Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013494 Camellia sinensis var. sinensis HOM05D007680 ORTHO05D009702 2.2e-36 155.2 84 100.0
vmacro10277 Vaccinium macrocarpon HOM05D007680 ORTHO05D009702 1.1e-27 126.3 80 83.8
Hma1.2p1_0026F.1_g016760 Hydrangea macrophylla HOM05D007680 ORTHO05D009702 6.0e-26 120.6 83 78.3
Actinidia31090 Actinidia chinensis HOM05D007680 ORTHO05D009702 7.8e-26 120.2 74 86.5
Sed0005690 Sechium edule HOM05D007680 ORTHO05D009702 3.0e-25 118.2 83 78.3
QL04p041248 Quercus lobata HOM05D007680 ORTHO05D009702 1.5e-24 115.9 80 80.0
CsaV3_5G035650 Cucumis sativus L. HOM05D007680 ORTHO05D009702 2.5e-24 115.2 83 77.1
ClCG05G021580 Citrullus lanatus HOM05D007680 ORTHO05D009702 4.3e-24 114.4 81 77.8
MELO3C012366.2 Cucumis melo HOM05D007680 ORTHO05D009702 4.3e-24 114.4 83 75.9
Oeu060261.1 Olea europaea HOM05D007680 ORTHO05D009702 7.3e-24 113.6 80 72.5
FAN03G2755 Fragaria x ananassa HOM05D007680 ORTHO05D009702 1.1e-22 109.8 84 77.4
FAN06G0858 Fragaria x ananassa HOM05D007680 ORTHO05D009702 1.1e-22 109.8 84 77.4
Prupe.2G086600 Prunus persica HOM05D007680 ORTHO05D009702 1.1e-22 109.8 82 75.6
TAR636G0370 Trochodendron aralioides HOM05D007680 ORTHO05D009702 1.1e-22 109.8 87 74.7
Potri.008G025700 Populus trichocarpa HOM05D007680 ORTHO05D009702 1.4e-22 109.4 69 82.6
Potri.010G234900 Populus trichocarpa HOM05D007680 ORTHO05D009702 1.8e-22 109.0 69 82.6
MD07G1087200 Malus domestica HOM05D007680 ORTHO05D009702 2.3e-22 108.6 74 81.1
Atru.chr12.970 Acer truncatum HOM05D007680 ORTHO05D009702 4.0e-22 107.8 81 77.8
Lj2C27T21 Lonicera japonica HOM05D007680 ORTHO05D009702 4.0e-22 107.8 70 81.4
RcHm_v2.0_Chr1g0333251 Rosa chinensis HOM05D007680 ORTHO05D009702 4.0e-22 107.8 74 81.1
Sopen11g003400 Solanum pennellii HOM05D007680 ORTHO05D009702 4.0e-22 107.8 71 80.3
PGSC0003DMG400027341 Solanum tuberosum HOM05D007680 ORTHO05D009702 4.0e-22 107.8 71 80.3
HanXRQChr08g0217901 Helianthus annuus HOM05D007680 ORTHO05D009702 5.2e-22 107.5 70 78.6
SalBow6G1777 Salvia bowleyana HOM05D007680 ORTHO05D009702 5.2e-22 107.5 77 75.3
MBI17_g11658_MAGBIO Magnolia biondii HOM05D007680 ORTHO05D009702 6.8e-22 107.1 81 77.8
Haze_02610 Corylus avellana HOM05D007680 ORTHO05D009702 8.9e-22 106.7 70 81.4
ATR0820G188 Amborella trichopoda HOM05D007680 ORTHO05D009702 2.0e-21 105.5 83 78.3
Manes.05G202400 Manihot esculenta HOM05D007680 ORTHO05D009702 3.4e-21 104.8 81 70.4
TAR636G3254 Trochodendron aralioides HOM05D007680 ORTHO05D009702 4.4e-21 104.4 87 72.4
CiPaw.14G028600 Carya illinoinensis HOM05D007680 ORTHO05D009702 5.8e-21 104.0 73 78.1
Gorai.009G304500 Gossypium raimondii HOM05D007680 ORTHO05D009702 7.5e-21 103.6 81 75.3
TAR636G2061 Trochodendron aralioides HOM05D007680 ORTHO05D009702 7.5e-21 103.6 70 82.9
Cfa011226 Carpinus fangiana HOM05D007680 ORTHO05D009702 1.3e-20 102.8 70 77.1
Gohir.A05G288200 Gossypium hirsutum HOM05D007680 ORTHO05D009702 1.3e-20 102.8 81 75.3
Ciclev10032885m.g Citrus clementina HOM05D007680 ORTHO05D009702 1.7e-20 102.4 83 73.5
Thecc.10G109800 Theobroma cacao HOM05D007680 ORTHO05D009702 2.2e-20 102.1 84 73.8
Thecc.K0008600 Theobroma cacao HOM05D007680 ORTHO05D009702 2.2e-20 102.1 84 73.8
Migut.F01656 Erythranthe guttata HOM05D007680 ORTHO05D009702 3.7e-20 101.3 78 69.2
Nn2g14013 Nelumbo nucifera HOM05D007680 ORTHO05D009702 3.7e-20 101.3 78 73.1
Duzib128G1419 Durio zibethinus HOM05D007680 ORTHO05D009702 4.9e-20 100.9 81 75.3
Gohir.D05G289400 Gossypium hirsutum HOM05D007680 ORTHO05D009702 6.4e-20 100.5 81 74.1
Hund17353 Selenicereus undatus HOM05D007680 ORTHO05D009702 6.4e-20 100.5 72 68.1
CDE08G1572 Ceratophyllum demersum HOM05D007680 ORTHO05D009702 8.3e-20 100.1 81 67.9
GSVIVG01034708001 Vitis vinifera HOM05D007680 ORTHO05D009702 8.3e-20 100.1 89 65.2
Aqoxy2G01382 Aquilegia oxysepala HOM05D007680 ORTHO05D009702 1.1e-19 99.8 80 68.8
Lalb_Chr01g0010321 Lupinus albus HOM05D007680 ORTHO05D009702 1.1e-19 99.8 70 81.4
Ah.10g034230 Amaranthus hybridus HOM05D007680 ORTHO05D009702 1.4e-19 99.4 83 62.7
Cpa.g.sc128.47 Carica papaya HOM05D007680 ORTHO05D009702 1.9e-19 99.0 74 77.0
CDE02G0611 Ceratophyllum demersum HOM05D007680 ORTHO05D009702 2.4e-19 98.6 80 67.5
unitig_899.g15034 Utricularia gibba HOM05D007680 ORTHO05D009702 2.4e-19 98.6 71 74.6
EL10Ac2g03857 Beta vulgaris HOM05D007680 ORTHO05D009702 3.2e-19 98.2 69 72.5
Medtr1g050700 Medicago truncatula HOM05D007680 ORTHO05D009702 4.1e-19 97.8 81 71.6
COL.COLO4_33896 Corchorus olitorius HOM05D007680 ORTHO05D009702 5.4e-19 97.4 70 81.4
Dinv30655 Davidia involucrata HOM05D007680 ORTHO05D009702 7.1e-19 97.1 66 78.8
THA.LOC104824894 Tarenaya hassleriana HOM05D007680 ORTHO05D009702 7.1e-19 97.1 74 75.7
THA.LOC104824900 Tarenaya hassleriana HOM05D007680 ORTHO05D009702 7.1e-19 97.1 74 75.7
arahy.Tifrunner.gnm1.ann1.VK4BH4 Arachis hypogaea HOM05D007680 ORTHO05D009702 3.5e-18 94.7 70 75.7
Psat6g094320 Pisum sativum HOM05D007680 ORTHO05D009702 6.0e-18 94.0 70 78.6
PGR044G0006 Punica granatum HOM05D007680 ORTHO05D009702 6.0e-18 94.0 81 72.8
TWI38G2267 Tripterygium wilfordii HOM05D007680 ORTHO05D009702 7.8e-18 93.6 73 74.0
Phvul.007G245300 Phaseolus vulgaris HOM05D007680 ORTHO05D009702 1.3e-17 92.8 87 64.4
Glyma.02G165700 Glycine max HOM05D007680 ORTHO05D009702 1.7e-17 92.4 70 74.3
Thhalv10026523m.g Eutrema salsugineum HOM05D007680 ORTHO05D009702 2.3e-17 92.0 83 67.5
Sc20g0001300 Simmondsia chinensis HOM05D007680 ORTHO05D009702 2.3e-17 92.0 65 70.8
TPR.G305 Trifolium pratense HOM05D007680 ORTHO05D009702 2.3e-17 92.0 67 79.1
TPR.G7612 Trifolium pratense HOM05D007680 ORTHO05D009702 2.3e-17 92.0 67 79.1
Sabra10G0182100 Salix brachista HOM05D007680 ORTHO05D009702 5.1e-17 90.9 61 70.5
Sp7g35810 Schrenkiella parvula HOM05D007680 ORTHO05D009702 5.1e-17 90.9 80 65.0
Lalb_Chr19g0129271 Lupinus albus HOM05D007680 ORTHO05D009702 1.5e-16 89.4 69 73.9
VMungo0720G1600 Vigna mungo HOM05D007680 ORTHO05D009702 1.9e-16 89.0 69 73.9
A01p00970 Brassica napus HOM05D007680 ORTHO05D009702 2.5e-16 88.6 80 66.2
BraA01t00095Z Brassica rapa HOM05D007680 ORTHO05D009702 2.5e-16 88.6 80 66.2
SEGI_03872 Sequoiadendron giganteum HOM05D007680 ORTHO05D009702 7.3e-16 87.0 59 79.7
AT4G40045 Arabidopsis thaliana HOM05D007680 ORTHO05D009702 1.2e-15 86.3 80 62.5
AL7G12370 Arabidopsis lyrata HOM05D007680 ORTHO05D009702 1.6e-15 85.9 67 73.1
Lsat_1_v5_gn_2_102521 Lactuca sativa HOM05D007680 ORTHO05D009702 2.8e-15 85.1 84 57.1
CARHR246610 Cardamine hirsuta HOM05D007680 ORTHO05D009702 4.7e-15 84.3 80 62.5
BolC1t00107H Brassica oleracea HOM05D007680 ORTHO05D009702 8.1e-15 83.6 70 72.9
Carub.0007s0203 Capsella rubella HOM05D007680 ORTHO05D009702 8.1e-15 83.6 80 61.2
PSO384G1244 Papaver somniferum HOM05D007680 ORTHO05D009702 1.1e-14 83.2 83 63.9
C01p01090 Brassica napus HOM05D007680 ORTHO05D009702 1.8e-14 82.4 70 71.4
AUR62043943 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.5e-13 79.3 47 76.6
Zm00001eb411120 Zea mays HOM05D007680 ORTHO05D009702 8.4e-12 73.6 79 58.2
arahy.Tifrunner.gnm1.ann1.UIS3VC Arachis hypogaea HOM05D007680 ORTHO05D009702 4.1e-11 71.2 80 53.8
Lj6g0009049 Lotus japonicus HOM05D007680 ORTHO05D009702 4.1e-11 71.2 53 71.7
SGA_v2.0_scaffold10G05320 Striga asiatica HOM05D007680 ORTHO05D009702 4.1e-11 71.2 43 74.4
SGA_v2.0_scaffold154G37188 Striga asiatica HOM05D004374 ORTHO05D005430 2.1e-10 68.9 38 78.9
Os12g0206700 Oryza sativa ssp. japonica HOM05D007680 ORTHO05D009702 2.7e-10 68.6 83 56.6
MD07G1069500 Malus domestica HOM05D007680 ORTHO05D009702 3.5e-10 68.2 63 58.7
Glyma.10G104651 Glycine max HOM05D007680 ORTHO05D009702 1.7e-09 65.9 56 64.3
Zm00001eb004510 Zea mays HOM05D007680 ORTHO05D009702 1.7e-09 65.9 79 55.7
DCAR_006372 Daucus carota HOM05D007680 ORTHO05D009702 3.6e-07 58.2 39 64.1
MBI17_g15050_MAGBIO Magnolia biondii HOM05D007680 ORTHO05D009702 5.2e-06 54.3 38 65.8


User provided reference genes

Program Settings