01p23110 Brassica napus HOM05D005753 ORTHO05D007034 1.4e-08 64.3 185 32.4
PGR083G0792 Punica granatum HOM05D005753 ORTHO05D007034 1.4e-08 64.3 218 31.2
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 4.1e-08 62.8 219 27.9
AL7G25840 Arabidopsis lyrata HOM05D005753 ORTHO05D007034 9.0e-08 61.6 197 29.4
Aa31LG5G10420 Aethionema arabicum HOM05D005753 ORTHO05D007034 1.5e-07 60.8 186 30.6
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 2.0e-07 60.5 194 29.4
Duzib170G0684 Durio zibethinus HOM05D005753 ORTHO05D007034 3.4e-07 59.7 64 48.4
Psat1g117840 Pisum sativum HOM05D005753 ORTHO05D007034 4.5e-07 59.3 140 38.6
HanXRQChr16g0515041 Helianthus annuus HOM05D005753 ORTHO05D007034 5.9e-07 58.9 77 42.9
Hund02053 Selenicereus undatus HOM05D005753 ORTHO05D007034 1.0e-06 58.2 223 30.5


User provided reference genes

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