Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013522 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 4.1e-130 468.0 225 100.0
CSS0018623 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.1e-94 349.4 228 75.4
CSS0047844 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.6e-89 333.2 213 77.5
CSS0020562 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.3e-85 319.3 234 70.9
CSS0022404 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.9e-80 302.0 209 71.3
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 9.0e-37 157.9 162 43.8
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.6e-36 156.4 162 43.8
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 4.5e-36 155.6 152 45.4
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.1e-34 151.0 152 43.4
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.1e-31 141.0 175 37.7
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.1e-31 141.0 175 37.7
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.5e-31 139.8 175 37.7
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.3e-31 139.4 140 42.9
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 5.7e-31 138.7 175 37.1
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 9.7e-31 137.9 175 36.6
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 1.0e-27 127.9 129 44.2
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 3.6e-25 119.4 133 39.8
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-24 117.1 123 42.3
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.1e-24 115.5 123 41.5
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.0e-23 113.6 138 33.3
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.4e-23 111.7 123 40.7
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.4e-23 111.7 123 40.7
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 1.7e-22 110.5 146 32.9
CSS0048369 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 6.3e-22 108.6 139 38.8
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 6.3e-22 108.6 226 31.0
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 6.3e-22 108.6 171 33.3
Rhsim02G0117900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-21 107.8 122 38.5
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.4e-21 106.7 125 38.4
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.1e-21 105.9 165 32.7
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.2e-20 104.4 165 33.3
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-20 104.0 173 32.9
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.4e-20 102.8 105 43.8
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 4.5e-20 102.4 131 35.1
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.0e-19 101.3 127 33.1
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.9e-19 99.8 125 36.0
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-18 97.8 123 33.3
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.1e-18 97.8 124 30.6
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-18 97.4 123 33.3
RhsimUnG0042500 Rhododendron simsii HOM05D007376 ORTHO05D010137 1.4e-18 97.4 123 33.3
CSS0034224 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 3.2e-18 96.3 135 37.0
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 7.2e-18 95.1 92 39.1
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 7.2e-18 95.1 92 39.1
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 9.4e-18 94.7 105 41.0
CSS0047785 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.6e-17 94.0 139 36.7
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.1e-17 93.6 127 35.4
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.1e-17 93.6 127 35.4
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.1e-17 93.6 127 35.4
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.1e-17 93.6 127 35.4
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.1e-17 93.6 127 35.4
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.1e-17 93.6 127 35.4
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.7e-17 93.2 133 35.3
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.7e-17 93.2 123 31.7
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.6e-17 92.8 126 36.5
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.7e-17 92.4 126 36.5
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.7e-17 92.4 126 36.5
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.7e-17 92.4 126 36.5
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 4.7e-17 92.4 131 35.1
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.9e-17 91.7 101 39.6
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.0e-16 91.3 126 36.5
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-16 90.9 123 30.9
Rhsim05G0207500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-16 90.9 119 34.5
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.8e-16 90.5 127 34.6
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-16 90.1 131 28.2
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-16 90.1 123 30.9
CSS0001173 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.0e-16 89.7 63 63.5
PSO675G7395 Papaver somniferum HOM05D008588 ORTHO05D010137 3.0e-16 89.7 114 37.7
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.9e-16 89.4 131 28.2
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.9e-16 89.4 123 30.9
CSS0018900 Camellia sinensis var. sinensis HOM05D047189 ORTHO05D001590 8.8e-16 88.2 137 35.8
FAN06G5077 Fragaria x ananassa HOM05D011367 ORTHO05D001590 8.8e-16 88.2 165 27.9
CSS0038129 Camellia sinensis var. sinensis HOM05D047189 ORTHO05D001590 1.5e-15 87.4 137 35.8
PSO210G2316 Papaver somniferum HOM05D008588 ORTHO05D010137 2.0e-15 87.0 108 38.9
PSO541G0958 Papaver somniferum HOM05D008588 ORTHO05D010137 2.0e-15 87.0 108 38.9
FAN16G1555 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.3e-15 86.3 103 36.9
FAN16G3252 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.3e-15 86.3 103 36.9
PSO063G6468 Papaver somniferum HOM05D008588 ORTHO05D010137 3.3e-15 86.3 108 38.0
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.3e-15 86.3 121 26.4
Rhsim10G0114400 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.4e-15 85.9 163 26.4
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.7e-15 85.5 130 31.5
FAN27G1165 Fragaria x ananassa HOM05D011367 ORTHO05D001590 7.4e-15 85.1 111 35.1
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-14 84.0 99 38.4
Rhsim05G0207800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-14 84.0 107 35.5
RcHm_v2.0_Chr7g0195461 Rosa chinensis HOM05D001313 ORTHO05D001590 1.7e-14 84.0 135 31.9
FvH4_5g07921 Fragaria vesca HOM05D011367 ORTHO05D001590 2.8e-14 83.2 133 30.8
FAN05G1235 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.7e-14 82.8 103 35.9
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.7e-14 82.8 130 31.5
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.2e-14 81.6 145 27.6
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.2e-14 81.6 96 40.6
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.2e-14 81.6 145 27.6
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.2e-14 81.6 145 27.6
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 8.2e-14 81.6 146 29.5
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-13 80.9 124 28.2
FvH4_5g04060 Fragaria vesca HOM05D001313 ORTHO05D001590 3.1e-13 79.7 135 31.9
FAN08G0328 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.1e-13 79.7 135 31.9
FAN18G2114 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.1e-13 79.7 135 31.9
FAN18G3588 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.1e-13 79.7 135 31.9
Rhsim01G0025600 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.1e-13 79.7 107 33.6
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.2e-12 77.8 99 33.3
Rhsim02G0182500 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.2e-12 77.8 99 33.3
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.2e-12 77.8 99 33.3
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.2e-12 77.8 99 33.3
RhsimUnG0093700 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-12 77.4 95 35.8
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.6e-12 77.4 120 31.7
RhsimUnG0016200 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.6e-12 76.6 90 37.8
vmacro09226 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 7.7e-12 75.1 107 34.6
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.0e-11 74.7 131 26.7
CSS0048517 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 6.5e-11 72.0 142 30.3
MD06G1101600 Malus domestica HOM05D001313 ORTHO05D001590 6.5e-11 72.0 125 28.8
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-10 71.2 96 33.3
Actinidia12982 Actinidia chinensis HOM05D007376 ORTHO05D001590 1.5e-10 70.9 74 39.2
Aqoxy5G02562 Aquilegia oxysepala HOM05D001313 ORTHO05D001590 2.5e-10 70.1 136 26.5
MD06G1101900 Malus domestica HOM05D001313 ORTHO05D001590 2.5e-10 70.1 132 27.3
RcHm_v2.0_Chr3g0457901 Rosa chinensis HOM05D028871 ORTHO05D001590 5.5e-10 68.9 167 27.5
Aqoxy5G02161 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 7.2e-10 68.6 128 28.9
Aqoxy2G02824 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 9.4e-10 68.2 119 31.9
MD05G1170800 Malus domestica HOM05D023633 ORTHO05D001590 9.4e-10 68.2 126 23.0
Aqoxy3G02580 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 1.2e-09 67.8 129 29.5
Aqoxy5G01956 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 1.2e-09 67.8 129 29.5
PSO104G0253 Papaver somniferum HOM05D009650 ORTHO05D011166 1.2e-09 67.8 110 31.8
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 3.6e-09 66.2 106 33.0
FvH4_1g25221 Fragaria vesca HOM05D011367 ORTHO05D001590 4.7e-09 65.9 105 30.5
FvH4_4g08592 Fragaria vesca HOM05D001313 ORTHO05D001590 8.0e-09 65.1 133 29.3
Rhsim07G0128100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.0e-08 64.7 97 32.0
FvH4_2g03221 Fragaria vesca HOM05D001313 ORTHO05D001590 1.4e-08 64.3 133 29.3
FvH4_4g17740 Fragaria vesca HOM05D001313 ORTHO05D001590 1.4e-08 64.3 134 29.1
FAN12G2584 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.8e-08 63.9 135 28.1
PSO761G0311 Papaver somniferum HOM05D033234 ORTHO05D010137 1.8e-08 63.9 110 30.9
Prupe.5G115000 Prunus persica HOM05D001313 ORTHO05D001590 1.8e-08 63.9 132 25.0
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 6.7e-08 62.0 72 43.1
MD06G1101700 Malus domestica HOM05D001313 ORTHO05D001590 6.7e-08 62.0 107 29.0
FvH4_6g20370 Fragaria vesca HOM05D001313 ORTHO05D001590 8.8e-08 61.6 136 26.5
FAN06G4349 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.1e-07 61.2 136 27.9
FvH4_2g01890 Fragaria vesca HOM05D001313 ORTHO05D001590 1.5e-07 60.8 135 28.9
FvH4_3g30870 Fragaria vesca HOM05D001313 ORTHO05D001590 1.5e-07 60.8 134 27.6
FvH4_1g24741 Fragaria vesca HOM05D001313 ORTHO05D001590 3.3e-07 59.7 136 27.2
FvH4_3g31650 Fragaria vesca HOM05D001313 ORTHO05D001590 4.4e-07 59.3 116 27.6
FvH4_1g28820 Fragaria vesca HOM05D001313 ORTHO05D001590 1.7e-06 57.4 134 27.6
PSO063G4030 Papaver somniferum HOM05D008588 ORTHO05D010137 2.2e-06 57.0 72 34.7
PSO566G0023 Papaver somniferum HOM05D008588 ORTHO05D010137 2.2e-06 57.0 72 34.7
PSO675G2347 Papaver somniferum HOM05D008588 ORTHO05D010137 2.2e-06 57.0 72 34.7
Actinidia09092 Actinidia chinensis HOM05D026250 ORTHO05D026319 3.7e-06 56.2 77 29.9
FvH4_5g37401 Fragaria vesca HOM05D001313 ORTHO05D001590 3.7e-06 56.2 110 26.4
FAN19G2770 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.7e-06 56.2 134 26.1
MD14G1121200 Malus domestica HOM05D001313 ORTHO05D001590 4.8e-06 55.8 97 30.9


User provided reference genes

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