Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013202 Camellia sinensis var. sinensis HOM05D005920 ORTHO05D007211 3.7e-70 268.1 136 100.0
Dinv07224 Davidia involucrata HOM05D005920 ORTHO05D007211 1.1e-26 123.6 89 73.0
vmacro00831 Vaccinium macrocarpon HOM05D005920 ORTHO05D007211 1.5e-26 123.2 89 75.3
Actinidia29463 Actinidia chinensis HOM05D005920 ORTHO05D007211 3.7e-25 118.6 89 76.4
Hma1.2p1_0186F.1_g081770 Hydrangea macrophylla HOM05D005920 ORTHO05D007211 2.4e-24 115.9 89 67.4
TAR376G1095 Trochodendron aralioides HOM05D005920 ORTHO05D007211 1.5e-18 96.7 88 60.2
Nn1g08776 Nelumbo nucifera HOM05D005920 ORTHO05D007211 8.2e-17 90.9 91 54.9
CiPaw.06G030600 Carya illinoinensis HOM05D005920 ORTHO05D007211 1.1e-16 90.5 84 57.1
Nn1g08784 Nelumbo nucifera HOM05D005920 ORTHO05D007211 1.8e-16 89.7 88 55.7
Lj4A625G9 Lonicera japonica HOM05D005920 ORTHO05D007211 4.1e-16 88.6 77 66.2
TWI56G1135 Tripterygium wilfordii HOM05D005920 ORTHO05D007211 6.9e-16 87.8 88 54.5
Ciclev10001211m.g Citrus clementina HOM05D005920 ORTHO05D007211 2.0e-15 86.3 89 56.2
Thecc.08G124700 Theobroma cacao HOM05D005920 ORTHO05D007211 3.4e-15 85.5 86 55.8
Nitab4.5_0001273g0050 Nicotiana tabacum HOM05D005920 ORTHO05D007211 2.2e-14 82.8 88 51.1
Duzib093G1431 Durio zibethinus HOM05D005920 ORTHO05D007211 3.8e-14 82.0 86 53.5
QL09p034934 Quercus lobata HOM05D005920 ORTHO05D007211 3.8e-14 82.0 89 50.6
Cc10_g11840 Coffea canephora HOM05D005920 ORTHO05D007211 6.5e-14 81.3 85 52.9
Gohir.D06G045000 Gossypium hirsutum HOM05D005920 ORTHO05D007211 6.5e-14 81.3 86 52.3
Gorai.010G050100 Gossypium raimondii HOM05D005920 ORTHO05D007211 6.5e-14 81.3 86 52.3
Prupe.1G499100 Prunus persica HOM05D005920 ORTHO05D007211 1.9e-13 79.7 83 51.8
CAN.G127.17 Capsicum annuum HOM05D005920 ORTHO05D007211 2.5e-13 79.3 90 52.2
Atru.chr13.1453_Atru.chr13.1454 Acer truncatum HOM05D005920 ORTHO05D007211 7.2e-13 77.8 88 51.1
Atru.chr13.1476_Atru.chr13.1477 Acer truncatum HOM05D005920 ORTHO05D007211 7.2e-13 77.8 88 51.1
Manes.18G076800 Manihot esculenta HOM05D005920 ORTHO05D007211 7.2e-13 77.8 89 51.7
Solyc11g012900.3 Solanum lycopersicum HOM05D005920 ORTHO05D007211 7.2e-13 77.8 78 56.4
Gohir.A06G044066 Gossypium hirsutum HOM05D005920 ORTHO05D007211 9.4e-13 77.4 86 51.2
Gohir.D05G237100 Gossypium hirsutum HOM05D005920 ORTHO05D007211 9.4e-13 77.4 90 50.0
Gorai.009G245500 Gossypium raimondii HOM05D005920 ORTHO05D007211 1.2e-12 77.0 90 48.9
PSO528G0030 Papaver somniferum HOM05D005920 ORTHO05D007211 1.2e-12 77.0 89 47.2
Gohir.A05G234800 Gossypium hirsutum HOM05D005920 ORTHO05D007211 1.6e-12 76.6 90 50.0
Sopen11g007640 Solanum pennellii HOM05D005920 ORTHO05D007211 3.6e-12 75.5 78 55.1
COL.COLO4_35924 Corchorus olitorius HOM05D005920 ORTHO05D007211 4.7e-12 75.1 88 48.9
Nitab4.5_0001803g0120 Nicotiana tabacum HOM05D005920 ORTHO05D007211 4.7e-12 75.1 88 46.6
CANSAT25G3381 Cannabis sativa HOM05D005920 ORTHO05D007211 1.8e-11 73.2 88 46.6
VMungo0647G0482 Vigna mungo HOM05D005920 ORTHO05D007211 8.8e-11 70.9 90 48.9
Oeu017295.1 Olea europaea HOM05D005920 ORTHO05D007211 1.5e-10 70.1 82 50.0
Potri.005G177400 Populus trichocarpa HOM05D005920 ORTHO05D007211 1.5e-10 70.1 79 51.9
Glyma.13G080100 Glycine max HOM05D005920 ORTHO05D007211 2.0e-10 69.7 90 50.0
Glyma.14G149300 Glycine max HOM05D005920 ORTHO05D007211 2.6e-10 69.3 90 51.1
Hund26813 Selenicereus undatus HOM05D005920 ORTHO05D007211 1.7e-09 66.6 73 49.3
Sc02g0006050 Simmondsia chinensis HOM05D005920 ORTHO05D007211 1.7e-09 66.6 82 46.3
Sabra05G0133900 Salix brachista HOM05D005920 ORTHO05D007211 2.2e-09 66.2 79 48.1
Psat6g041000 Pisum sativum HOM05D005920 ORTHO05D007211 2.8e-09 65.9 86 44.2
RcHm_v2.0_Chr6g0295691 Rosa chinensis HOM05D005920 ORTHO05D007211 2.8e-09 65.9 89 41.6
SalBow7G4584 Salvia bowleyana HOM05D000555 ORTHO05D007211 3.7e-09 65.5 107 43.0
Aqoxy6G00210 Aquilegia oxysepala HOM05D005920 ORTHO05D007211 4.8e-09 65.1 87 44.8
Migut.C01133 Erythranthe guttata HOM05D005920 ORTHO05D007211 8.2e-09 64.3 106 37.7
Lj1g0027048 Lotus japonicus HOM05D005920 ORTHO05D007211 8.2e-09 64.3 91 46.2
Aa31LG9G14240 Aethionema arabicum HOM05D005920 ORTHO05D007211 1.1e-08 63.9 88 44.3
DCAR_014089 Daucus carota HOM05D005920 ORTHO05D007211 1.1e-08 63.9 90 45.6
THA.LOC104817311 Tarenaya hassleriana HOM05D005920 ORTHO05D007211 1.1e-08 63.9 90 45.6
HPP92_011946 Vanilla planifolia HOM05D005920 ORTHO05D007211 1.1e-08 63.9 81 45.7
Actinidia03473 Actinidia chinensis HOM05D005920 ORTHO05D007211 1.4e-08 63.5 32 90.6
ATR0584G080 Amborella trichopoda HOM05D005920 ORTHO05D007211 1.4e-08 63.5 88 42.0
Eucgr.F03788 Eucalyptus grandis HOM05D005920 ORTHO05D007211 1.4e-08 63.5 86 43.0
arahy.Tifrunner.gnm1.ann1.QU4SLQ Arachis hypogaea HOM05D005920 ORTHO05D007211 2.4e-08 62.8 86 45.3
MD15G1349900 Malus domestica HOM05D005920 ORTHO05D007211 4.1e-08 62.0 83 43.4
Lsat_1_v5_gn_6_112921 Lactuca sativa HOM05D005920 ORTHO05D007211 5.3e-08 61.6 88 47.7
arahy.Tifrunner.gnm1.ann1.GZGN8Y Arachis hypogaea HOM05D005920 ORTHO05D007211 7.0e-08 61.2 102 40.2
MSTRG.1445 Avicennia marina HOM05D005920 ORTHO05D007211 2.0e-07 59.7 71 49.3
EL10Ac1g01005 Beta vulgaris HOM05D005920 ORTHO05D007211 3.4e-07 58.9 96 37.5
Lalb_Chr10g0101741 Lupinus albus HOM05D005920 ORTHO05D007211 7.7e-07 57.8 96 38.5
Medtr1g030300 Medicago truncatula HOM05D005920 ORTHO05D007211 7.7e-07 57.8 89 46.1
AUR62014341 Chenopodium quinoa HOM05D005920 ORTHO05D007211 1.0e-06 57.4 62 46.8
FAN20G1415 Fragaria x ananassa HOM05D005920 ORTHO05D007211 1.0e-06 57.4 93 38.7
AUR62019083 Chenopodium quinoa HOM05D005920 ORTHO05D007211 1.3e-06 57.0 62 46.8
FvH4_2g26840 Fragaria vesca HOM05D005920 ORTHO05D007211 1.7e-06 56.6 92 38.0
Phvul.008G163200 Phaseolus vulgaris HOM05D005920 ORTHO05D007211 3.8e-06 55.5 52 57.7
CDE09G0226 Ceratophyllum demersum HOM05D005920 ORTHO05D007211 5.0e-06 55.1 51 52.9
SGA_v2.0_scaffold24G10464 Striga asiatica HOM05D005920 ORTHO05D007211 5.0e-06 55.1 49 53.1
TPR.G25796 Trifolium pratense HOM05D005920 ORTHO05D007211 5.0e-06 55.1 78 43.6
FAN27G1284 Fragaria x ananassa HOM05D005920 ORTHO05D007211 6.5e-06 54.7 95 36.8
Sed0014256 Sechium edule HOM05D005920 ORTHO05D007211 6.5e-06 54.7 86 38.4
ClCG11G015770 Citrullus lanatus HOM05D005920 ORTHO05D007211 8.5e-06 54.3 99 35.4
FAN24G1536 Fragaria x ananassa HOM05D005920 ORTHO05D007211 8.5e-06 54.3 93 38.7


User provided reference genes

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