Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 7.0e-234 813.5 398 100.0
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 3.1e-181 638.6 413 78.0
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 7.4e-175 617.5 407 75.4
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 5.1e-168 594.7 407 73.5
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 1.6e-166 589.7 407 72.7
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 4.9e-163 578.2 406 70.0
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 1.1e-162 577.0 416 70.7
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 3.2e-162 575.5 409 70.9
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 4.2e-162 575.1 409 70.7
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 3.5e-161 572.0 374 74.3
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 4.6e-161 571.6 372 74.2
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 3.3e-159 565.5 412 69.4
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 2.8e-158 562.4 399 69.2
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 4.8e-158 561.6 406 69.2
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 8.2e-158 560.8 379 72.3
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 1.1e-157 560.5 410 68.3
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 1.1e-157 560.5 379 72.0
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 1.1e-157 560.5 399 69.7
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 1.4e-157 560.1 420 68.8
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 1.8e-157 559.7 392 69.9
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 1.8e-157 559.7 401 69.1
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 4.1e-157 558.5 410 67.8
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 9.0e-157 557.4 410 67.8
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 9.0e-157 557.4 408 67.4
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 2.6e-156 555.8 403 68.5
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 2.6e-156 555.8 403 68.5
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 7.7e-156 554.3 386 69.7
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 1.0e-155 553.9 390 71.0
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 1.7e-155 553.1 404 69.6
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 2.2e-155 552.7 404 68.1
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 2.9e-155 552.4 351 76.4
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 3.8e-155 552.0 406 67.7
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 3.8e-155 552.0 403 66.5
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 3.8e-155 552.0 398 68.3
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 1.1e-154 550.4 411 67.9
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 1.9e-154 549.7 404 67.3
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 5.5e-154 548.1 402 67.7
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 9.4e-154 547.4 397 67.5
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 2.1e-153 546.2 404 66.8
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 2.7e-153 545.8 309 85.1
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 1.0e-152 543.9 398 67.8
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 5.1e-152 541.6 430 63.5
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 6.7e-152 541.2 343 74.3
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 6.7e-152 541.2 400 66.5
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 1.1e-151 540.4 402 66.2
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 1.1e-151 540.4 400 67.0
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 1.5e-151 540.0 396 67.2
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 1.5e-151 540.0 400 67.0
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 2.0e-151 539.7 354 72.0
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 3.3e-151 538.9 417 65.5
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 7.4e-151 537.7 430 64.4
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 9.7e-151 537.3 396 67.2
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 2.2e-150 536.2 413 67.3
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 2.8e-150 535.8 397 68.0
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 3.7e-150 535.4 382 68.3
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 3.1e-149 532.3 397 67.3
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 3.1e-149 532.3 394 66.8
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 1.2e-148 530.4 407 67.8
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 3.4e-148 528.9 399 66.2
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 1.3e-147 526.9 384 67.4
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 1.7e-147 526.6 383 65.8
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 2.9e-147 525.8 338 72.8
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 3.8e-147 525.4 402 66.7
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 1.1e-146 523.9 343 70.3
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 1.9e-146 523.1 386 67.1
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 1.9e-146 523.1 386 67.1
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 2.5e-146 522.7 397 64.7
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 4.2e-146 521.9 381 68.2
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 5.5e-146 521.5 318 77.0
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 1.2e-145 520.4 389 66.8
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 2.7e-145 519.2 395 64.6
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 7.9e-145 517.7 395 63.8
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 7.9e-145 517.7 388 66.5
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 1.0e-144 517.3 346 72.8
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 2.3e-144 516.2 385 66.2
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 2.3e-144 516.2 383 66.3
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 5.1e-144 515.0 419 62.8
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 8.8e-144 514.2 395 64.1
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 2.6e-143 512.7 399 63.9
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 2.6e-143 512.7 399 63.9
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 7.4e-143 511.1 406 63.1
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 1.7e-142 510.0 346 70.8
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 2.2e-142 509.6 321 76.3
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 2.4e-141 506.1 374 65.8
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 9.1e-141 504.2 399 63.9
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 1.5e-138 496.9 411 60.6
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 1.1e-135 487.3 314 73.2
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 9.7e-135 484.2 358 65.1
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 3.2e-130 469.2 322 72.0
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 5.5e-130 468.4 359 62.4
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 2.7e-129 466.1 312 75.6
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 7.5e-127 458.0 396 59.1
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 1.4e-125 453.8 343 64.4
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 2.4e-125 453.0 296 72.6
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 1.6e-124 450.3 362 61.6
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 7.7e-116 421.4 359 58.5
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 3.0e-112 409.5 248 77.0
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 1.4e-109 400.6 350 60.6
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 1.6e-108 397.1 248 76.2
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 1.3e-107 394.0 338 56.8
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 1.5e-106 390.6 256 71.5
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 1.2e-103 380.9 347 61.1
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 3.5e-100 369.4 402 49.5
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 1.9e-98 363.6 302 62.6
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 1.7e-91 340.5 249 67.9
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 4.7e-89 332.4 359 45.4
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 1.3e-83 314.3 361 42.7
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 5.8e-71 272.3 342 39.8
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 3.4e-63 246.5 184 63.6
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 4.2e-45 186.4 126 67.5
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.0e-43 180.3 159 58.5
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 1.1e-40 171.8 150 58.0
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 2.2e-38 164.1 213 40.8
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 1.2e-36 158.3 91 80.2
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 4.6e-36 156.4 101 72.3
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 3.2e-29 133.7 111 58.6
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 4.5e-23 113.2 88 59.1
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 2.2e-14 84.3 91 49.5
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 6.5e-14 82.8 50 68.0
Haze_14448 Corylus avellana HOM05D006813 ORTHO05D008657 8.5e-06 55.8 132 35.6


User provided reference genes

Program Settings