Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.4e-162 576.2 296 100.0
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.8e-141 506.1 301 90.0
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 3.3e-111 405.6 246 83.7
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 3.7e-107 392.1 295 71.2
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 1.9e-106 389.8 247 78.9
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 2.3e-104 382.9 236 80.5
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 5.1e-104 381.7 236 80.5
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 1.1e-103 380.6 236 80.1
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 1.1e-101 374.0 247 77.3
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 2.3e-101 372.9 299 68.6
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 4.0e-101 372.1 272 72.1
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 5.2e-101 371.7 241 77.2
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 5.2e-101 371.7 246 75.6
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 1.5e-100 370.2 297 67.0
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 7.6e-100 367.9 257 75.1
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 1.3e-99 367.1 240 77.1
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 1.7e-99 366.7 236 78.0
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 1.7e-99 366.7 287 68.3
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 4.9e-99 365.2 238 77.7
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 1.4e-98 363.6 249 75.1
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.4e-98 363.6 295 68.8
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 1.9e-98 363.2 295 65.4
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.4e-98 362.8 295 68.8
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 4.1e-98 362.1 293 66.9
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 5.4e-98 361.7 296 66.6
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 7.1e-98 361.3 242 75.6
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 9.2e-98 360.9 238 76.5
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 9.2e-98 360.9 241 74.7
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 1.2e-97 360.5 247 72.5
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 1.2e-97 360.5 254 73.6
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 1.2e-97 360.5 247 76.1
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 2.7e-97 359.4 269 68.0
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 6.0e-97 358.2 237 77.6
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 6.0e-97 358.2 249 71.9
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 1.0e-96 357.5 242 74.4
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 1.7e-96 356.7 293 65.2
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 1.7e-96 356.7 293 66.2
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 2.3e-96 356.3 235 75.7
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 2.3e-96 356.3 288 64.6
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 3.0e-96 355.9 241 75.9
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 3.9e-96 355.5 239 74.1
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 5.1e-96 355.1 289 68.5
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 5.1e-96 355.1 289 68.5
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 5.1e-96 355.1 241 74.3
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 1.1e-95 354.0 240 74.6
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 4.3e-95 352.1 239 72.8
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 1.6e-94 350.1 236 71.6
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 1.6e-94 350.1 296 63.9
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 3.6e-94 349.0 252 72.2
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 8.1e-94 347.8 241 71.4
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 3.1e-93 345.9 234 74.8
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 8.9e-93 344.4 242 72.7
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.5e-92 343.6 232 76.3
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 3.4e-92 342.4 294 62.2
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 4.4e-92 342.0 240 73.3
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 2.2e-91 339.7 253 70.0
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 2.2e-91 339.7 253 70.0
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 3.8e-91 339.0 258 67.4
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 4.9e-91 338.6 232 73.7
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 2.4e-90 336.3 235 73.2
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 3.2e-90 335.9 289 64.4
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 5.4e-90 335.1 235 72.3
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 5.4e-90 335.1 232 74.1
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 1.2e-89 334.0 270 67.4
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 2.1e-89 333.2 235 71.1
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 1.7e-88 330.1 305 60.7
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 2.3e-88 329.7 235 71.5
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 6.6e-88 328.2 235 70.6
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 5.6e-87 325.1 243 68.7
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 7.3e-87 324.7 238 71.8
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 1.3e-86 323.9 252 67.1
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 1.3e-86 323.9 238 71.0
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 2.1e-86 323.2 229 68.6
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 2.8e-86 322.8 238 71.4
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 3.6e-86 322.4 223 73.5
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 6.2e-86 321.6 238 68.9
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 6.2e-86 321.6 219 76.3
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 1.1e-85 320.9 248 69.0
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 2.2e-83 313.2 223 70.0
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 1.9e-82 310.1 218 72.9
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 1.9e-82 310.1 218 72.9
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 2.7e-81 306.2 237 63.7
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 1.0e-80 304.3 273 63.0
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 1.3e-80 303.9 230 67.0
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 1.8e-80 303.5 273 62.6
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 2.3e-80 303.1 235 64.7
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 3.0e-80 302.8 203 75.9
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 5.6e-79 298.5 300 59.0
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 2.1e-78 296.6 255 63.5
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 4.6e-73 278.9 234 62.8
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 3.0e-72 276.2 218 67.4
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 5.1e-72 275.4 233 60.9
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 4.8e-70 268.9 195 70.3
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 9.0e-69 264.6 191 72.8
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 2.5e-66 256.5 228 61.8
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 7.6e-60 235.0 240 55.4
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 2.9e-59 233.0 246 50.8
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 9.3e-58 228.0 228 53.1
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.8e-56 223.8 295 49.8
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 8.2e-54 214.9 241 45.2
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.8e-45 187.2 135 69.6
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 2.9e-43 179.9 236 39.8
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 1.8e-40 170.6 228 39.0
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 7.0e-37 158.7 193 48.7
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 3.8e-35 152.9 270 36.3
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 1.5e-31 141.0 89 74.2
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 1.3e-30 137.9 226 41.2
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 2.2e-22 110.5 110 50.9
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.1e-18 98.2 84 57.1
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 2.6e-15 87.0 61 72.1
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 3.7e-14 83.2 49 75.5
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 5.0e-11 72.8 103 46.6
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 1.6e-09 67.8 70 52.9
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 1.6e-09 67.8 70 52.9
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 2.1e-09 67.4 70 52.9
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 2.3e-08 63.9 47 59.6
Rhsim03G0260900 Rhododendron simsii HOM05D021265 ORTHO05D339689 6.8e-08 62.4 67 49.3
Rhsim06G0079000 Rhododendron simsii HOM05D021265 ORTHO05D338543 2.0e-07 60.8 54 63.0


User provided reference genes

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