Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 3.6e-213 744.6 361 100.0
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 3.4e-203 711.4 361 93.9
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 4.4e-203 711.1 361 94.2
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 1.7e-202 709.1 361 93.4
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 4.9e-202 707.6 361 93.1
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 1.4e-201 706.1 361 93.4
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 4.6e-200 701.0 361 92.5
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 7.8e-200 700.3 361 92.5
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 3.0e-199 698.4 358 91.9
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 1.5e-198 696.0 357 92.7
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 7.3e-198 693.7 358 91.3
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 1.3e-197 693.0 361 91.1
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 1.6e-197 692.6 361 92.0
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 2.8e-197 691.8 358 91.6
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 3.6e-197 691.4 361 90.6
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 8.1e-197 690.3 361 90.6
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 2.4e-196 688.7 361 89.5
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 3.1e-196 688.3 361 89.5
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 5.3e-196 687.6 361 89.8
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 5.3e-196 687.6 361 90.6
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 6.9e-196 687.2 371 90.0
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.5e-195 686.0 361 88.6
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 9.9e-195 683.3 361 89.2
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 1.7e-194 682.6 361 90.9
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.7e-194 682.6 357 89.1
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 3.8e-194 681.4 361 90.0
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 6.4e-194 680.6 361 88.6
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 6.4e-194 680.6 361 88.6
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 2.4e-193 678.7 359 88.9
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 2.4e-193 678.7 362 89.8
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 5.4e-193 677.6 359 88.6
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 9.3e-193 676.8 360 90.3
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 9.3e-193 676.8 357 88.2
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 9.3e-193 676.8 358 89.4
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 2.1e-192 675.6 358 89.9
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 2.7e-192 675.2 361 88.4
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 2.7e-192 675.2 361 88.1
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 6.0e-192 674.1 359 88.6
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 2.3e-191 672.2 358 87.4
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 2.3e-191 672.2 361 87.5
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 8.7e-191 670.2 361 87.8
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 1.1e-190 669.8 361 87.5
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 7.3e-190 667.2 361 86.4
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 9.6e-190 666.8 361 85.9
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 1.3e-189 666.4 361 87.8
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 1.3e-189 666.4 361 86.7
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 3.6e-189 664.8 361 87.0
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 4.8e-189 664.5 361 87.0
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 9.0e-188 660.2 359 86.9
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 9.0e-188 660.2 360 87.2
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 9.0e-188 660.2 360 87.2
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 1.2e-187 659.8 361 87.0
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 1.2e-187 659.8 361 86.7
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 1.5e-187 659.4 361 86.1
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 2.0e-187 659.1 360 86.7
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 2.6e-187 658.7 357 86.0
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 1.7e-186 656.0 361 86.1
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 2.2e-186 655.6 360 86.4
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 2.2e-186 655.6 339 90.9
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 3.8e-186 654.8 387 81.9
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 4.9e-186 654.4 360 86.7
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 4.9e-186 654.4 396 80.3
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 1.4e-185 652.9 361 85.3
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.9e-185 652.5 360 86.1
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 2.1e-184 649.0 416 77.4
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 3.5e-184 648.3 359 84.4
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 3.5e-184 648.3 359 84.7
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 2.3e-183 645.6 428 75.2
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 3.0e-183 645.2 359 83.6
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 3.9e-183 644.8 358 84.4
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 2.5e-182 642.1 359 83.3
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 3.3e-182 641.7 400 77.8
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 4.3e-182 641.3 361 83.4
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 8.1e-181 637.1 359 82.7
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 8.1e-181 637.1 359 82.7
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 8.1e-181 637.1 359 82.7
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 1.1e-180 636.7 359 82.5
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 1.1e-180 636.7 359 82.7
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 4.0e-180 634.8 357 83.8
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 5.3e-180 634.4 357 82.9
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.2e-179 633.3 360 84.7
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 1.5e-179 632.9 359 81.9
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 1.0e-178 630.2 387 77.3
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 3.8e-178 628.2 358 82.1
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 2.1e-176 622.5 357 82.4
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 3.5e-176 621.7 359 81.6
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 1.3e-175 619.8 359 81.3
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 1.8e-175 619.4 359 81.3
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 3.0e-175 618.6 361 80.9
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 8.7e-175 617.1 361 80.6
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 4.8e-173 611.3 366 77.3
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 2.4e-172 609.0 360 80.8
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 9.0e-172 607.1 366 76.5
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 4.5e-171 604.7 313 92.3
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 1.3e-165 586.6 357 77.0
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 3.7e-165 585.1 361 78.9
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 4.8e-165 584.7 302 92.7
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 1.9e-161 572.8 336 80.4
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 3.7e-157 558.5 312 85.9
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 1.4e-156 556.6 306 86.9
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 9.1e-156 553.9 403 70.2
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 1.6e-147 526.6 357 70.9
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 3.8e-146 521.9 352 74.1
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 1.6e-144 516.5 357 68.6
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 3.3e-142 508.8 357 67.2
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 2.4e-140 502.7 358 68.2
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 2.8e-133 479.2 361 68.7
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 3.7e-133 478.8 364 67.0
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 6.5e-130 468.0 242 93.4
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 8.5e-130 467.6 252 89.3
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 1.1e-129 467.2 368 62.2
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 4.1e-116 422.2 211 93.8
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 7.8e-115 417.9 242 82.6
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 3.1e-103 379.4 205 87.8
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 1.3e-77 294.3 180 81.1
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.8e-71 273.9 152 80.9
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 8.7e-66 255.0 154 76.6
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 2.0e-62 243.8 119 91.6
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 8.7e-58 228.4 126 82.5
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 2.8e-48 196.8 207 53.6
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 1.8e-47 194.1 326 37.7
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 1.7e-37 161.0 98 80.6
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 7.9e-35 152.1 117 67.5
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 6.7e-26 122.5 59 93.2
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 6.7e-26 122.5 111 59.5
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 2.1e-19 100.9 79 67.1
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 1.1e-15 88.6 51 72.5
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 1.6e-14 84.7 37 97.3
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 4.5e-14 83.2 162 37.0
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 2.0e-09 67.8 247 27.5


User provided reference genes

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