Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 2.8e-106 388.7 198 100.0
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 6.8e-105 384.0 198 99.0
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 3.3e-75 285.4 197 77.2
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 5.6e-75 284.6 198 75.3
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 7.3e-75 284.3 194 76.3
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 1.6e-74 283.1 201 75.6
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 3.6e-74 282.0 193 75.1
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 6.2e-74 281.2 193 74.6
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 1.3e-71 273.5 193 73.6
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 2.9e-71 272.3 191 72.8
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 8.4e-71 270.8 193 71.5
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 2.4e-70 269.2 194 72.2
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 9.3e-70 267.3 200 72.5
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 1.5e-67 260.0 177 76.8
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.5e-67 260.0 192 71.4
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 2.5e-67 259.2 191 68.6
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 3.3e-67 258.8 177 76.8
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 1.6e-66 256.5 194 69.6
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 2.1e-66 256.1 194 65.5
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 4.8e-66 255.0 194 64.9
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 4.8e-66 255.0 162 77.2
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 4.8e-66 255.0 162 80.9
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 6.2e-66 254.6 182 72.5
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 8.1e-66 254.2 199 68.8
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 1.4e-65 253.4 181 70.7
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 1.4e-65 253.4 202 68.8
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 2.4e-65 252.7 181 71.3
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 3.1e-65 252.3 164 76.2
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 5.3e-65 251.5 192 66.1
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 6.9e-65 251.1 196 70.9
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 9.0e-65 250.8 189 71.4
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 9.0e-65 250.8 194 69.6
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 1.5e-64 250.0 186 68.3
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 2.0e-64 249.6 195 67.7
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 2.2e-63 246.1 194 66.5
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 2.9e-63 245.7 194 66.0
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 4.9e-63 245.0 206 68.0
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 3.2e-62 242.3 140 83.6
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 5.5e-62 241.5 172 73.8
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 9.3e-62 240.7 214 65.0
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 9.3e-62 240.7 214 64.0
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 2.1e-61 239.6 192 65.1
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 2.1e-61 239.6 164 73.2
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 7.9e-61 237.7 164 72.6
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.3e-60 236.9 195 65.1
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 1.3e-60 236.9 190 65.8
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 1.3e-60 236.9 205 63.9
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.8e-60 236.5 185 66.5
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 2.3e-60 236.1 199 65.8
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 3.0e-60 235.7 163 71.2
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 3.9e-60 235.3 190 65.3
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 3.9e-60 235.3 226 55.8
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 8.7e-60 234.2 226 55.8
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 4.3e-59 231.9 190 65.3
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 4.3e-59 231.9 189 65.1
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 4.3e-59 231.9 153 74.5
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 5.7e-59 231.5 190 65.8
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 5.7e-59 231.5 185 65.9
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 5.7e-59 231.5 180 68.3
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 1.3e-58 230.3 189 65.1
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.3e-58 230.3 180 68.3
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 4.8e-58 228.4 224 58.5
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 6.3e-58 228.0 162 71.6
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 8.2e-58 227.6 190 65.3
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 8.2e-58 227.6 175 70.9
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 1.1e-57 227.3 189 65.1
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 1.1e-57 227.3 145 77.9
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 1.1e-57 227.3 194 62.9
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 1.4e-57 226.9 152 75.0
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 1.8e-57 226.5 144 79.9
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 2.4e-57 226.1 147 76.9
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 4.1e-57 225.3 153 73.2
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 6.9e-57 224.6 227 56.8
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 1.5e-56 223.4 190 64.2
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 5.9e-56 221.5 190 63.7
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 1.0e-55 220.7 172 66.3
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 1.7e-55 219.9 181 68.0
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 3.8e-55 218.8 165 66.1
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 4.2e-54 215.3 192 63.5
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 9.3e-54 214.2 152 71.7
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 1.6e-53 213.4 140 76.4
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 1.6e-53 213.4 140 76.4
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 2.1e-53 213.0 139 74.8
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 7.9e-53 211.1 240 55.4
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 7.4e-51 204.5 170 66.5
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 6.3e-50 201.4 124 79.8
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 1.0e-47 194.1 129 71.3
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 2.2e-47 193.0 131 71.8
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 3.2e-46 189.1 197 57.4
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 8.8e-44 181.0 171 58.5
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 4.3e-43 178.7 100 90.0
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 7.4e-43 177.9 121 71.1
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 4.8e-42 175.3 200 55.0
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 2.4e-41 172.9 194 54.1
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 4.1e-41 172.2 122 73.8
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 6.9e-41 171.4 100 86.0
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 2.2e-39 166.4 101 80.2
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 9.4e-38 161.0 97 82.5
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 2.1e-37 159.8 172 54.7
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 2.1e-37 159.8 103 78.6
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 3.6e-37 159.1 219 45.2
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 9.1e-33 144.4 103 69.9
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 9.1e-33 144.4 117 64.1
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 5.0e-31 138.7 127 52.0
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 1.2e-29 134.0 152 48.7
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 5.2e-28 128.6 79 81.0
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 3.7e-26 122.5 93 68.8
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 3.1e-25 119.4 71 87.3
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 3.1e-25 119.4 71 87.3
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 7.0e-25 118.2 75 76.0
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 1.6e-24 117.1 135 51.9
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 8.5e-23 111.3 63 84.1
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 5.5e-22 108.6 111 55.0
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 2.7e-16 89.7 109 37.6
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 6.3e-10 68.6 39 82.1
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 6.3e-10 68.6 39 82.1


User provided reference genes

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