Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013465 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 2.1e-123 445.7 219 100.0
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 3.9e-93 345.1 218 78.0
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 2.0e-89 332.8 213 76.1
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 3.9e-85 318.5 214 75.2
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 1.3e-83 313.5 214 74.8
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 3.5e-78 295.4 217 71.4
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 1.1e-76 290.4 217 66.8
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 1.3e-75 287.0 216 65.3
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 3.6e-75 285.4 217 68.7
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 4.8e-75 285.0 219 66.2
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 1.8e-74 283.1 213 65.7
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 2.4e-74 282.7 218 65.6
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 4.0e-74 282.0 220 65.0
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 2.6e-73 279.3 216 63.9
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 1.4e-71 273.5 219 63.9
Atru.chr8.1898 Acer truncatum HOM05D007272 ORTHO05D009305 2.4e-71 272.7 217 65.9
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 3.2e-71 272.3 216 64.4
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 7.1e-71 271.2 217 62.7
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 1.2e-70 270.4 218 64.2
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 7.9e-70 267.7 221 63.3
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 5.1e-69 265.0 211 62.6
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 6.7e-69 264.6 221 62.0
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 6.7e-69 264.6 219 63.9
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 1.1e-68 263.8 216 62.5
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 6.2e-67 258.1 222 60.8
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 6.2e-67 258.1 219 59.4
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.8e-66 256.5 222 60.8
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 2.4e-66 256.1 220 61.8
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 5.3e-66 255.0 221 59.7
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 9.0e-66 254.2 217 59.0
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 1.2e-65 253.8 216 60.6
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 2.0e-65 253.1 222 57.2
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 2.6e-65 252.7 222 59.9
Glyma.19G020400 Glycine max HOM05D007272 ORTHO05D009305 4.5e-65 251.9 224 59.8
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 1.3e-64 250.4 220 60.5
VMungo0464G0783 Vigna mungo HOM05D007272 ORTHO05D009305 1.7e-64 250.0 218 59.6
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 2.9e-64 249.2 218 58.3
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 4.9e-64 248.4 216 57.4
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 1.1e-63 247.3 218 57.8
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 1.1e-63 247.3 217 59.4
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 5.5e-63 245.0 217 56.7
Medtr6g011500 Medicago truncatula HOM05D007272 ORTHO05D009305 1.2e-62 243.8 218 58.3
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 1.2e-62 243.8 231 59.3
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 2.3e-61 239.6 223 60.1
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 6.7e-61 238.0 219 58.4
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 1.5e-60 236.9 221 57.9
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 5.7e-60 235.0 212 56.6
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 5.7e-60 235.0 212 59.0
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 1.3e-59 233.8 218 57.3
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 2.1e-59 233.0 209 55.0
HanXRQChr14g0449311 Helianthus annuus HOM05D007272 ORTHO05D009305 2.1e-59 233.0 218 53.7
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 2.4e-58 229.6 176 63.1
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 3.1e-58 229.2 219 53.0
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 4.5e-57 225.3 218 51.4
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 4.5e-57 225.3 225 54.7
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 1.3e-56 223.8 220 55.9
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 1.3e-56 223.8 220 55.5
PGSC0003DMG400001312 Solanum tuberosum HOM05D007272 ORTHO05D009305 1.7e-56 223.4 219 55.3
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 2.2e-56 223.0 218 57.3
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 6.5e-56 221.5 218 55.5
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 1.1e-55 220.7 222 53.6
Psat1g075440 Pisum sativum HOM05D007272 ORTHO05D009305 1.9e-55 219.9 212 55.7
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 3.2e-55 219.2 213 54.5
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 7.2e-55 218.0 202 55.0
FAN05G2713 Fragaria x ananassa HOM05D007272 ORTHO05D009305 7.9e-54 214.5 224 53.1
FvH4_6g49170 Fragaria vesca HOM05D007272 ORTHO05D009305 1.3e-53 213.8 224 53.1
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 1.3e-53 213.8 224 53.1
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 2.3e-53 213.0 217 53.5
FAN14G5197 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.1e-52 210.7 224 52.2
RcHm_v2.0_Chr2g0169041 Rosa chinensis HOM05D007272 ORTHO05D009305 3.3e-52 209.1 225 52.4
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 1.6e-51 206.8 214 48.6
Lj2g0009951 Lotus japonicus HOM05D007272 ORTHO05D009305 1.1e-50 204.1 193 56.0
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 2.4e-50 203.0 192 52.6
PSO832G2300 Papaver somniferum HOM05D007272 ORTHO05D009305 4.1e-50 202.2 207 51.7
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 3.4e-49 199.1 192 56.8
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 1.0e-48 197.6 207 50.7
MD17G1048100 Malus domestica HOM05D007272 ORTHO05D009305 2.5e-47 193.0 219 48.9
Gorai.012G056400 Gossypium raimondii HOM05D007272 ORTHO05D009305 1.4e-45 187.2 194 52.6
Gohir.D04G050866 Gossypium hirsutum HOM05D007272 ORTHO05D009305 3.9e-45 185.7 194 52.1
Os01g0185400 Oryza sativa ssp. japonica HOM05D007272 ORTHO05D009305 3.3e-44 182.6 219 47.0
Gohir.A05G363800 Gossypium hirsutum HOM05D007272 ORTHO05D009305 7.4e-44 181.4 190 52.6
Zm00001eb121640 Zea mays HOM05D007272 ORTHO05D009305 4.1e-42 175.6 220 46.8
CDE04G0606 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 9.1e-42 174.5 199 47.2
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 2.9e-40 169.5 222 43.2
MD09G1047900 Malus domestica HOM05D007272 ORTHO05D009305 2.9e-40 169.5 194 52.1
FAN09G2990 Fragaria x ananassa HOM05D007272 ORTHO05D009305 8.5e-32 141.4 128 59.4
Aqoxy3G03290 Aquilegia oxysepala HOM05D007272 ORTHO05D009305 1.1e-31 141.0 130 56.2
Dinv33728 Davidia involucrata HOM05D007272 ORTHO05D009305 1.8e-29 133.7 83 78.3
Pp3c15_23310 Physcomitrium patens HOM05D007272 ORTHO05D009305 2.3e-29 133.3 227 36.6
Zm00001eb204740 Zea mays HOM05D007272 ORTHO05D009305 4.8e-27 125.6 138 50.0
Hma1.2p1_0449F.1_g155150 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 9.1e-26 121.3 174 41.4
Hma1.2p1_2982F.1_g331245 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 9.1e-26 121.3 174 41.4
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 1.0e-21 107.8 218 36.2
SGA_v2.0_scaffold52G19082 Striga asiatica HOM05D007272 ORTHO05D009305 5.2e-21 105.5 152 44.1
ATR0693G009 Amborella trichopoda HOM05D007272 ORTHO05D009305 6.8e-21 105.1 103 51.5
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 4.4e-20 102.4 140 39.3
SGA_v2.0_scaffold52G19148 Striga asiatica HOM05D007272 ORTHO05D009305 9.1e-18 94.7 111 48.6
SGA_v2.0_scaffold52G19157 Striga asiatica HOM05D016586 ORTHO05D009305 8.0e-14 81.6 62 64.5
Medtr8g044020 Medicago truncatula HOM05D007272 ORTHO05D009305 1.0e-13 81.3 65 58.5
Dinv33460 Davidia involucrata HOM05D007272 ORTHO05D010159 3.0e-13 79.7 51 68.6


User provided reference genes

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