Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013580 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.6e-70 267.3 161 100.0
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.2e-69 265.8 161 99.4
CSS0017473 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.2e-69 265.8 161 99.4
CSS0021320 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.2e-69 265.8 161 99.4
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.4e-69 264.2 161 98.8
CSS0050513 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.4e-69 263.8 161 98.8
CSS0004257 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.1e-68 263.5 161 98.8
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-67 260.0 161 98.1
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-67 260.0 161 98.1
CSS0014280 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D024710 2.3e-66 255.8 161 87.0
CSS0023792 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.1e-63 246.9 161 94.4
CSS0038450 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.9e-51 204.1 107 98.1
CSS0010221 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D020238 2.1e-27 126.3 162 54.3
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.9e-22 108.2 160 47.5
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.9e-22 108.2 160 47.5
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.0e-21 105.1 158 41.1
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.5e-20 102.8 158 41.1
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.5e-20 102.8 158 41.1
vmacro13746 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 4.2e-20 102.1 175 40.6
vmacro22863 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 4.2e-20 102.1 175 40.6
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 1.0e-18 97.4 153 39.2
CSS0009093 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.0e-18 95.9 159 49.1
CSS0039293 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.0e-18 95.9 159 49.1
CSS0000195 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.9e-18 95.5 159 49.1
CSS0003077 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.9e-18 95.5 159 49.1
CSS0019281 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.9e-18 95.5 159 49.1
CSS0021750 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.9e-18 95.5 159 49.1
CSS0042573 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.9e-18 95.5 159 49.1
CSS0006274 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.1e-17 94.0 159 49.1
Rhsim04G0125600 Rhododendron simsii HOM05D001576 ORTHO05D000401 4.4e-17 92.0 158 39.2
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 1.7e-16 90.1 166 41.0
CSS0042927 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.2e-16 87.8 160 48.1
CSS0004495 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.1e-15 84.3 159 44.0
SHI25538 Sapria himalayana HOM05D002460 ORTHO05D002716 3.4e-14 82.4 160 38.8
CSS0010831 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.5e-14 82.0 128 56.2
Ciclev10003979m.g Citrus clementina HOM05D001576 ORTHO05D000401 2.9e-13 79.3 159 41.5
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.5e-12 76.3 158 33.5
Ciclev10033751m.g Citrus clementina HOM05D001576 ORTHO05D000401 3.2e-12 75.9 138 37.0
Rhsim12G0116000 Rhododendron simsii HOM05D028291 ORTHO05D020238 9.4e-12 74.3 145 36.6
Rhsim07G0156400 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.2e-11 73.9 154 37.0
TWI74G0871 Tripterygium wilfordii HOM05D025099 ORTHO05D000401 2.1e-11 73.2 165 46.7
Rhsim12G0091400 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.7e-11 72.8 159 39.6
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 3.6e-11 72.4 157 36.9
Ciclev10018206m.g Citrus clementina HOM05D001576 ORTHO05D000401 8.0e-11 71.2 159 44.0
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 1.4e-10 70.5 160 37.5
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.9e-10 68.9 158 34.8
Haze_12994 Corylus avellana HOM05D001576 ORTHO05D000401 6.7e-10 68.2 146 45.2
TWI38G1366 Tripterygium wilfordii HOM05D025099 ORTHO05D000401 3.3e-09 65.9 158 39.9
TWI60G0823 Tripterygium wilfordii HOM05D001576 ORTHO05D010240 1.3e-08 63.9 158 34.2
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.7e-08 63.5 158 33.5
CiPaw.14G060500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.4e-07 60.5 159 40.9
Haze_08540 Corylus avellana HOM05D058381 ORTHO05D020238 1.8e-07 60.1 157 38.9
TWI31G0938 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 7.0e-07 58.2 148 39.9
CiPaw.02G030800 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.6e-06 57.0 159 38.4
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-06 56.6 159 39.6
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-06 56.6 159 39.6
CiPaw.03G129800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.6e-06 56.2 156 39.7
Rhsim06G0075000 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.6e-06 56.2 116 35.3
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.5e-06 55.8 155 39.4
Rhsim10G0086400 Rhododendron simsii HOM05D028291 ORTHO05D020238 4.5e-06 55.5 125 32.8
Cfa020524 Carpinus fangiana HOM05D020928 ORTHO05D024875 5.9e-06 55.1 155 41.3


User provided reference genes

Program Settings