Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013246 Camellia sinensis var. sinensis HOM05D002870 ORTHO05D043308 2.2e-40 168.3 74 100.0
CSS0039669 Camellia sinensis var. sinensis HOM05D002870 ORTHO05D043308 1.2e-38 162.5 74 97.3
vmacro12028 Vaccinium macrocarpon HOM05D002870 ORTHO05D003241 2.8e-11 71.6 35 85.7
CSS0027530 Camellia sinensis var. sinensis HOM05D002870 ORTHO05D003241 1.1e-10 69.7 34 85.3
Dinv26639 Davidia involucrata HOM05D002870 ORTHO05D003241 1.1e-10 69.7 34 85.3
Rhsim06G0183700 Rhododendron simsii HOM05D002870 ORTHO05D003241 1.4e-10 69.3 39 74.4
MBI16_g18970_MAGBIO Magnolia biondii HOM05D002870 ORTHO05D003241 1.8e-10 68.9 35 80.0
Actinidia20595 Actinidia chinensis HOM05D002870 ORTHO05D003241 4.0e-10 67.8 34 82.4
Cc05_g10040 Coffea canephora HOM05D002870 ORTHO05D003241 5.3e-10 67.4 34 82.4
Peaxi162Scf00111g00628 Petunia axillaris HOM05D002870 ORTHO05D003241 5.3e-10 67.4 34 82.4
MSTRG.12854 Avicennia marina HOM05D002870 ORTHO05D003241 6.9e-10 67.0 34 82.4
MBI03_g18945_MAGBIO Magnolia biondii HOM05D002870 ORTHO05D003241 9.0e-10 66.6 35 77.1
CSS0034829 Camellia sinensis var. sinensis HOM05D002870 ORTHO05D003241 1.2e-09 66.2 34 79.4
CSS0048151 Camellia sinensis var. sinensis HOM05D002870 ORTHO05D003241 1.2e-09 66.2 34 79.4
Migut.H02060 Erythranthe guttata HOM05D002870 ORTHO05D003241 1.5e-09 65.9 34 79.4
HanXRQChr09g0257511 Helianthus annuus HOM05D002870 ORTHO05D003241 1.5e-09 65.9 34 79.4
SalBow7G3978 Salvia bowleyana HOM05D002870 ORTHO05D003241 1.5e-09 65.9 34 76.5
SalBow7G4695 Salvia bowleyana HOM05D002870 ORTHO05D003241 1.5e-09 65.9 34 76.5
CANSAT56G2737 Cannabis sativa HOM05D002870 ORTHO05D003241 3.4e-09 64.7 31 80.6
PSO675G5265 Papaver somniferum HOM05D002870 ORTHO05D003241 4.5e-09 64.3 34 79.4
Ciclev10019948m.g Citrus clementina HOM05D002870 ORTHO05D003241 5.8e-09 63.9 34 76.5
SGA_v2.0_scaffold130G34240 Striga asiatica HOM05D002870 ORTHO05D003241 5.8e-09 63.9 34 76.5
Actinidia12331 Actinidia chinensis HOM05D002870 ORTHO05D003241 7.6e-09 63.5 32 78.1
Aqoxy1G01676 Aquilegia oxysepala HOM05D002870 ORTHO05D003241 7.6e-09 63.5 34 79.4
Nitab4.5_0001612g0070 Nicotiana tabacum HOM05D002870 ORTHO05D003241 7.6e-09 63.5 34 76.5
Nitab4.5_0004166g0010 Nicotiana tabacum HOM05D002870 ORTHO05D003241 7.6e-09 63.5 34 76.5
Solyc07g056390.4 Solanum lycopersicum HOM05D002870 ORTHO05D003241 7.6e-09 63.5 34 76.5
Sopen07g029760 Solanum pennellii HOM05D002870 ORTHO05D003241 7.6e-09 63.5 34 76.5
PGSC0003DMG400031102 Solanum tuberosum HOM05D002870 ORTHO05D003241 7.6e-09 63.5 34 76.5
CAN.G585.1 Capsicum annuum HOM05D002870 ORTHO05D003241 1.0e-08 63.2 34 76.5
Lalb_Chr19g0133501 Lupinus albus HOM05D002870 ORTHO05D003241 1.3e-08 62.8 33 72.7
MBI03_g28523_MAGBIO Magnolia biondii HOM05D002870 ORTHO05D003241 1.3e-08 62.8 35 74.3
Nn3g20427 Nelumbo nucifera HOM05D002870 ORTHO05D003241 1.3e-08 62.8 34 73.5
ATR0665G063 Amborella trichopoda HOM05D002870 ORTHO05D003241 1.7e-08 62.4 34 70.6
PSO541G4247 Papaver somniferum HOM05D002870 ORTHO05D003241 1.7e-08 62.4 34 76.5
Prupe.4G145500 Prunus persica HOM05D002870 ORTHO05D003241 1.7e-08 62.4 34 73.5
ECA240G4166 Erigeron canadensis HOM05D002870 ORTHO05D003241 2.2e-08 62.0 34 76.5
Lsat_1_v5_gn_9_103381 Lactuca sativa HOM05D002870 ORTHO05D003241 2.2e-08 62.0 34 76.5
Potri.011G139900 Populus trichocarpa HOM05D002870 ORTHO05D003241 2.2e-08 62.0 34 70.6
Hund10319 Selenicereus undatus HOM05D002870 ORTHO05D003241 2.2e-08 62.0 34 73.5
Eucgr.F03193 Eucalyptus grandis HOM05D002870 ORTHO05D003241 2.9e-08 61.6 32 71.9
CANSAT56G1661 Cannabis sativa HOM05D002870 ORTHO05D003241 3.8e-08 61.2 31 77.4
Cpa.g.sc229.6 Carica papaya HOM05D002870 ORTHO05D003241 3.8e-08 61.2 34 70.6
Hma1.2p1_0198F.1_g085490 Hydrangea macrophylla HOM05D002870 ORTHO05D003241 3.8e-08 61.2 34 73.5
Potri.001G436100 Populus trichocarpa HOM05D002870 ORTHO05D003241 3.8e-08 61.2 34 70.6
RcHm_v2.0_Chr5g0027151 Rosa chinensis HOM05D002870 ORTHO05D003241 4.9e-08 60.8 34 70.6
SalBow6G5801 Salvia bowleyana HOM05D002870 ORTHO05D003241 4.9e-08 60.8 34 70.6
Sc03g0007830 Simmondsia chinensis HOM05D002870 ORTHO05D003241 4.9e-08 60.8 33 75.8
HPP92_018505 Vanilla planifolia HOM05D002870 ORTHO05D003241 4.9e-08 60.8 34 73.5
Os03g0733800 Oryza sativa ssp. japonica HOM05D002870 ORTHO05D003241 6.5e-08 60.5 33 69.7
Zm00001eb056320 Zea mays HOM05D002870 ORTHO05D003241 6.5e-08 60.5 33 69.7
EL10Ac3g06812 Beta vulgaris HOM05D002870 ORTHO05D003241 8.4e-08 60.1 40 62.5
HanXRQChr13g0389791 Helianthus annuus HOM05D002870 ORTHO05D003241 8.4e-08 60.1 33 75.8
RcHm_v2.0_Chr5g0027131 Rosa chinensis HOM05D002870 ORTHO05D003241 8.4e-08 60.1 34 70.6
Sabra16G0290200 Salix brachista HOM05D002870 ORTHO05D003241 8.4e-08 60.1 34 67.6
Duzib192G0466 Durio zibethinus HOM05D002870 ORTHO05D003241 1.1e-07 59.7 34 70.6
AUR62013963 Chenopodium quinoa HOM05D002870 ORTHO05D003241 1.4e-07 59.3 38 65.8
RcHm_v2.0_Chr5g0027251 Rosa chinensis HOM05D002870 ORTHO05D003241 1.4e-07 59.3 31 74.2
Sabra11G0126000 Salix brachista HOM05D002870 ORTHO05D003241 1.4e-07 59.3 34 64.7
HPP92_015880 Vanilla planifolia HOM05D002870 ORTHO05D003241 1.4e-07 59.3 34 70.6
AUR62019652 Chenopodium quinoa HOM05D002870 ORTHO05D003241 2.5e-07 58.5 39 59.0
Thecc.06G146800 Theobroma cacao HOM05D002870 ORTHO05D003241 2.5e-07 58.5 34 67.6
BcaC02g12013 Brassica carinata HOM05D002870 ORTHO05D003241 3.2e-07 58.2 36 61.1
A05p07240 Brassica napus HOM05D002870 ORTHO05D003241 3.2e-07 58.2 36 61.1
C04p08700 Brassica napus HOM05D002870 ORTHO05D003241 3.2e-07 58.2 36 61.1
BolC4t22462H Brassica oleracea HOM05D002870 ORTHO05D003241 3.2e-07 58.2 36 61.1
BraA05t19689Z Brassica rapa HOM05D002870 ORTHO05D003241 3.2e-07 58.2 36 61.1
CARHR133700 Cardamine hirsuta HOM05D002870 ORTHO05D003241 3.2e-07 58.2 36 61.1
Hund21550 Selenicereus undatus HOM05D002870 ORTHO05D003241 3.2e-07 58.2 32 71.9
CiPaw.10G089800 Carya illinoinensis HOM05D002870 ORTHO05D003241 4.2e-07 57.8 31 74.2
Nitab4.5_0009731g0010 Nicotiana tabacum HOM05D002870 ORTHO05D003241 4.2e-07 57.8 31 67.7
BcaB02g09170 Brassica carinata HOM05D002870 ORTHO05D003241 5.5e-07 57.4 38 57.9
Carub.0004s2099 Capsella rubella HOM05D002870 ORTHO05D003241 5.5e-07 57.4 36 61.1
COL.COLO4_31032 Corchorus olitorius HOM05D002870 ORTHO05D003241 5.5e-07 57.4 34 67.6
Gohir.A05G146900 Gossypium hirsutum HOM05D002870 ORTHO05D003241 5.5e-07 57.4 34 64.7
Gohir.D05G149400 Gossypium hirsutum HOM05D002870 ORTHO05D003241 5.5e-07 57.4 34 64.7
Gorai.009G153400 Gossypium raimondii HOM05D002870 ORTHO05D003241 5.5e-07 57.4 34 64.7
Lsat_1_v5_gn_7_99481 Lactuca sativa HOM05D002870 ORTHO05D003241 5.5e-07 57.4 34 61.8
Sabra16G0291300 Salix brachista HOM05D002870 ORTHO05D003241 5.5e-07 57.4 34 64.7
TWI53G0974 Tripterygium wilfordii HOM05D002870 ORTHO05D003241 5.5e-07 57.4 34 67.6
Ah.06g187400 Amaranthus hybridus HOM05D002870 ORTHO05D003241 7.1e-07 57.0 33 72.7
CDE06G0487 Ceratophyllum demersum HOM05D002870 ORTHO05D003241 7.1e-07 57.0 34 61.8
QL05p055495 Quercus lobata HOM05D002870 ORTHO05D003241 7.1e-07 57.0 31 74.2
TWI09G1176 Tripterygium wilfordii HOM05D002870 ORTHO05D003241 7.1e-07 57.0 34 67.6
EL10Ac4g08526 Beta vulgaris HOM05D002870 ORTHO05D003241 9.3e-07 56.6 36 63.9
Atru.chr2.1829 Acer truncatum HOM05D002870 ORTHO05D003241 1.2e-06 56.2 34 67.6
DCAR_021067 Daucus carota HOM05D002870 ORTHO05D003241 1.2e-06 56.2 33 63.6
DCAR_021069 Daucus carota HOM05D002870 ORTHO05D003241 1.2e-06 56.2 33 63.6
MD05G1280900 Malus domestica HOM05D002870 ORTHO05D003241 1.2e-06 56.2 34 64.7
Prupe.4G084000 Prunus persica HOM05D002870 ORTHO05D003241 1.2e-06 56.2 34 64.7
Sp4g21330 Schrenkiella parvula HOM05D002870 ORTHO05D003241 1.2e-06 56.2 36 58.3
CiPaw.09G121100 Carya illinoinensis HOM05D002870 ORTHO05D003241 1.6e-06 55.8 31 71.0
RcHm_v2.0_Chr5g0014551 Rosa chinensis HOM05D002870 ORTHO05D003241 1.6e-06 55.8 33 66.7
SGA_v2.0_scaffold51G18638 Striga asiatica HOM05D002870 ORTHO05D003241 1.6e-06 55.8 31 64.5
Atru.chr10.1158 Acer truncatum HOM05D002870 ORTHO05D003241 2.1e-06 55.5 34 61.8
Aa31LG4G2640 Aethionema arabicum HOM05D002870 ORTHO05D003241 2.1e-06 55.5 33 63.6
CARHR065120 Cardamine hirsuta HOM05D002870 ORTHO05D003241 2.1e-06 55.5 33 66.7
GSVIVG01021532001 Vitis vinifera HOM05D002870 ORTHO05D003241 2.1e-06 55.5 34 61.8
Cfa000918 Carpinus fangiana HOM05D002870 ORTHO05D003241 2.7e-06 55.1 31 71.0
Haze_05638 Corylus avellana HOM05D002870 ORTHO05D003241 2.7e-06 55.1 31 71.0
Peaxi162Scf00045g02438 Petunia axillaris HOM05D002870 ORTHO05D003241 2.7e-06 55.1 31 67.7
AT2G38960 Arabidopsis thaliana HOM05D002870 ORTHO05D003241 3.5e-06 54.7 36 58.3
Ciclev10015325m.g Citrus clementina HOM05D002870 ORTHO05D003241 3.5e-06 54.7 31 64.5
Thhalv10018491m.g Eutrema salsugineum HOM05D002870 ORTHO05D003241 3.5e-06 54.7 34 61.8
MD10G1259300 Malus domestica HOM05D002870 ORTHO05D003241 3.5e-06 54.7 34 64.7
Nitab4.5_0001594g0070 Nicotiana tabacum HOM05D002870 ORTHO05D003241 3.5e-06 54.7 31 64.5
PGR083G1793 Punica granatum HOM05D002870 ORTHO05D003241 3.5e-06 54.7 33 60.6
GSVIVG01020501001 Vitis vinifera HOM05D002870 ORTHO05D003241 3.5e-06 54.7 34 73.5
AL4G36270 Arabidopsis lyrata HOM05D002870 ORTHO05D003241 4.6e-06 54.3 36 58.3
BcaB03g14971 Brassica carinata HOM05D002870 ORTHO05D003241 4.6e-06 54.3 33 63.6
BcaC08g46674 Brassica carinata HOM05D002870 ORTHO05D003241 4.6e-06 54.3 33 63.6
A07p38400 Brassica napus HOM05D002870 ORTHO05D003241 4.6e-06 54.3 33 63.6
C06p46490 Brassica napus HOM05D002870 ORTHO05D003241 4.6e-06 54.3 33 63.6
BolC6t39695H Brassica oleracea HOM05D002870 ORTHO05D003241 4.6e-06 54.3 33 63.6
BraA07t31401Z Brassica rapa HOM05D002870 ORTHO05D003241 4.6e-06 54.3 33 63.6
Duzib235G0832 Durio zibethinus HOM05D002870 ORTHO05D003241 4.6e-06 54.3 35 60.0
Eucgr.D00278 Eucalyptus grandis HOM05D002870 ORTHO05D003241 4.6e-06 54.3 34 58.8
Glyma.09G086800 Glycine max HOM05D002870 ORTHO05D003241 4.6e-06 54.3 31 67.7
Glyma.15G194900 Glycine max HOM05D002870 ORTHO05D003241 4.6e-06 54.3 31 67.7
Gohir.D06G143800 Gossypium hirsutum HOM05D002870 ORTHO05D003241 4.6e-06 54.3 31 64.5
Gorai.010G167600 Gossypium raimondii HOM05D002870 ORTHO05D003241 4.6e-06 54.3 31 64.5
CDE07G2073 Ceratophyllum demersum HOM05D002870 ORTHO05D003241 6.0e-06 53.9 38 55.3
THA.LOC104812282 Tarenaya hassleriana HOM05D002870 ORTHO05D003241 6.0e-06 53.9 33 66.7
Carub.0002s1908 Capsella rubella HOM05D002870 ORTHO05D003241 7.9e-06 53.5 31 64.5
Thhalv10016606m.g Eutrema salsugineum HOM05D002870 ORTHO05D003241 7.9e-06 53.5 36 52.8
Sed0003019 Sechium edule HOM05D002870 ORTHO05D003241 7.9e-06 53.5 34 61.8
Sed0023606 Sechium edule HOM05D002870 ORTHO05D003241 7.9e-06 53.5 34 61.8


User provided reference genes

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