Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 2.4e-176 622.1 323 100.0
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.5e-170 602.8 346 93.1
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 7.9e-135 484.2 320 79.4
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 8.2e-132 474.2 320 77.8
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 2.6e-122 442.6 337 70.0
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 4.5e-122 441.8 319 71.5
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 1.0e-121 440.7 320 71.2
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 9.4e-120 434.1 319 69.0
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 2.7e-119 432.6 320 71.6
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 2.7e-119 432.6 320 68.8
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 7.9e-119 431.0 320 70.6
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 1.4e-118 430.3 320 68.8
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 6.7e-118 427.9 320 70.0
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 6.7e-118 427.9 322 68.3
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 8.8e-118 427.6 320 70.3
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 1.5e-117 426.8 323 70.9
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.5e-117 426.8 320 70.9
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 2.6e-117 426.0 319 69.6
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 3.3e-117 425.6 320 70.0
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 3.3e-117 425.6 319 70.2
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 4.4e-117 425.2 321 67.3
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 5.7e-117 424.9 318 67.6
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 5.7e-117 424.9 321 67.0
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 5.7e-117 424.9 316 68.7
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 7.4e-117 424.5 320 69.4
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 2.2e-116 422.9 319 69.9
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 2.2e-116 422.9 321 67.0
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 1.1e-115 420.6 326 66.9
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 1.4e-115 420.2 320 69.1
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 1.8e-115 419.9 318 68.6
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 1.8e-115 419.9 321 67.3
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 1.8e-115 419.9 320 67.5
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 2.4e-115 419.5 320 68.8
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 3.1e-115 419.1 320 68.4
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 3.1e-115 419.1 318 70.8
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 4.1e-115 418.7 319 66.5
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 6.9e-115 417.9 327 67.3
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.2e-114 417.2 320 67.8
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 1.2e-114 417.2 318 66.7
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 2.0e-114 416.4 318 68.9
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 2.6e-114 416.0 317 69.1
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 2.6e-114 416.0 300 70.3
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 1.0e-113 414.1 320 67.2
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 1.0e-113 414.1 302 70.5
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 2.2e-113 412.9 316 67.1
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 2.2e-113 412.9 331 65.6
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 3.8e-113 412.1 318 68.9
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 5.0e-113 411.8 321 66.0
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 5.0e-113 411.8 316 69.0
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 8.5e-113 411.0 318 66.4
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 8.5e-113 411.0 318 66.4
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 8.5e-113 411.0 320 65.6
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 1.1e-112 410.6 318 66.4
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 1.1e-112 410.6 301 70.1
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 1.4e-112 410.2 320 65.3
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 2.5e-112 409.5 301 72.4
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 4.2e-112 408.7 320 67.8
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 4.2e-112 408.7 318 65.7
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 5.5e-112 408.3 318 65.4
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 7.2e-112 407.9 318 65.7
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.4e-110 403.7 302 67.9
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 1.8e-110 403.3 324 64.8
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.3e-110 402.9 299 68.2
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 3.0e-110 402.5 322 64.6
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 3.9e-110 402.1 367 59.9
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 6.7e-110 401.4 301 67.8
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 2.2e-108 396.4 340 62.1
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 4.8e-108 395.2 320 66.9
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 6.3e-108 394.8 301 70.8
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 1.4e-107 393.7 301 68.4
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 1.8e-107 393.3 320 67.5
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 4.1e-107 392.1 301 66.4
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.6e-106 390.2 299 68.9
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 2.6e-106 389.4 296 67.9
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 5.0e-105 385.2 319 63.6
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 3.0e-102 375.9 286 69.2
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 3.0e-102 375.9 320 63.1
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 5.7e-101 371.7 300 64.3
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 3.1e-99 365.9 271 68.6
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.5e-96 357.1 301 63.5
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 9.4e-96 354.4 320 61.6
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 1.3e-92 344.0 341 57.8
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 7.7e-90 334.7 317 59.3
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 3.8e-89 332.4 232 72.8
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 3.4e-85 319.3 257 66.5
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 5.4e-83 312.0 209 74.2
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 1.6e-82 310.5 266 63.9
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 1.6e-82 310.5 266 63.9
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 2.7e-82 309.7 317 56.5
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 2.9e-81 306.2 324 50.6
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 8.6e-81 304.7 213 70.4
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 6.1e-79 298.5 253 66.0
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 5.7e-77 292.0 317 48.6
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 1.1e-75 287.7 193 72.0
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 3.0e-73 279.6 317 46.7
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 1.2e-71 274.2 213 66.7
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 2.1e-71 273.5 181 75.7
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 4.7e-71 272.3 317 45.7
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 2.6e-69 266.5 320 48.8
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 1.1e-67 261.2 334 49.1
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 5.8e-61 238.8 213 58.7
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 1.4e-59 234.2 306 41.2
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 1.0e-57 228.0 270 48.1
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 1.0e-49 201.4 316 38.6
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 5.4e-43 179.1 230 47.4
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 1.7e-41 174.1 148 60.8
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 3.2e-35 153.3 103 72.8
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 1.6e-31 141.0 129 55.8
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 9.0e-30 135.2 131 55.7
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 5.1e-25 119.4 70 85.7
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 6.7e-25 119.0 152 48.7
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.2e-21 108.2 98 58.2
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 2.7e-18 97.1 188 35.6
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 2.7e-18 97.1 80 63.8
CSS0046000 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D004872 3.6e-10 70.1 44 77.3
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.0e-09 68.6 72 50.0


User provided reference genes

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