Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013534 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D009843 2.8e-88 328.6 162 100.0
Potri.013G142336 Populus trichocarpa HOM05D000388 ORTHO05D009843 9.7e-33 144.1 89 87.6
TAR629G1277 Trochodendron aralioides HOM05D000388 ORTHO05D009843 1.7e-32 143.3 79 93.7
RcHm_v2.0_CPg0502271 Rosa chinensis HOM05D000388 ORTHO05D009843 2.8e-32 142.5 79 92.4
Migut.D01348 Erythranthe guttata HOM05D000388 ORTHO05D009843 3.7e-32 142.1 79 92.4
Migut.J01359 Erythranthe guttata HOM05D000388 ORTHO05D009843 3.7e-32 142.1 79 92.4
HanXRQChr00c0272g0573001 Helianthus annuus HOM05D000388 ORTHO05D009843 6.3e-32 141.4 79 91.1
HanXRQChr00c0439g0574751 Helianthus annuus HOM05D000388 ORTHO05D009843 6.3e-32 141.4 79 91.1
HanXRQChr02g0041691 Helianthus annuus HOM05D000388 ORTHO05D009843 6.3e-32 141.4 79 91.1
HanXRQChr04g0099341 Helianthus annuus HOM05D000388 ORTHO05D009843 6.3e-32 141.4 79 91.1
HanXRQChr05g0151391 Helianthus annuus HOM05D000388 ORTHO05D009843 6.3e-32 141.4 79 91.1
HanXRQChr07g0201051 Helianthus annuus HOM05D000388 ORTHO05D009843 6.3e-32 141.4 79 91.1
HanXRQChr08g0210251 Helianthus annuus HOM05D000388 ORTHO05D009843 6.3e-32 141.4 79 91.1
HanXRQChr10g0282451 Helianthus annuus HOM05D000388 ORTHO05D009843 6.3e-32 141.4 79 91.1
HanXRQChr11g0326691 Helianthus annuus HOM05D000388 ORTHO05D009843 6.3e-32 141.4 79 91.1
HanXRQCPg0579911 Helianthus annuus HOM05D000388 ORTHO05D009843 6.3e-32 141.4 79 91.1
Hma1.2p1_0051F.1_g029490 Hydrangea macrophylla HOM05D000388 ORTHO05D009843 8.2e-32 141.0 79 92.4
RcHm_v2.0_Chr3g0491801 Rosa chinensis HOM05D000388 ORTHO05D009843 8.2e-32 141.0 79 91.1
Nitab4.5_0025922g0010 Nicotiana tabacum HOM05D000388 ORTHO05D009843 4.1e-31 138.7 79 91.1
Lalb_Chr23g0270511 Lupinus albus HOM05D000388 ORTHO05D009843 5.3e-31 138.3 79 91.1
Nn020s41509 Nelumbo nucifera HOM05D000388 ORTHO05D009843 5.3e-31 138.3 79 91.1
Nn055s41931 Nelumbo nucifera HOM05D000388 ORTHO05D009843 5.3e-31 138.3 79 91.1
Nn082s42681 Nelumbo nucifera HOM05D000388 ORTHO05D009843 5.3e-31 138.3 79 91.1
Nn287s46145 Nelumbo nucifera HOM05D000388 ORTHO05D009843 5.3e-31 138.3 79 91.1
Sed0009296 Sechium edule HOM05D000388 ORTHO05D009843 5.3e-31 138.3 79 89.9
Sed0020360 Sechium edule HOM05D000388 ORTHO05D009843 5.3e-31 138.3 79 89.9
LjContig00318g0006350 Lotus japonicus HOM05D000388 ORTHO05D009843 9.1e-31 137.5 79 89.9
AL2G20790 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 1.2e-30 137.1 79 87.3
ATCG00330 Arabidopsis thaliana HOM05D000388 ORTHO05D009843 1.2e-30 137.1 79 87.3
BcaC04g20699 Brassica carinata HOM05D000388 ORTHO05D009843 1.2e-30 137.1 79 87.3
Gohir.D08G129080 Gossypium hirsutum HOM05D000388 ORTHO05D009843 2.0e-30 136.3 79 88.6
Nitab4.5_0007186g0040 Nicotiana tabacum HOM05D000388 ORTHO05D009843 2.0e-30 136.3 79 89.9
CARHR281990 Cardamine hirsuta HOM05D000388 ORTHO05D009843 3.5e-30 135.6 79 86.1
A06p23300 Brassica napus HOM05D000388 ORTHO05D000473 5.9e-30 134.8 79 86.1
BNapus_Darmor_BZH_scaffold_253p00110 Brassica napus HOM05D000388 ORTHO05D009843 5.9e-30 134.8 79 86.1
BNapus_Darmor_BZH_scaffold_287p00030 Brassica napus HOM05D000388 ORTHO05D000473 5.9e-30 134.8 79 86.1
C09p40130 Brassica napus HOM05D000388 ORTHO05D009843 5.9e-30 134.8 79 86.1
BolC7t41727H Brassica oleracea HOM05D000388 ORTHO05D000473 5.9e-30 134.8 79 86.1
BolSC29t60455H Brassica oleracea HOM05D000388 ORTHO05D000473 5.9e-30 134.8 79 86.1
BolSC45t60943H Brassica oleracea HOM05D000388 ORTHO05D000473 5.9e-30 134.8 79 86.1
BolSC46t60990H Brassica oleracea HOM05D000388 ORTHO05D000473 5.9e-30 134.8 79 86.1
BraSC140t45581Z Brassica rapa HOM05D000388 ORTHO05D000473 5.9e-30 134.8 79 86.1
BraSC151t45706Z Brassica rapa HOM05D000388 ORTHO05D009843 5.9e-30 134.8 79 86.1
BraSC179t45796Z Brassica rapa HOM05D000388 ORTHO05D000473 5.9e-30 134.8 79 86.1
Gohir.A03G019500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 5.9e-30 134.8 79 88.6
PGR111G0009 Punica granatum HOM05D000388 ORTHO05D009843 5.9e-30 134.8 79 88.6
Solyc00g500055.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 5.9e-30 134.8 79 89.9
Solyc00g500137.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 5.9e-30 134.8 79 89.9
Solyc00g500207.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 5.9e-30 134.8 79 89.9
arahy.Tifrunner.gnm1.ann1.6B1C4L Arachis hypogaea HOM05D000388 ORTHO05D009843 1.0e-29 134.0 79 88.6
BolC9t56909H Brassica oleracea HOM05D000388 ORTHO05D009843 1.0e-29 134.0 79 86.1
CAN.G142.10 Capsicum annuum HOM05D000388 ORTHO05D009843 1.3e-29 133.7 79 88.6
CAN.G500.81 Capsicum annuum HOM05D000388 ORTHO05D009843 1.3e-29 133.7 79 88.6
CAN.G653.5 Capsicum annuum HOM05D000388 ORTHO05D009843 1.3e-29 133.7 79 88.6
DCAR_032482 Daucus carota HOM05D000388 ORTHO05D009843 1.3e-29 133.7 79 87.3
Gohir.A05G086166 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.3e-29 133.7 79 87.3
AL2G21360 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 1.7e-29 133.3 79 84.8
Thhalv10011029m.g Eutrema salsugineum HOM05D000388 ORTHO05D009843 3.8e-29 132.1 79 86.1
TWI15G0535 Tripterygium wilfordii HOM05D000388 ORTHO05D009843 6.5e-29 131.3 79 84.8
PSO548G0009 Papaver somniferum HOM05D000388 ORTHO05D009843 8.5e-29 131.0 79 86.1
Peaxi162Scf00455g00046 Petunia axillaris HOM05D000388 ORTHO05D009843 7.2e-28 127.9 76 86.8
Gohir.A01G140300 Gossypium hirsutum HOM05D000388 ORTHO05D009843 3.6e-27 125.6 79 81.0
Medtr3g035610 Medicago truncatula HOM05D000388 ORTHO05D009843 4.7e-27 125.2 79 82.3
Gohir.D09G055500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 6.1e-27 124.8 80 80.0
Oeu062844.1 Olea europaea HOM05D000388 ORTHO05D009843 6.1e-27 124.8 79 82.3
CiPaw.10G111400 Carya illinoinensis HOM05D000388 ORTHO05D009843 1.8e-26 123.2 66 92.4
EL10Ac1g02280 Beta vulgaris HOM05D000388 ORTHO05D009843 5.2e-26 121.7 79 84.8
Gohir.A01G164720 Gossypium hirsutum HOM05D000388 ORTHO05D009843 4.4e-25 118.6 77 83.1
CAN.G679.7 Capsicum annuum HOM05D000388 ORTHO05D009843 1.3e-24 117.1 79 79.7
Sed0021792 Sechium edule HOM05D000388 ORTHO05D009843 1.3e-24 117.1 79 78.5
Gohir.A07G155821 Gossypium hirsutum HOM05D000388 ORTHO05D009843 3.7e-24 115.5 72 83.3
EL10As15g24141 Beta vulgaris HOM05D000388 ORTHO05D009843 1.8e-23 113.2 111 62.2
Eucgr.C02020 Eucalyptus grandis HOM05D000388 ORTHO05D009843 3.1e-23 112.5 71 81.7
LjContig00489g0027265 Lotus japonicus HOM05D000388 ORTHO05D009843 4.1e-23 112.1 71 80.3
Oeu017222.1 Olea europaea HOM05D000388 ORTHO05D009843 1.6e-22 110.2 79 74.7
SEGI_01256 Sequoiadendron giganteum HOM05D000388 ORTHO05D009843 2.0e-22 109.8 79 73.4
BolSC44t60854H Brassica oleracea HOM05D000388 ORTHO05D009843 1.7e-21 106.7 79 69.6
Nitab4.5_0002607g0050 Nicotiana tabacum HOM05D000388 ORTHO05D009843 1.2e-19 100.5 62 87.1
HanXRQChr16g0506261 Helianthus annuus HOM05D000388 ORTHO05D009843 2.7e-19 99.4 57 91.2
BraSC143t45651Z Brassica rapa HOM05D004182 ORTHO05D007321 8.0e-19 97.8 102 52.0
Peaxi162Scf00575g00006 Petunia axillaris HOM05D000388 ORTHO05D009843 4.0e-18 95.5 50 90.0
Sopen02g009080 Solanum pennellii HOM05D004182 ORTHO05D007321 4.0e-18 95.5 43 97.7
CAN.G386.18 Capsicum annuum HOM05D000388 ORTHO05D000473 4.4e-17 92.0 52 86.5
SEGI_31611 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 9.8e-17 90.9 43 93.0
arahy.Tifrunner.gnm1.ann1.FC7Y3W Arachis hypogaea HOM05D000388 ORTHO05D009843 1.3e-16 90.5 77 66.2
SEGI_13516 Sequoiadendron giganteum HOM05D004182 ORTHO05D007321 1.3e-16 90.5 42 95.2
Hund28396 Selenicereus undatus HOM05D000388 ORTHO05D009843 4.8e-16 88.6 52 86.5
SMO086G0040 Selaginella moellendorffii HOM05D000388 ORTHO05D009843 8.3e-16 87.8 77 59.7
SEGI_24666 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 7.0e-15 84.7 43 88.4
Hund29903 Selenicereus undatus HOM05D000388 ORTHO05D009843 5.0e-13 78.6 51 86.3
EL10As15g24133 Beta vulgaris HOM05D004182 ORTHO05D007321 7.2e-12 74.7 35 94.3
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.6e-11 73.6 35 94.3
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 2.7e-11 72.8 34 94.1
C09p40270 Brassica napus HOM05D004182 ORTHO05D007321 2.7e-11 72.8 34 94.1
BolSC29t60540H Brassica oleracea HOM05D004182 ORTHO05D007321 2.7e-11 72.8 34 94.1
BolSC29t60554H Brassica oleracea HOM05D004182 ORTHO05D007321 2.7e-11 72.8 34 94.1
BolSC35t60684H Brassica oleracea HOM05D004182 ORTHO05D007321 2.7e-11 72.8 34 94.1
BolSC35t60712H Brassica oleracea HOM05D004182 ORTHO05D007321 2.7e-11 72.8 34 94.1
BolSC44t60830H Brassica oleracea HOM05D004182 ORTHO05D007321 2.7e-11 72.8 34 94.1
BolSC45t60917H Brassica oleracea HOM05D004182 ORTHO05D007321 2.7e-11 72.8 34 94.1
BolSC46t60966H Brassica oleracea HOM05D004182 ORTHO05D007321 2.7e-11 72.8 34 94.1
BolSC49t61134H Brassica oleracea HOM05D004182 ORTHO05D007321 2.7e-11 72.8 34 94.1
BraSC103t45421Z Brassica rapa HOM05D004182 ORTHO05D007321 2.7e-11 72.8 34 94.1
BraSC138t45528Z Brassica rapa HOM05D004182 ORTHO05D007321 2.7e-11 72.8 34 94.1
BraSC25t45918Z Brassica rapa HOM05D004182 ORTHO05D007321 2.7e-11 72.8 34 94.1
BraSC58t46465Z Brassica rapa HOM05D004182 ORTHO05D007321 2.7e-11 72.8 34 94.1
BraSC59t46534Z Brassica rapa HOM05D004182 ORTHO05D007321 2.7e-11 72.8 34 94.1
BraSC59t46543Z Brassica rapa HOM05D004182 ORTHO05D007321 2.7e-11 72.8 34 94.1
Medtr8g079770 Medicago truncatula HOM05D000388 ORTHO05D009843 2.7e-11 72.8 51 76.5
HanXRQChr00c0345g0573851 Helianthus annuus HOM05D000388 ORTHO05D009843 3.6e-11 72.4 34 97.1
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 4.7e-11 72.0 66 57.6
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.0e-10 69.3 34 88.2
BolSC49t61151H Brassica oleracea HOM05D004182 ORTHO05D007321 5.2e-10 68.6 31 96.8
Ca_24280_v3 Cicer arietinum L. HOM05D004182 ORTHO05D007321 6.8e-10 68.2 33 90.9
VMungo1080G1108 Vigna mungo HOM05D004182 ORTHO05D007321 1.2e-09 67.4 39 82.1
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 2.0e-09 66.6 34 88.2
Sc09g0006250 Simmondsia chinensis HOM05D002578 ORTHO05D005154 2.6e-09 66.2 34 88.2
FAN26G2239 Fragaria x ananassa HOM05D004182 ORTHO05D010449 5.7e-09 65.1 34 85.3
arahy.Tifrunner.gnm1.ann1.71HDHZ Arachis hypogaea HOM05D001966 ORTHO05D010127 4.9e-08 62.0 34 85.3
Actinidia01802 Actinidia chinensis HOM05D024403 ORTHO05D007321 2.4e-07 59.7 39 66.7
Medtr5g063380 Medicago truncatula HOM05D000388 ORTHO05D009843 7.0e-07 58.2 28 92.9
Phvul.010G068900 Phaseolus vulgaris HOM05D000388 ORTHO05D009843 7.0e-07 58.2 28 92.9
CsaV3_6G032160 Cucumis sativus L. HOM05D000388 ORTHO05D009843 1.6e-06 57.0 74 54.1
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 2.7e-06 56.2 34 79.4
CAN.G904.4 Capsicum annuum HOM05D000580 ORTHO05D001362 5.9e-06 55.1 27 92.6


User provided reference genes

Program Settings