Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013208 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.5e-152 542.7 263 100.0
CSS0009810 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.5e-107 392.5 261 78.9
CSS0026212 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.7e-101 372.5 260 76.9
CSS0042483 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.4e-97 359.4 255 76.1
CSS0007712 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 6.5e-95 351.3 252 76.2
CSS0000180 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 5.7e-91 338.2 247 74.1
CSS0005105 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.5e-38 163.3 126 62.7
CSS0026970 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.5e-38 163.3 143 56.6
CSS0037888 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.5e-38 163.3 126 62.7
CSS0039716 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 3.6e-37 159.5 126 61.1
RcHm_v2.0_Chr4g0402051 Rosa chinensis HOM05D000791 ORTHO05D000669 6.6e-23 112.1 227 30.4
Rhsim03G0202300 Rhododendron simsii HOM05D017301 ORTHO05D000669 2.3e-15 87.0 230 29.6
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.1e-15 85.9 231 26.8
MBI15_g13723_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.3e-14 83.2 226 27.4
MBI15_g15098_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.4e-14 82.0 234 28.2
MBI02_g29975_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.6e-14 81.6 234 26.1
Dinv01181 Davidia involucrata HOM05D000791 ORTHO05D000669 1.3e-13 81.3 225 25.3
MBI09_g39165_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.6e-13 80.9 231 26.0
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.6e-13 80.9 231 26.4
PGR004G1992 Punica granatum HOM05D000791 ORTHO05D000669 3.7e-13 79.7 240 29.2
Dinv31455 Davidia involucrata HOM05D000791 ORTHO05D000669 4.8e-13 79.3 234 26.1
FAN10G2090 Fragaria x ananassa HOM05D008705 ORTHO05D000669 2.4e-12 77.0 225 26.2
FAN10G3855 Fragaria x ananassa HOM05D008705 ORTHO05D000669 2.4e-12 77.0 225 26.2
vmacro01281 Vaccinium macrocarpon HOM05D017301 ORTHO05D000669 3.1e-12 76.6 180 30.6
MBI16_g34343_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.3e-12 75.9 241 24.9
FAN09G3738 Fragaria x ananassa HOM05D008705 ORTHO05D001863 7.6e-11 72.0 221 24.9
FAN20G1055 Fragaria x ananassa HOM05D008705 ORTHO05D001863 1.7e-10 70.9 225 27.6
FvH4_3g22812 Fragaria vesca HOM05D023520 ORTHO05D025365 2.2e-10 70.5 119 28.6
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.8e-10 69.7 227 26.0
CSS0028785 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 8.4e-10 68.6 63 55.6
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 1.1e-09 68.2 237 23.2
CSS0034948 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.9e-09 67.4 62 56.5
Dinv18594 Davidia involucrata HOM05D000791 ORTHO05D000669 2.4e-09 67.0 250 24.8
Dinv24767 Davidia involucrata HOM05D000791 ORTHO05D000669 3.2e-09 66.6 203 26.1
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 5.5e-09 65.9 226 27.0
Dinv16095 Davidia involucrata HOM05D000791 ORTHO05D000669 7.1e-09 65.5 204 26.0
MBI17_g17142_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.3e-09 65.1 231 25.5
RcHm_v2.0_Chr4g0385011 Rosa chinensis HOM05D008705 ORTHO05D000669 9.3e-09 65.1 236 24.2
FAN20G2701 Fragaria x ananassa HOM05D008705 ORTHO05D000669 1.6e-08 64.3 137 27.0
CiPaw.14G126400 Carya illinoinensis HOM05D003120 ORTHO05D003568 2.7e-08 63.5 198 26.8
MBI07_g03727_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.0e-07 61.6 202 24.3
MBI18_g32090_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.8e-07 60.8 209 24.4
FvH4_4g05492 Fragaria vesca HOM05D008705 ORTHO05D000669 3.0e-07 60.1 137 26.3
Cfa009670 Carpinus fangiana HOM05D003120 ORTHO05D003568 3.9e-07 59.7 203 25.6
Dinv12412 Davidia involucrata HOM05D010418 ORTHO05D000669 3.9e-07 59.7 123 27.6
FvH4_2g08145 Fragaria vesca HOM05D008705 ORTHO05D000669 3.9e-07 59.7 137 26.3
FAN17G1365 Fragaria x ananassa HOM05D008705 ORTHO05D000669 3.9e-07 59.7 228 24.6
RcHm_v2.0_Chr2g0106131 Rosa chinensis HOM05D008705 ORTHO05D000669 3.9e-07 59.7 97 36.1
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 6.7e-07 58.9 206 26.2
Rhsim02G0136200 Rhododendron simsii HOM05D017301 ORTHO05D000669 6.7e-07 58.9 77 37.7
RcHm_v2.0_Chr3g0476041 Rosa chinensis HOM05D008705 ORTHO05D000669 1.1e-06 58.2 75 38.7
MBI07_g18981_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.5e-06 57.8 212 25.9
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.9e-06 57.4 239 24.7
MBI14_g01383_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.5e-06 57.0 212 25.0
MBI14_g38483_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.3e-06 56.2 222 23.9
FAN15G0639 Fragaria x ananassa HOM05D008705 ORTHO05D000669 5.6e-06 55.8 144 26.4
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 5.6e-06 55.8 227 24.2
Migut.I00328 Erythranthe guttata HOM05D023261 ORTHO05D000222 7.4e-06 55.5 229 24.5
RcHm_v2.0_Chr1g0381191 Rosa chinensis HOM05D008705 ORTHO05D000669 7.4e-06 55.5 180 23.3
Dinv02106 Davidia involucrata HOM05D000791 ORTHO05D000669 9.6e-06 55.1 161 24.2
MBI09_g18479_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.6e-06 55.1 225 25.3


User provided reference genes

Program Settings