Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013150 Camellia sinensis var. sinensis HOM05D007631 ORTHO05D009566 1.2e-26 122.5 62 100.0
Peaxi162Scf00363g00724 Petunia axillaris HOM05D007631 ORTHO05D009566 6.0e-15 83.6 57 75.4
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 1.3e-14 82.4 59 64.4
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 1.3e-14 82.4 57 73.7
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 1.7e-14 82.0 57 71.9
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 1.7e-14 82.0 60 70.0
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 1.7e-14 82.0 57 73.7
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 1.7e-14 82.0 57 73.7
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 2.3e-14 81.6 60 65.0
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 6.6e-14 80.1 57 71.9
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 8.6e-14 79.7 60 66.7
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 1.1e-13 79.3 59 67.8
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.5e-13 79.0 58 65.5
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.5e-13 79.0 58 65.5
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 1.9e-13 78.6 59 62.7
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 1.9e-13 78.6 59 67.8
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 2.5e-13 78.2 59 67.8
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 2.5e-13 78.2 59 67.8
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 3.3e-13 77.8 58 65.5
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 5.6e-13 77.0 57 71.9
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 5.6e-13 77.0 59 64.4
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 7.3e-13 76.6 59 66.1
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 7.3e-13 76.6 57 68.4
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 1.2e-12 75.9 59 64.4
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 1.2e-12 75.9 59 66.1
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 1.6e-12 75.5 57 66.7
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 2.1e-12 75.1 58 65.5
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 2.1e-12 75.1 59 64.4
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 2.1e-12 75.1 59 64.4
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 2.1e-12 75.1 61 59.0
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 2.8e-12 74.7 59 64.4
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 3.6e-12 74.3 57 64.9
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 3.6e-12 74.3 57 63.2
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 8.1e-12 73.2 60 61.7
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 1.1e-11 72.8 59 61.0
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 1.4e-11 72.4 57 61.4
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 1.4e-11 72.4 60 60.0
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 1.4e-11 72.4 61 60.7
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 1.4e-11 72.4 57 63.2
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 3.1e-11 71.2 59 59.3
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 4.0e-11 70.9 57 61.4
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 4.0e-11 70.9 57 61.4
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 4.0e-11 70.9 57 61.4
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 4.0e-11 70.9 57 61.4
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 4.0e-11 70.9 57 61.4
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 4.0e-11 70.9 59 57.6
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 4.0e-11 70.9 57 61.4
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 4.0e-11 70.9 61 60.7
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 4.0e-11 70.9 57 61.4
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 4.0e-11 70.9 59 59.3
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 5.2e-11 70.5 57 59.6
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 6.8e-11 70.1 57 57.9
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 6.8e-11 70.1 60 61.7
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 2.0e-10 68.6 57 61.4
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 2.6e-10 68.2 58 62.1
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 4.4e-10 67.4 59 55.9
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 7.5e-10 66.6 89 42.7
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 1.3e-09 65.9 59 54.2
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 4.9e-09 63.9 62 54.8
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 6.4e-09 63.5 63 50.8
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 1.1e-08 62.8 58 55.2
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 1.4e-08 62.4 61 55.7
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 5.4e-08 60.5 57 57.9
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 9.2e-08 59.7 58 50.0
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 6.0e-07 57.0 58 46.6
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 1.0e-06 56.2 54 50.0
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 1.0e-06 56.2 59 45.8
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 3.9e-06 54.3 32 78.1


User provided reference genes

Program Settings