Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 2.3e-168 595.5 304 100.0
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 1.8e-128 463.0 334 74.3
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 3.5e-124 448.7 332 71.4
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 2.2e-123 446.0 345 70.1
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 2.1e-121 439.5 335 69.6
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 1.5e-119 433.3 284 76.1
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 1.5e-119 433.3 367 64.9
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 5.7e-119 431.4 341 68.0
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 6.3e-118 427.9 260 81.2
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 1.1e-117 427.2 332 69.0
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 3.5e-116 422.2 339 67.0
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 3.5e-116 422.2 284 74.6
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 7.7e-116 421.0 333 67.0
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 1.0e-115 420.6 336 65.8
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 3.8e-115 418.7 257 82.1
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 5.0e-115 418.3 336 65.8
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 8.5e-115 417.5 338 68.0
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 1.1e-114 417.2 334 67.4
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 1.5e-114 416.8 335 66.3
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 1.5e-114 416.8 266 77.1
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 3.2e-114 415.6 261 77.4
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 4.2e-114 415.2 325 68.9
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 4.2e-114 415.2 295 71.9
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 5.5e-114 414.8 335 65.7
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 1.2e-113 413.7 261 77.8
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 3.6e-113 412.1 326 66.6
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 4.7e-113 411.8 285 71.9
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 8.0e-113 411.0 338 66.6
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 8.0e-113 411.0 332 66.6
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 1.0e-112 410.6 336 64.3
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 1.0e-112 410.6 336 64.3
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 1.0e-112 410.6 262 76.7
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 1.8e-112 409.8 333 67.6
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 2.3e-112 409.5 262 76.3
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 6.8e-112 407.9 262 76.3
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 6.8e-112 407.9 262 76.3
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 1.2e-111 407.1 262 76.3
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 1.5e-111 406.8 335 64.5
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 2.0e-111 406.4 336 63.4
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 3.4e-111 405.6 263 77.9
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 5.7e-111 404.8 259 76.1
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 1.3e-110 403.7 262 74.4
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 8.3e-110 401.0 349 64.5
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 1.8e-109 399.8 331 62.8
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 1.8e-109 399.8 336 64.3
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 9.1e-109 397.5 333 62.5
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 2.7e-108 396.0 331 65.6
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 2.7e-108 396.0 264 74.2
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 5.9e-108 394.8 340 63.8
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 1.3e-107 393.7 272 72.1
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 1.3e-107 393.7 301 68.1
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 2.9e-107 392.5 296 70.9
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 5.0e-107 391.7 329 64.7
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 6.6e-107 391.3 272 72.8
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 1.1e-106 390.6 325 64.0
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 1.9e-106 389.8 255 76.5
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 1.9e-106 389.8 258 75.6
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 2.5e-106 389.4 256 75.8
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 2.5e-106 389.4 256 75.8
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 3.3e-106 389.0 258 75.6
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 4.2e-106 388.7 336 62.5
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 7.2e-106 387.9 255 76.1
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.6e-105 386.7 338 64.5
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 2.8e-105 386.0 263 73.8
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 3.6e-105 385.6 256 75.8
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 3.6e-105 385.6 264 74.6
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 6.1e-105 384.8 256 75.4
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 6.1e-105 384.8 264 73.9
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 1.0e-104 384.0 330 62.4
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 1.4e-104 383.6 261 72.8
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 1.8e-104 383.3 262 71.4
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 4.0e-104 382.1 260 75.4
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 6.8e-104 381.3 260 75.4
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 1.2e-103 380.6 260 75.0
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 9.8e-103 377.5 269 71.7
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 3.7e-102 375.6 336 60.4
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 1.6e-100 370.2 355 57.7
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 2.0e-100 369.8 366 57.4
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 1.1e-98 364.0 285 66.3
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 1.9e-98 363.2 307 63.5
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 1.2e-97 360.5 239 73.6
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 3.6e-97 359.0 280 65.0
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 5.2e-96 355.1 334 58.1
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 1.5e-95 353.6 278 70.5
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 2.0e-95 353.2 336 58.3
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 7.5e-95 351.3 286 66.8
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 2.2e-94 349.7 266 66.2
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 8.3e-94 347.8 312 61.5
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 1.1e-93 347.4 260 70.4
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 6.6e-91 338.2 268 65.3
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 3.6e-89 332.4 250 65.6
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 4.7e-89 332.0 214 86.9
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 1.2e-87 327.4 212 77.8
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 4.9e-86 322.0 237 71.7
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 8.3e-86 321.2 254 61.0
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 1.4e-80 303.9 254 59.4
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 3.1e-80 302.8 273 63.0
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 8.9e-80 301.2 240 70.8
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 1.2e-79 300.8 213 74.2
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 1.7e-78 297.0 262 55.7
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 2.2e-78 296.6 258 60.5
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 1.1e-74 284.3 265 59.2
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 1.2e-73 280.8 198 71.7
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 4.3e-66 255.8 176 72.7
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 3.1e-64 249.6 255 49.8
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 5.8e-63 245.4 158 77.2
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.4e-61 240.7 230 60.0
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 1.0e-59 234.6 216 54.6
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 4.6e-52 209.1 147 75.5
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 2.1e-49 200.3 148 72.3
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 1.4e-48 197.6 148 71.6
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 2.7e-44 183.3 146 67.1
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 1.1e-42 177.9 261 38.7
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 7.4e-42 175.3 277 39.7
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 5.5e-37 159.1 126 70.6
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 1.6e-20 104.4 88 59.1
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 1.0e-19 101.7 209 32.5
Os01g0764500 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 2.2e-14 84.0 64 59.4
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 4.8e-09 66.2 37 73.0
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 7.0e-08 62.4 98 39.8
Cfa025736 Carpinus fangiana HOM05D020303 ORTHO05D021299 6.5e-06 55.8 70 37.1


User provided reference genes

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