Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013582 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 5.2e-40 167.2 79 100.0
CSS0039859 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 9.6e-10 66.6 38 81.6
CSS0010985 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 1.6e-09 65.9 38 81.6
CSS0016703 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 1.6e-09 65.9 38 81.6
Actinidia33452 Actinidia chinensis HOM05D003518 ORTHO05D005164 4.8e-09 64.3 38 76.3
CSS0048282 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 6.2e-09 63.9 41 73.2
Hma1.2p1_0132F.1_g060640 Hydrangea macrophylla HOM05D003518 ORTHO05D005164 1.4e-08 62.8 37 81.1
TWI59G1247 Tripterygium wilfordii HOM05D003518 ORTHO05D005164 1.4e-08 62.8 38 71.1
Lalb_Chr04g0256591 Lupinus albus HOM05D003518 ORTHO05D005164 2.4e-08 62.0 37 75.7
CSS0037508 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 3.1e-08 61.6 38 76.3
CSS0043694 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 3.1e-08 61.6 38 76.3
Dinv32408 Davidia involucrata HOM05D003518 ORTHO05D005164 3.1e-08 61.6 37 78.4
ECA236G3950 Erigeron canadensis HOM05D003518 ORTHO05D005164 3.1e-08 61.6 40 72.5
Dinv43741 Davidia involucrata HOM05D003518 ORTHO05D005164 5.3e-08 60.8 37 78.4
FAN03G3110 Fragaria x ananassa HOM05D003518 ORTHO05D005164 5.3e-08 60.8 76 51.3
vmacro20980 Vaccinium macrocarpon HOM05D003518 ORTHO05D005164 5.3e-08 60.8 38 71.1
Duzib133G1143 Durio zibethinus HOM05D003518 ORTHO05D005164 6.9e-08 60.5 37 73.0
PSO478G4904 Papaver somniferum HOM05D003518 ORTHO05D005164 9.0e-08 60.1 37 64.9
Nn1g01294 Nelumbo nucifera HOM05D003518 ORTHO05D005164 1.5e-07 59.3 44 63.6
Prupe.2G151300 Prunus persica HOM05D003518 ORTHO05D005164 1.5e-07 59.3 37 73.0
Lalb_Chr17g0340051 Lupinus albus HOM05D003518 ORTHO05D005164 2.0e-07 58.9 37 70.3
RcHm_v2.0_Chr1g0351731 Rosa chinensis HOM05D003518 ORTHO05D005164 2.0e-07 58.9 37 78.4
GSVIVG01027580001 Vitis vinifera HOM05D003518 ORTHO05D005164 2.0e-07 58.9 37 73.0
FAN10G3827 Fragaria x ananassa HOM05D003518 ORTHO05D005164 2.6e-07 58.5 38 73.7
QL08p051054 Quercus lobata HOM05D003518 ORTHO05D005164 2.6e-07 58.5 36 75.0
ClCG05G001980 Citrullus lanatus HOM05D003518 ORTHO05D005164 3.4e-07 58.2 37 75.7
Lsat_1_v5_gn_7_6740 Lactuca sativa HOM05D003518 ORTHO05D005164 3.4e-07 58.2 37 75.7
Rhsim07G0023000 Rhododendron simsii HOM05D003518 ORTHO05D005164 3.4e-07 58.2 38 68.4
FvH4_7g12710 Fragaria vesca HOM05D003518 ORTHO05D005164 4.5e-07 57.8 37 75.7
FAN01G1761 Fragaria x ananassa HOM05D003518 ORTHO05D005164 4.5e-07 57.8 37 75.7
FAN06G1131 Fragaria x ananassa HOM05D003518 ORTHO05D005164 4.5e-07 57.8 37 75.7
FAN06G5121 Fragaria x ananassa HOM05D003518 ORTHO05D005164 4.5e-07 57.8 37 75.7
MD02G1197300 Malus domestica HOM05D003518 ORTHO05D005164 5.8e-07 57.4 37 70.3
PSO782G5439 Papaver somniferum HOM05D003518 ORTHO05D005164 5.8e-07 57.4 37 62.2
ECA234G2542 Erigeron canadensis HOM05D003518 ORTHO05D005164 7.6e-07 57.0 38 76.3
Cc02_g37010 Coffea canephora HOM05D003518 ORTHO05D005164 9.9e-07 56.6 35 77.1
DCAR_006891 Daucus carota HOM05D003518 ORTHO05D005164 9.9e-07 56.6 37 70.3
Manes.01G263400 Manihot esculenta HOM05D003518 ORTHO05D005164 1.3e-06 56.2 37 67.6
TWI14G0835 Tripterygium wilfordii HOM05D003518 ORTHO05D005164 1.3e-06 56.2 38 65.8
Aqoxy7G00493 Aquilegia oxysepala HOM05D003518 ORTHO05D005164 1.7e-06 55.8 37 64.9
FAN10G3707 Fragaria x ananassa HOM05D003518 ORTHO05D005164 1.7e-06 55.8 37 73.0
Rhsim01G0160000 Rhododendron simsii HOM05D003518 ORTHO05D005164 1.7e-06 55.8 38 68.4
Ciclev10019439m.g Citrus clementina HOM05D003518 ORTHO05D005164 2.2e-06 55.5 38 63.2
Ah.05g175810 Amaranthus hybridus HOM05D003518 ORTHO05D005164 2.9e-06 55.1 38 65.8
Potri.002G151800 Populus trichocarpa HOM05D003518 ORTHO05D005164 2.9e-06 55.1 37 67.6
Glyma.07G080800 Glycine max HOM05D003518 ORTHO05D005164 3.8e-06 54.7 37 64.9
arahy.Tifrunner.gnm1.ann1.4HY23M Arachis hypogaea HOM05D003518 ORTHO05D005164 4.9e-06 54.3 37 67.6
CiPaw.02G164700 Carya illinoinensis HOM05D003518 ORTHO05D005164 4.9e-06 54.3 47 51.1
Eucgr.E01329 Eucalyptus grandis HOM05D003518 ORTHO05D005164 4.9e-06 54.3 37 67.6
HanXRQChr06g0169291 Helianthus annuus HOM05D003518 ORTHO05D005164 4.9e-06 54.3 37 67.6
Sed0008201 Sechium edule HOM05D003518 ORTHO05D005164 4.9e-06 54.3 37 67.6
CANSAT56G2265 Cannabis sativa HOM05D003518 ORTHO05D005164 6.4e-06 53.9 38 57.9
Ca_23782_v3 Cicer arietinum L. HOM05D003518 ORTHO05D005164 6.4e-06 53.9 37 64.9
Gohir.A12G102800 Gossypium hirsutum HOM05D003518 ORTHO05D005164 6.4e-06 53.9 37 64.9
Gorai.008G115300 Gossypium raimondii HOM05D003518 ORTHO05D005164 6.4e-06 53.9 37 64.9
HanXRQChr04g0122151 Helianthus annuus HOM05D003518 ORTHO05D005164 6.4e-06 53.9 37 70.3
Haze_16711 Corylus avellana HOM05D003518 ORTHO05D005164 8.4e-06 53.5 35 65.7
MELO3C006158.2 Cucumis melo HOM05D003518 ORTHO05D005164 8.4e-06 53.5 37 67.6


User provided reference genes

Program Settings