Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013341 Camellia sinensis var. sinensis HOM05D005285 ORTHO05D006829 3.2e-217 758.1 365 100.0
Dinv09380 Davidia involucrata HOM05D005285 ORTHO05D006829 2.0e-190 669.1 363 88.2
Actinidia20684 Actinidia chinensis HOM05D005285 ORTHO05D006829 2.6e-190 668.7 365 88.2
Rhsim01G0131200 Rhododendron simsii HOM05D005285 ORTHO05D006829 5.3e-188 661.0 371 87.1
GSVIVG01032048001 Vitis vinifera HOM05D005285 ORTHO05D006829 1.3e-186 656.4 364 86.5
Hma1.2p1_1011F.1_g247500 Hydrangea macrophylla HOM05D005285 ORTHO05D006829 5.5e-185 651.0 389 81.7
Lj9A629T99 Lonicera japonica HOM05D005285 ORTHO05D006829 5.5e-185 651.0 363 86.2
Cc02_g27470 Coffea canephora HOM05D005285 ORTHO05D006829 1.2e-184 649.8 363 86.0
TAR636G1692 Trochodendron aralioides HOM05D005285 ORTHO05D006829 5.2e-183 644.4 363 84.8
Gohir.A08G026900 Gossypium hirsutum HOM05D005285 ORTHO05D006829 6.7e-183 644.0 363 86.0
Thecc.01G414500 Theobroma cacao HOM05D005285 ORTHO05D006829 8.8e-183 643.7 363 84.8
TWI09G0675 Tripterygium wilfordii HOM05D005285 ORTHO05D006829 3.3e-182 641.7 370 82.4
Peaxi162Scf00042g00510 Petunia axillaris HOM05D005285 ORTHO05D006829 7.4e-182 640.6 362 84.5
Gorai.004G035700 Gossypium raimondii HOM05D005285 ORTHO05D006829 1.7e-181 639.4 363 85.1
Duzib268G1126 Durio zibethinus HOM05D005285 ORTHO05D006829 1.1e-180 636.7 363 84.0
Oeu064272.1 Olea europaea HOM05D005285 ORTHO05D006829 1.4e-180 636.3 365 84.1
Gohir.D08G037700 Gossypium hirsutum HOM05D005285 ORTHO05D006829 3.1e-180 635.2 364 84.6
Manes.10G147800 Manihot esculenta HOM05D005285 ORTHO05D006829 2.0e-179 632.5 367 83.4
Nitab4.5_0002012g0040 Nicotiana tabacum HOM05D005285 ORTHO05D006829 2.0e-179 632.5 360 83.6
Haze_03242 Corylus avellana HOM05D005285 ORTHO05D006829 2.6e-179 632.1 364 84.1
Lsat_1_v5_gn_1_109141 Lactuca sativa HOM05D005285 ORTHO05D006829 3.5e-179 631.7 365 82.5
Cfa010729 Carpinus fangiana HOM05D005285 ORTHO05D006829 4.5e-179 631.3 364 84.1
DCAR_029637 Daucus carota HOM05D005285 ORTHO05D006829 5.9e-179 630.9 365 82.2
Potri.001G271100 Populus trichocarpa HOM05D005285 ORTHO05D006829 1.0e-178 630.2 367 83.4
PGR044G0372 Punica granatum HOM05D005285 ORTHO05D006829 2.9e-178 628.6 364 82.4
Nn7g36086 Nelumbo nucifera HOM05D005285 ORTHO05D006829 3.8e-178 628.2 366 82.2
Nitab4.5_0000050g0030 Nicotiana tabacum HOM05D005285 ORTHO05D006829 5.0e-178 627.9 358 83.5
Eucgr.J01257 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.1e-177 626.7 367 82.3
Oeu039102.1 Olea europaea HOM05D005285 ORTHO05D006829 2.5e-177 625.5 360 84.2
FAN03G1002 Fragaria x ananassa HOM05D005285 ORTHO05D006829 4.2e-177 624.8 365 81.1
RcHm_v2.0_Chr1g0314801 Rosa chinensis HOM05D005285 ORTHO05D006829 4.2e-177 624.8 365 82.7
ClCG10G012540 Citrullus lanatus HOM05D005285 ORTHO05D006829 5.5e-177 624.4 363 82.6
MBI04_g14265_MAGBIO Magnolia biondii HOM05D005285 ORTHO05D006829 7.2e-177 624.0 361 82.5
Ciclev10031943m.g Citrus clementina HOM05D005285 ORTHO05D006829 9.4e-177 623.6 363 81.8
Migut.B01343 Erythranthe guttata HOM05D005285 ORTHO05D006829 1.2e-176 623.2 363 82.6
Sed0014745 Sechium edule HOM05D005285 ORTHO05D006829 1.6e-176 622.9 363 82.4
MSTRG.20606 Avicennia marina HOM05D005285 ORTHO05D006829 2.1e-176 622.5 361 82.8
FAN06G0391 Fragaria x ananassa HOM05D005285 ORTHO05D006829 2.1e-176 622.5 365 81.6
MD07G1005600 Malus domestica HOM05D005285 ORTHO05D006829 2.1e-176 622.5 361 82.3
Sopen10g011740 Solanum pennellii HOM05D005285 ORTHO05D006829 2.7e-176 622.1 362 82.6
QL04p004838 Quercus lobata HOM05D005285 ORTHO05D006829 3.6e-176 621.7 363 83.2
vmacro21170 Vaccinium macrocarpon HOM05D005285 ORTHO05D006829 3.6e-176 621.7 419 76.6
FAN01G1197 Fragaria x ananassa HOM05D005285 ORTHO05D006829 4.7e-176 621.3 365 81.1
FvH4_7g00610 Fragaria vesca HOM05D005285 ORTHO05D006829 6.1e-176 620.9 365 81.4
FAN10G3755 Fragaria x ananassa HOM05D005285 ORTHO05D006829 6.1e-176 620.9 365 81.4
CANSAT21G0587 Cannabis sativa HOM05D005285 ORTHO05D006829 8.0e-176 620.5 363 82.1
MELO3C023957.2 Cucumis melo HOM05D005285 ORTHO05D006829 2.3e-175 619.0 363 82.4
Cpa.g.sc234.2 Carica papaya HOM05D005285 ORTHO05D006829 3.0e-175 618.6 364 80.8
CsaV3_3G032330 Cucumis sativus L. HOM05D005285 ORTHO05D006829 3.0e-175 618.6 363 81.8
TWI53G0546 Tripterygium wilfordii HOM05D005285 ORTHO05D006829 6.8e-175 617.5 366 80.1
MD02G1316300 Malus domestica HOM05D005285 ORTHO05D006829 1.5e-174 616.3 361 82.0
EL10Ac2g04308 Beta vulgaris HOM05D005285 ORTHO05D006829 2.0e-174 615.9 362 81.2
Lalb_Chr03g0033921 Lupinus albus HOM05D005285 ORTHO05D006829 3.4e-174 615.1 361 81.4
SalBow5G3096 Salvia bowleyana HOM05D005285 ORTHO05D006829 3.4e-174 615.1 363 81.5
COL.COLO4_23903 Corchorus olitorius HOM05D005285 ORTHO05D006829 9.7e-174 613.6 370 81.4
Aqoxy2G00109 Aquilegia oxysepala HOM05D005285 ORTHO05D006829 1.3e-173 613.2 365 79.7
Phvul.011G213800 Phaseolus vulgaris HOM05D005285 ORTHO05D006829 1.7e-173 612.8 361 82.3
SalBow5G3836 Salvia bowleyana HOM05D005285 ORTHO05D006829 2.2e-173 612.5 363 81.0
Eucgr.J01254 Eucalyptus grandis HOM05D005285 ORTHO05D006829 2.8e-173 612.1 365 79.5
Eucgr.J01253 Eucalyptus grandis HOM05D005285 ORTHO05D006829 3.7e-173 611.7 365 79.2
Eucgr.J01256 Eucalyptus grandis HOM05D005285 ORTHO05D006829 3.7e-173 611.7 365 79.2
ECA248G0026 Erigeron canadensis HOM05D005285 ORTHO05D006829 4.8e-173 611.3 365 78.9
AUR62023050 Chenopodium quinoa HOM05D005285 ORTHO05D006829 6.3e-173 610.9 360 81.7
VMungo1127G2059 Vigna mungo HOM05D005285 ORTHO05D006829 8.3e-173 610.5 361 82.5
SGA_v2.0_scaffold646G53323 Striga asiatica HOM05D005285 ORTHO05D006829 1.4e-172 609.8 360 81.7
PSO339G1127 Papaver somniferum HOM05D005285 ORTHO05D006829 1.8e-172 609.4 369 79.1
Aa31LG11G7560 Aethionema arabicum HOM05D005285 ORTHO05D006829 3.1e-172 608.6 362 81.2
Glyma.12G239400 Glycine max HOM05D005285 ORTHO05D006829 3.1e-172 608.6 361 81.7
Lj3g0011351 Lotus japonicus HOM05D005285 ORTHO05D006829 9.1e-172 607.1 361 80.9
Hund03676 Selenicereus undatus HOM05D005285 ORTHO05D006829 1.6e-171 606.3 358 80.2
THA.LOC104819060 Tarenaya hassleriana HOM05D005285 ORTHO05D006829 1.7e-170 602.8 362 79.0
Hund03675 Selenicereus undatus HOM05D005285 ORTHO05D006829 2.2e-170 602.4 391 74.4
PSO384G1382 Papaver somniferum HOM05D005285 ORTHO05D006829 1.1e-169 600.1 365 78.9
arahy.Tifrunner.gnm1.ann1.DICK3U Arachis hypogaea HOM05D005285 ORTHO05D006829 2.5e-169 599.0 362 79.6
Psat4g195080 Pisum sativum HOM05D005285 ORTHO05D006829 9.4e-169 597.0 359 79.4
CDE04G1667 Ceratophyllum demersum HOM05D005285 ORTHO05D006829 3.6e-168 595.1 367 76.3
AL8G20280 Arabidopsis lyrata HOM05D005285 ORTHO05D006829 4.7e-168 594.7 362 79.0
Thhalv10004473m.g Eutrema salsugineum HOM05D005285 ORTHO05D006829 6.1e-168 594.3 363 79.1
Medtr8g036165 Medicago truncatula HOM05D005285 ORTHO05D006829 1.8e-167 592.8 361 78.9
unitig_26.g9596 Utricularia gibba HOM05D005285 ORTHO05D006829 6.8e-167 590.9 361 77.6
BcaC06g30830 Brassica carinata HOM05D005285 ORTHO05D006829 8.8e-167 590.5 362 78.2
Sp2g18470 Schrenkiella parvula HOM05D005285 ORTHO05D006829 8.8e-167 590.5 359 79.1
A06p39410 Brassica napus HOM05D005285 ORTHO05D006829 4.4e-166 588.2 362 78.2
BraA06t26856Z Brassica rapa HOM05D005285 ORTHO05D006829 4.4e-166 588.2 362 78.2
Os02g0717500 Oryza sativa ssp. japonica HOM05D005285 ORTHO05D006829 2.2e-165 585.9 362 75.4
FAN01G1198 Fragaria x ananassa HOM05D005285 ORTHO05D006829 2.8e-165 585.5 456 65.1
BolC7t44405H Brassica oleracea HOM05D005285 ORTHO05D006829 3.7e-165 585.1 362 77.9
Sabra16G0166500 Salix brachista HOM05D005285 ORTHO05D006829 6.3e-165 584.3 441 68.7
Carub.0008s0757 Capsella rubella HOM05D005285 ORTHO05D006829 1.1e-164 583.6 362 78.2
C07p38860 Brassica napus HOM05D005285 ORTHO05D006829 1.4e-164 583.2 362 77.9
ATR0605G013 Amborella trichopoda HOM05D005285 ORTHO05D006829 1.8e-164 582.8 366 76.2
Zm00001eb189240 Zea mays HOM05D005285 ORTHO05D006829 1.8e-164 582.8 359 76.6
Lj9C629T1 Lonicera japonica HOM05D005285 ORTHO05D006829 3.1e-164 582.0 356 78.7
Ca_23856_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 4.1e-164 581.6 361 77.8
AT5G48020 Arabidopsis thaliana HOM05D005285 ORTHO05D006829 7.0e-164 580.9 362 76.5
CARHR184290 Cardamine hirsuta HOM05D005285 ORTHO05D006829 7.0e-164 580.9 362 76.8
AUR62009369 Chenopodium quinoa HOM05D005285 ORTHO05D006829 8.0e-160 567.4 335 81.2
SGA_v2.0_scaffold646G53324 Striga asiatica HOM05D005285 ORTHO05D006829 5.2e-159 564.7 455 62.6
Atru.chr11.2010 Acer truncatum HOM05D005285 ORTHO05D006829 1.9e-153 546.2 358 72.9
SEGI_06931 Sequoiadendron giganteum HOM05D005285 ORTHO05D006829 3.3e-153 545.4 372 69.6
QL04p004878 Quercus lobata HOM05D005285 ORTHO05D006829 2.8e-152 542.3 360 71.4
Lsat_1_v5_gn_1_111020 Lactuca sativa HOM05D005285 ORTHO05D006829 1.8e-151 539.7 362 70.2
ECA248G2524 Erigeron canadensis HOM05D005285 ORTHO05D006829 3.4e-150 535.4 360 69.4
ECA248G2079 Erigeron canadensis HOM05D005285 ORTHO05D006829 4.4e-150 535.0 364 69.2
HanXRQChr11g0330581 Helianthus annuus HOM05D005285 ORTHO05D006829 7.5e-150 534.3 362 69.3
QL04p004868 Quercus lobata HOM05D005285 ORTHO05D006829 3.7e-149 531.9 360 69.2
Atru.chr11.2632 Acer truncatum HOM05D005285 ORTHO05D006829 4.9e-149 531.6 389 70.4
HanXRQChr11g0330561 Helianthus annuus HOM05D005285 ORTHO05D006829 3.5e-147 525.4 361 67.9
QL04p004849 Quercus lobata HOM05D005285 ORTHO05D006829 1.7e-146 523.1 362 67.1
AagrBONN_evm.TU.Sc2ySwM_228.3236 Anthoceros agrestis HOM05D005285 ORTHO05D006829 1.9e-145 519.6 365 67.1
Prupe.2G008000 Prunus persica HOM05D005285 ORTHO05D006829 3.3e-145 518.8 276 90.6
SMO364G0792 Selaginella moellendorffii HOM05D005285 ORTHO05D006829 6.0e-139 498.0 358 64.0
SHI04065 Sapria himalayana HOM05D000259 ORTHO05D000155 8.6e-138 494.2 519 51.6
Mapoly0019s0106 Marchantia polymorpha HOM05D005285 ORTHO05D006829 1.1e-137 493.8 363 63.4
Prupe.2G008200 Prunus persica HOM05D005285 ORTHO05D006829 2.2e-133 479.6 257 89.1
Sc11g0009350 Simmondsia chinensis HOM05D005285 ORTHO05D006829 4.6e-131 471.9 270 81.5
Sed0008744 Sechium edule HOM05D005285 ORTHO05D006829 8.1e-128 461.1 346 69.7
Pp3c17_23530 Physcomitrium patens HOM05D005285 ORTHO05D006829 7.1e-124 448.0 385 57.7
HPP92_022786 Vanilla planifolia HOM05D005285 ORTHO05D006829 1.2e-115 420.6 278 73.0
Ca_24082_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 3.2e-108 396.0 350 54.9
Lsat_1_v5_gn_1_72821 Lactuca sativa HOM05D005285 ORTHO05D006829 3.2e-108 396.0 348 57.5
Pp3c14_26250 Physcomitrium patens HOM05D005285 ORTHO05D006829 2.5e-100 369.8 302 59.6
Cre13.g586400 Chlamydomonas reinhardtii HOM05D005285 ORTHO05D006829 1.8e-98 363.6 350 51.7
Solyc10g037950.2 Solanum lycopersicum HOM05D005285 ORTHO05D006829 1.1e-87 327.8 202 78.7
arahy.Tifrunner.gnm1.ann1.A7HRCY Arachis hypogaea HOM05D005285 ORTHO05D006829 1.0e-85 321.2 271 61.6
HanXRQChr11g0330591 Helianthus annuus HOM05D005285 ORTHO05D006829 2.2e-85 320.1 226 67.7
Solyc10g037960.3 Solanum lycopersicum HOM05D005285 ORTHO05D006829 5.7e-81 305.4 162 87.7
Eucgr.L03705 Eucalyptus grandis HOM05D005285 ORTHO05D006829 2.2e-80 303.5 180 80.6
TPR.G21737 Trifolium pratense HOM05D005285 ORTHO05D006829 2.4e-79 300.1 164 84.8
HanXRQChr01g0017351 Helianthus annuus HOM05D005285 ORTHO05D006829 1.4e-76 290.8 179 74.9
TPR.G21746 Trifolium pratense HOM05D005285 ORTHO05D006829 7.0e-71 271.9 185 70.8
Ca_24079_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 5.5e-68 262.3 354 42.9
Cpa.g.sc2760.1 Carica papaya HOM05D005285 ORTHO05D006829 1.0e-58 231.5 178 61.8
Rhsim06G0016300 Rhododendron simsii HOM05D005285 ORTHO05D006829 9.8e-57 224.9 118 92.4
Peaxi162Scf00451g00621 Petunia axillaris HOM05D005285 ORTHO05D006829 4.2e-52 209.5 170 63.5
HanXRQChr11g0330601 Helianthus annuus HOM05D005285 ORTHO05D006829 5.9e-46 189.1 106 80.2
Actinidia21565 Actinidia chinensis HOM05D005285 ORTHO05D006829 2.2e-40 170.6 107 80.4
Oeu039103.1 Olea europaea HOM05D005285 ORTHO05D008854 2.0e-38 164.1 90 86.7
Oeu039101.1 Olea europaea HOM05D000288 ORTHO05D000173 2.5e-28 130.6 90 73.3
Atru.ctg794.7 Acer truncatum HOM05D005285 ORTHO05D037890 2.1e-27 127.5 177 43.5
vmacro21176 Vaccinium macrocarpon HOM05D005285 ORTHO05D006829 7.8e-22 109.0 112 56.2
arahy.Tifrunner.gnm1.ann1.J91U4H Arachis hypogaea HOM05D000001 ORTHO05D004533 9.5e-20 102.1 62 72.6
CDE07G0090 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 1.6e-19 101.3 232 30.6
Atru.chr13.2215 Acer truncatum HOM05D005285 ORTHO05D037890 2.1e-19 100.9 55 81.8
TPR.G13313 Trifolium pratense HOM05D005285 ORTHO05D413460 3.1e-18 97.1 77 59.7
Lsat_1_v5_gn_0_6420 Lactuca sativa HOM05D002112 ORTHO05D007960 1.7e-16 91.3 83 56.6
VMungo1127G1344 Vigna mungo HOM05D000839 ORTHO05D000664 4.9e-16 89.7 48 85.4
arahy.Tifrunner.gnm1.ann1.43BKZS Arachis hypogaea HOM05D000001 ORTHO05D000003 1.0e-13 82.0 47 74.5
TPR.G1074 Trifolium pratense HOM05D005285 ORTHO05D411165 5.8e-09 66.2 74 47.3
Lsat_1_v5_gn_9_64201 Lactuca sativa HOM05D000310 ORTHO05D005377 1.6e-06 58.2 32 81.2
arahy.Tifrunner.gnm1.ann1.81AB3J Arachis hypogaea HOM05D000001 ORTHO05D084391 2.7e-06 57.4 43 58.1


User provided reference genes

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